| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446667
Identifier: 126446667
GI number: 126446667
Start: 1468337
End: 1469524
Strand: Reverse
Name: 126446667
Synonym: BMA10247_A1515
Alternate gene names: NA
Gene position: 1469524-1468337 (Counterclockwise)
Preceding gene: 126446402
Following gene: 126447956
Centisome position: 62.46
GC content: 72.47
Gene sequence:
>1188_bases GTGCTGATCTGGAAAACCGCGCTTTCGCTCACCTGGAAGGCGGGCCTCGTGTCGCCCGCGAGCGCGCCCGCCGCGGCCGC GCACGTCGACCGGGTCGTGCTCACCGGGGCAACAGGCTTCATCGGCGGCGCGGTGCTCGTGTCGCTCGTGAACGCCGGGC TGCTCGATCGCGTCGTCTGCATCGTGCGCGCGTGCGATCGCGCGCATGCGCTCGCGCGGCTGCGCGCGGCGGCGCTCAGG AGCGGGCTCGCGCCGTACTGGGCCGAGCGGCTGAGCGAGGCGAACGTGATCGCGGGCGAGCTTGGCGGCGCGCTCGCCGA CGCGGACGCGGCGCACATCGCGCTCGCGTCGCACGTGATTCACTGCGCGGGCGTGGCTTCGCTCGCCGACGCGCGCATCG TCAACGAGACGAACGTCGGCGCGACGCTGCGCTTTGCGCGCCGCTTCGCGGGCAGCCGGCGGCTGCAGCGTTTCGTGCAC GTCGGCGCGGCGTTCGCATGCGGGCTGCGGGCACGCGGCACGATTCGCGAGGACGATACGCTGGCGCGCGGGCGCGAGAT CGATTTCGCGCCGTACACGCGCGGCAAGCGCGATGCGGAAGCGCAATTGCGCGCGCTCGGCCTGCCGCTCGTCGTCGTGC GGCCGTCGTGCGTCGTCGGGCACACGCTGCTCGGCACGCAGCCGTCGGCGAGCACGTTCTGGATGTTTCGCATCGTTCAT GCGGCGCGCCGCTTCACCGCGCGGCCGATGGCGCGCATCGACGTGATCGCGGTGGACGATTGCGCGCGCGCGCTGATGCT GCTCGCGCTGAAGCCGTCGCTCGCGCACGATACGTACCACGTATCGGCGGGCGACGAAGCGCCCACCGTCACGCAGATCG TGCGCGCGATGGACGAGGCGGTGGGCCTCGACGACGAGCCCCGCTACGCGCTCTGCTCGCCGGCCGAGTTTCCTTCGATC GCGCGCGACGTGCTCGGCCGCCGCGACGCCCCGCGCGAGCGCGTGATCCGGCGCGCGTTGCAGTCTTACGCCGCGTTCGC CGAGCTCGATCACGTGTTCGACAACGCGCGCGTGCGCCGCGAGATCGACTTCGAGCCGCTGCCGTTCGTCGATTACGTGA ACGAGTGCATGCGCACGTCGCGCGGCATCGACGTGCTCGCGCAGATGCCGCGGACGGCAGCCCGCTAG
Upstream 100 bases:
>100_bases GCCGCTACGGGAACAGTCCGATCGTGCAGCGCAAGACCCAATATTTCGGGCTGTCTGCGCTGACCTATCGTTTCTGATTC TGAAGAAGGAGGTGGCCATC
Downstream 100 bases:
>100_bases CGCCCGTTCGCGCCGACGGCGCGCGCGCGGCGGGCGCCGCGCGTCACGAGCCGCCGACGTCGATCAGTTTGTCGAGCGCC GCGTACACCTCGCCGAGCGC
Product: NAD-dependent epimerase/dehydratase family protein
Products: NA
Alternate protein names: Male Sterility Domain; Male Sterility Domain Protein; Hemolysin F; Male Sterility Domain-Containing Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Hemolysin HlyF; L-Aminoadipate-Semialdehyde Dehydrogenase Large Subunit
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MLIWKTALSLTWKAGLVSPASAPAAAAHVDRVVLTGATGFIGGAVLVSLVNAGLLDRVVCIVRACDRAHALARLRAAALR SGLAPYWAERLSEANVIAGELGGALADADAAHIALASHVIHCAGVASLADARIVNETNVGATLRFARRFAGSRRLQRFVH VGAAFACGLRARGTIREDDTLARGREIDFAPYTRGKRDAEAQLRALGLPLVVVRPSCVVGHTLLGTQPSASTFWMFRIVH AARRFTARPMARIDVIAVDDCARALMLLALKPSLAHDTYHVSAGDEAPTVTQIVRAMDEAVGLDDEPRYALCSPAEFPSI ARDVLGRRDAPRERVIRRALQSYAAFAELDHVFDNARVRREIDFEPLPFVDYVNECMRTSRGIDVLAQMPRTAAR
Sequences:
>Translated_395_residues MLIWKTALSLTWKAGLVSPASAPAAAAHVDRVVLTGATGFIGGAVLVSLVNAGLLDRVVCIVRACDRAHALARLRAAALR SGLAPYWAERLSEANVIAGELGGALADADAAHIALASHVIHCAGVASLADARIVNETNVGATLRFARRFAGSRRLQRFVH VGAAFACGLRARGTIREDDTLARGREIDFAPYTRGKRDAEAQLRALGLPLVVVRPSCVVGHTLLGTQPSASTFWMFRIVH AARRFTARPMARIDVIAVDDCARALMLLALKPSLAHDTYHVSAGDEAPTVTQIVRAMDEAVGLDDEPRYALCSPAEFPSI ARDVLGRRDAPRERVIRRALQSYAAFAELDHVFDNARVRREIDFEPLPFVDYVNECMRTSRGIDVLAQMPRTAAR >Mature_395_residues MLIWKTALSLTWKAGLVSPASAPAAAAHVDRVVLTGATGFIGGAVLVSLVNAGLLDRVVCIVRACDRAHALARLRAAALR SGLAPYWAERLSEANVIAGELGGALADADAAHIALASHVIHCAGVASLADARIVNETNVGATLRFARRFAGSRRLQRFVH VGAAFACGLRARGTIREDDTLARGREIDFAPYTRGKRDAEAQLRALGLPLVVVRPSCVVGHTLLGTQPSASTFWMFRIVH AARRFTARPMARIDVIAVDDCARALMLLALKPSLAHDTYHVSAGDEAPTVTQIVRAMDEAVGLDDEPRYALCSPAEFPSI ARDVLGRRDAPRERVIRRALQSYAAFAELDHVFDNARVRREIDFEPLPFVDYVNECMRTSRGIDVLAQMPRTAAR
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42679; Mature: 42679
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIWKTALSLTWKAGLVSPASAPAAAAHVDRVVLTGATGFIGGAVLVSLVNAGLLDRVVC CEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHH IVRACDRAHALARLRAAALRSGLAPYWAERLSEANVIAGELGGALADADAAHIALASHVI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCHHHCCCHHHHHHHHHHH HCAGVASLADARIVNETNVGATLRFARRFAGSRRLQRFVHVGAAFACGLRARGTIREDDT HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LARGREIDFAPYTRGKRDAEAQLRALGLPLVVVRPSCVVGHTLLGTQPSASTFWMFRIVH HHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHH AARRFTARPMARIDVIAVDDCARALMLLALKPSLAHDTYHVSAGDEAPTVTQIVRAMDEA HHHHHHCCCCHHEEEEEHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHH VGLDDEPRYALCSPAEFPSIARDVLGRRDAPRERVIRRALQSYAAFAELDHVFDNARVRR CCCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH EIDFEPLPFVDYVNECMRTSRGIDVLAQMPRTAAR CCCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHCCC >Mature Secondary Structure MLIWKTALSLTWKAGLVSPASAPAAAAHVDRVVLTGATGFIGGAVLVSLVNAGLLDRVVC CEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHH IVRACDRAHALARLRAAALRSGLAPYWAERLSEANVIAGELGGALADADAAHIALASHVI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCHHHCCCHHHHHHHHHHH HCAGVASLADARIVNETNVGATLRFARRFAGSRRLQRFVHVGAAFACGLRARGTIREDDT HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LARGREIDFAPYTRGKRDAEAQLRALGLPLVVVRPSCVVGHTLLGTQPSASTFWMFRIVH HHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHH AARRFTARPMARIDVIAVDDCARALMLLALKPSLAHDTYHVSAGDEAPTVTQIVRAMDEA HHHHHHCCCCHHEEEEEHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHH VGLDDEPRYALCSPAEFPSIARDVLGRRDAPRERVIRRALQSYAAFAELDHVFDNARVRR CCCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH EIDFEPLPFVDYVNECMRTSRGIDVLAQMPRTAAR CCCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA