| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is fliY [C]
Identifier: 126446664
GI number: 126446664
Start: 515726
End: 516661
Strand: Direct
Name: fliY [C]
Synonym: BMA10247_A0566
Alternate gene names: 126446664
Gene position: 515726-516661 (Clockwise)
Preceding gene: 126446129
Following gene: 126446879
Centisome position: 21.92
GC content: 73.82
Gene sequence:
>936_bases ATGACCGACCGACGCACATTCGTCGGCGGCGCGGCGGCCTTCGCGGCCGCATGGGCCGCCGCGCCGTTCGGCGCGCGCGC CGGCATCGCGGTCGATCTCGACCCGCGTCAGGCGGGCCGCGTGCGCGCCGAACGCGATCCGGCCGCCGTCGACGCCGCGC GCCGCTACCGCTGGGTCGACGATCGCGCGTTCACCGTCGCGATCGCGCCGCATGCGCCACCCGTCGCGACGTTCGCGACC GACGCGCGCACCGTCGTCGGCGCGGACCCGGACTACGCGCAACTCGTCGCCGACGCGCTCGGCCGGCGGCTCGCGCTCGT GCCCGTCGCCTGGGCCGACTGGCCGCTCGGGCTGAGCGCCGGCAAGTACGACGCGGTGATCTCGAACGTCGGCGTCACCG AGCAGCGCAAGCGGAAGTTCGATTTCACGACGTACCGGCTCGGCCTGCACGGCTTCTATGTGCGGGCCGCGAGCCCGATC GCGCGGATCGCCGCGCCGCGCGACGTGGCGGGCCTGCGGATCATCACCGCGTCGGGAACGAGCCAGGAGCGCATCCTGCT CGAATGGGACCGGCGCAACGTCGCGCAGCGGCTCAAGCCGGTGGACGTGCTGTACTTCGACGACGACGCCGCATCGCGCG TCGCGCTGCTCTCGGGGCGCGCCGACGCGGAGCTGAATCCGAACGCGACACTCGCGTACCAGGCGGCGCGCGACGGCAGG ATTCGTTGCGTCGGCAACGTGAACGCGGGCTGGCCGCTCAAGGCCGACGTCGCGATCGCGACGCGCAAGGGCAGCGGCCT CGCCGACGCGCTCACGCTCGCGACCAACGGCCTGATCCGCAACGGCAAGTACCGGCAGGCGCTCGCGCGATGGGGGCTGC TGTCGGAGGCGCTCGACCGGTCGGAGACGAATCCGGCGGGGCTGCCGTCGTTCTGA
Upstream 100 bases:
>100_bases TATCAGAGGTATCAGAGGTATCAGAGGTATCAGAGGTATCAGAGGTATCAGAGGCGTCAGAGGCGTCAGAGGCATTAGAA GCATCGGAGGCACCGAAGCG
Downstream 100 bases:
>100_bases GCGCCGACGGCGCGACGCCGCACGCCCCGGCGTCGCTCGTTCGATGTCCTTCCCGCTTGCGCCGCACACAAATCTGCACT GGCCGCGATGCCGCCGTCTG
Product: putative amino acid ABC transporter, periplasmic amino acid-binding protein
Products: NA
Alternate protein names: Amino Acid ABC Transporter; ABC Amino Acid Transporter Permease Component; Luciferase Family Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Secreted Protein
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTDRRTFVGGAAAFAAAWAAAPFGARAGIAVDLDPRQAGRVRAERDPAAVDAARRYRWVDDRAFTVAIAPHAPPVATFAT DARTVVGADPDYAQLVADALGRRLALVPVAWADWPLGLSAGKYDAVISNVGVTEQRKRKFDFTTYRLGLHGFYVRAASPI ARIAAPRDVAGLRIITASGTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAARDGR IRCVGNVNAGWPLKADVAIATRKGSGLADALTLATNGLIRNGKYRQALARWGLLSEALDRSETNPAGLPSF
Sequences:
>Translated_311_residues MTDRRTFVGGAAAFAAAWAAAPFGARAGIAVDLDPRQAGRVRAERDPAAVDAARRYRWVDDRAFTVAIAPHAPPVATFAT DARTVVGADPDYAQLVADALGRRLALVPVAWADWPLGLSAGKYDAVISNVGVTEQRKRKFDFTTYRLGLHGFYVRAASPI ARIAAPRDVAGLRIITASGTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAARDGR IRCVGNVNAGWPLKADVAIATRKGSGLADALTLATNGLIRNGKYRQALARWGLLSEALDRSETNPAGLPSF >Mature_310_residues TDRRTFVGGAAAFAAAWAAAPFGARAGIAVDLDPRQAGRVRAERDPAAVDAARRYRWVDDRAFTVAIAPHAPPVATFATD ARTVVGADPDYAQLVADALGRRLALVPVAWADWPLGLSAGKYDAVISNVGVTEQRKRKFDFTTYRLGLHGFYVRAASPIA RIAAPRDVAGLRIITASGTSQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAARDGRI RCVGNVNAGWPLKADVAIATRKGSGLADALTLATNGLIRNGKYRQALARWGLLSEALDRSETNPAGLPSF
Specific function: Part Of A Binding-Protein-Dependent Transport System For Cystine. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788228, Length=162, Percent_Identity=30.8641975308642, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33374; Mature: 33243
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRRTFVGGAAAFAAAWAAAPFGARAGIAVDLDPRQAGRVRAERDPAAVDAARRYRWVD CCCCCEEECHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHEEEEC DRAFTVAIAPHAPPVATFATDARTVVGADPDYAQLVADALGRRLALVPVAWADWPLGLSA CCEEEEEECCCCCCCEEEECCCCEEEECCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCC GKYDAVISNVGVTEQRKRKFDFTTYRLGLHGFYVRAASPIARIAAPRDVAGLRIITASGT CCHHHHHHCCCCCHHHHHCCCCEEEEEECCEEEEECCCCHHHHCCCCCCCCEEEEEECCC SQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAARDGR CCCEEEEEECHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCE IRCVGNVNAGWPLKADVAIATRKGSGLADALTLATNGLIRNGKYRQALARWGLLSEALDR EEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHC SETNPAGLPSF CCCCCCCCCCC >Mature Secondary Structure TDRRTFVGGAAAFAAAWAAAPFGARAGIAVDLDPRQAGRVRAERDPAAVDAARRYRWVD CCCCEEECHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHEEEEC DRAFTVAIAPHAPPVATFATDARTVVGADPDYAQLVADALGRRLALVPVAWADWPLGLSA CCEEEEEECCCCCCCEEEECCCCEEEECCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCC GKYDAVISNVGVTEQRKRKFDFTTYRLGLHGFYVRAASPIARIAAPRDVAGLRIITASGT CCHHHHHHCCCCCHHHHHCCCCEEEEEECCEEEEECCCCHHHHCCCCCCCCEEEEEECCC SQERILLEWDRRNVAQRLKPVDVLYFDDDAASRVALLSGRADAELNPNATLAYQAARDGR CCCEEEEEECHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCE IRCVGNVNAGWPLKADVAIATRKGSGLADALTLATNGLIRNGKYRQALARWGLLSEALDR EEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHC SETNPAGLPSF CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA