| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446632
Identifier: 126446632
GI number: 126446632
Start: 32241
End: 32708
Strand: Reverse
Name: 126446632
Synonym: BMA10247_A0038
Alternate gene names: NA
Gene position: 32708-32241 (Counterclockwise)
Preceding gene: 126447288
Following gene: 126447426
Centisome position: 1.39
GC content: 67.09
Gene sequence:
>468_bases ATGTATCAGCGCATTCTTGTCGCAGTCGACGGCAGCGAAACGGCACGCCACGCATTCGACGCGGCGCTCGACATCGCCAG GACGAGCGGCGCGGAACTGCAGCCCTTCTACGTCGTGGAAAATGCCGCGATCTATTACAACGTGCCCGGCTACGATCCGT CGATCCTGCGCACGCAGCTCCTTCAGCAGGGCAACGAGCTCGCGAAGGAATTCGCGGAGAAAATGCAGGCGGCCGGCGTG AAGGGCGCGCTGAAGATCGGCGAGGCGACCTCGCTCGCCGACGTGCCGTCGCTCATCGTCGAGGGCGCGAAGGCGTTCGG CGCGGACCTGCTCGTGCTCGGCACGCACGGCCGGCGCGGTTTCAAGCGGCTCGTGCTCGGCAGCGTGGCCGAACAATGCG TGCGGCACTCGGCGCTGCCCGTGCTGCTGATCCCGGCCGCCGCGCACCCGGAAGATCGGGAAAGCTGA
Upstream 100 bases:
>100_bases CGCTGCACCTTCGTCAGTCGTCGTTTACTTTGTAAAAGGACGTCGTCAAACTCGATCGGCCGAACGGCCGATCTTTTCTC AACCGCACCACGGAGACATC
Downstream 100 bases:
>100_bases TCGAGCGCAATGGCTGCGATGTTTCGCCGCAACCGCGCGTTGCGGCCGAACAAGGAAATCGCACGGGGAGTCGCGGCGTT TTGTCGCTAAACAGGCTTAG
Product: universal stress protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MYQRILVAVDGSETARHAFDAALDIARTSGAELQPFYVVENAAIYYNVPGYDPSILRTQLLQQGNELAKEFAEKMQAAGV KGALKIGEATSLADVPSLIVEGAKAFGADLLVLGTHGRRGFKRLVLGSVAEQCVRHSALPVLLIPAAAHPEDRES
Sequences:
>Translated_155_residues MYQRILVAVDGSETARHAFDAALDIARTSGAELQPFYVVENAAIYYNVPGYDPSILRTQLLQQGNELAKEFAEKMQAAGV KGALKIGEATSLADVPSLIVEGAKAFGADLLVLGTHGRRGFKRLVLGSVAEQCVRHSALPVLLIPAAAHPEDRES >Mature_155_residues MYQRILVAVDGSETARHAFDAALDIARTSGAELQPFYVVENAAIYYNVPGYDPSILRTQLLQQGNELAKEFAEKMQAAGV KGALKIGEATSLADVPSLIVEGAKAFGADLLVLGTHGRRGFKRLVLGSVAEQCVRHSALPVLLIPAAAHPEDRES
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16571; Mature: 16571
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQRILVAVDGSETARHAFDAALDIARTSGAELQPFYVVENAAIYYNVPGYDPSILRTQL CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHH LQQGNELAKEFAEKMQAAGVKGALKIGEATSLADVPSLIVEGAKAFGADLLVLGTHGRRG HHCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH FKRLVLGSVAEQCVRHSALPVLLIPAAAHPEDRES HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MYQRILVAVDGSETARHAFDAALDIARTSGAELQPFYVVENAAIYYNVPGYDPSILRTQL CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHH LQQGNELAKEFAEKMQAAGVKGALKIGEATSLADVPSLIVEGAKAFGADLLVLGTHGRRG HHCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH FKRLVLGSVAEQCVRHSALPVLLIPAAAHPEDRES HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]