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The map label for this gene is yfmJ [H]

Identifier: 126446587

GI number: 126446587

Start: 245817

End: 247256

Strand: Direct

Name: yfmJ [H]

Synonym: BMA10247_A0284

Alternate gene names: 126446587

Gene position: 245817-247256 (Clockwise)

Preceding gene: 126446626

Following gene: 126446518

Centisome position: 10.45

GC content: 71.39

Gene sequence:

>1440_bases
GTGCGCGGTCTGACGTCGCGCGTGCGTCGGCGGCGGCATTTTCGCGCGCCGCCGGCGAAACTTGAAAAATCGCGGCGGTG
TGATTGCATCGTTGCGGATCGCGGATCGCGGATCGCGGATCGCGGATCGCGGATCGCGGATCGCGGATCGCGGATCGCGG
ATCGCGGATCGCGGATCGCGGATCGCGCCTCGTGCCTCGCGCCTCGCGCCTCGCGCCTCGTGCCTCGCGCCTCGCGCCTC
GCGCCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCGCCTCGCG
CCTCGCGCCTCGCGCCTCGCGCGAATGCGACCGCGGCGCACTCGCGGCGTTCGCCGATGCGGGCGCATGCCGTCCGTTTC
CATTTCTCCCGAAGGTGATGCCCATGTCCACACCCGTCAATCGACAACTGCGCCTGAAGGCGCGCCCCGACGGACGCGTC
GGTCACGAGCACTTCACGCTCGCCGAAGCGCCGCTGCCCCCGCTCGGGCCGGGCGAGATGCTCGTGCGCGTGCTGTATCT
GTCGATGGATCCCACCAATCGCGTCTGGATGAGCGACATCCCGCAATATCTGCCGCCGGTGGCGATCGGCGACGTGATGC
GCGCGCTCGGGATCGGCCGCGTCGTCGCGTCGAACGCGCCGGGGTTCGCCGAGGGCGATCTCGTGCAGGGGCTCGTCGGC
TGGCAGGACTACGCGCACGTGCGCGCCGACGAAATCGCGCAGTACACGAAGCTGCCCGCCGCGCTCGGCCTGCCGCTGCC
GCGCCTGCTCGGCGCATGCGGGATGAGCGGGCTCACCGCGTACTACGGGCTCACCGAGATCGCGCCGGTGCAGCCGGGCG
AGACGCTCGTCGTGTCGGCGGCCGCGGGCTCGGTGGGCTCCGTCGCCGGGCAGATCGGCAAGATTCACGGCGCGCGCGTT
GTCGGCATCGCGGGCGGCGCGGACAAGTGCCGCTACCTGACCGACGAACTCGGCTTCGACGCGGCCGTCGACTACAAGTC
CGACGACTGGAAGCGCGCGCTGAAGGACGCGACGCCCGACGGCGTGCACGTGAGCTTCGAGAACGTCGGCGGCGAGATCA
TGCGCGCGGTGCTGTCGCGGATGGCGATCGGCGGACGCGTCGCGCTGTGCGGCGTGATCGCGAACTACAACAACGGGCGG
CCCGCCGATGACGTCAGCGTGTTGATCGCGAAGCGGCTGACGATGCGCGGCTTCCTGATTCTCGATTACCGGAAGAGCCG
CGAGGCGATCGCGACGCTCGCCGGCTGGCTGCGCGACGGCCGGCTGAAGGCGGAGGAAACCGTCGCCGACGGGCTGACCA
ACGCGCCCGACGTGCTGAATCGCCTGTTTGACGGCAGCCATCGCGGCAAGCTCGTGCTGCGGGTCGATCCGCAAGCTTGA

Upstream 100 bases:

>100_bases
GGCTCGGCGAGCCCGACGACGTCGCGCATGCGGCCGTCTATCTCGCGTCCGACGAGAGCCGCTACGTGACGGGCGCGGAG
CTCGTGATCGACGGCGGGAT

Downstream 100 bases:

>100_bases
TCGGGCGGCGGCGCGCGCTTTGGCCGATGCTGCCGCTTCGGCTGCTTCGACCGCTTCGACCGCTTCGACTGCTTCGACTG
CTTCGACTGCCTCGGCCGCT

Product: oxidoreductase, zinc-binding dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MRGLTSRVRRRRHFRAPPAKLEKSRRCDCIVADRGSRIADRGSRIADRGSRIADRGSRIADRASCLAPRASRLVPRASRL
APRASRLAPRASRLAPRASRLAPRASRLAPRASRECDRGALAAFADAGACRPFPFLPKVMPMSTPVNRQLRLKARPDGRV
GHEHFTLAEAPLPPLGPGEMLVRVLYLSMDPTNRVWMSDIPQYLPPVAIGDVMRALGIGRVVASNAPGFAEGDLVQGLVG
WQDYAHVRADEIAQYTKLPAALGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAAGSVGSVAGQIGKIHGARV
VGIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPDGVHVSFENVGGEIMRAVLSRMAIGGRVALCGVIANYNNGR
PADDVSVLIAKRLTMRGFLILDYRKSREAIATLAGWLRDGRLKAEETVADGLTNAPDVLNRLFDGSHRGKLVLRVDPQA

Sequences:

>Translated_479_residues
MRGLTSRVRRRRHFRAPPAKLEKSRRCDCIVADRGSRIADRGSRIADRGSRIADRGSRIADRASCLAPRASRLVPRASRL
APRASRLAPRASRLAPRASRLAPRASRLAPRASRECDRGALAAFADAGACRPFPFLPKVMPMSTPVNRQLRLKARPDGRV
GHEHFTLAEAPLPPLGPGEMLVRVLYLSMDPTNRVWMSDIPQYLPPVAIGDVMRALGIGRVVASNAPGFAEGDLVQGLVG
WQDYAHVRADEIAQYTKLPAALGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAAGSVGSVAGQIGKIHGARV
VGIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPDGVHVSFENVGGEIMRAVLSRMAIGGRVALCGVIANYNNGR
PADDVSVLIAKRLTMRGFLILDYRKSREAIATLAGWLRDGRLKAEETVADGLTNAPDVLNRLFDGSHRGKLVLRVDPQA
>Mature_479_residues
MRGLTSRVRRRRHFRAPPAKLEKSRRCDCIVADRGSRIADRGSRIADRGSRIADRGSRIADRASCLAPRASRLVPRASRL
APRASRLAPRASRLAPRASRLAPRASRLAPRASRECDRGALAAFADAGACRPFPFLPKVMPMSTPVNRQLRLKARPDGRV
GHEHFTLAEAPLPPLGPGEMLVRVLYLSMDPTNRVWMSDIPQYLPPVAIGDVMRALGIGRVVASNAPGFAEGDLVQGLVG
WQDYAHVRADEIAQYTKLPAALGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSAAAGSVGSVAGQIGKIHGARV
VGIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPDGVHVSFENVGGEIMRAVLSRMAIGGRVALCGVIANYNNGR
PADDVSVLIAKRLTMRGFLILDYRKSREAIATLAGWLRDGRLKAEETVADGLTNAPDVLNRLFDGSHRGKLVLRVDPQA

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=348, Percent_Identity=35.9195402298851, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI226246680, Length=348, Percent_Identity=35.9195402298851, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI22748929, Length=348, Percent_Identity=35.9195402298851, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI226059159, Length=335, Percent_Identity=34.3283582089552, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI226059133, Length=335, Percent_Identity=34.3283582089552, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI226056130, Length=307, Percent_Identity=35.5048859934853, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI28557745, Length=334, Percent_Identity=27.8443113772455, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI22538446, Length=277, Percent_Identity=28.5198555956679, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI22538444, Length=277, Percent_Identity=28.5198555956679, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI226510941, Length=338, Percent_Identity=40.8284023668639, Blast_Score=247, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI133901710, Length=314, Percent_Identity=35.6687898089172, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI133901712, Length=314, Percent_Identity=35.6687898089172, Blast_Score=171, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6323504, Length=337, Percent_Identity=29.3768545994065, Blast_Score=129, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 51526; Mature: 51526

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLTSRVRRRRHFRAPPAKLEKSRRCDCIVADRGSRIADRGSRIADRGSRIADRGSRIA
CCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCHHHHHCHHHHHHCHHHHHHHHHHH
DRASCLAPRASRLVPRASRLAPRASRLAPRASRLAPRASRLAPRASRLAPRASRECDRGA
HHHHHHCCHHHHHCCHHHHHCCHHHHHCCHHHHHCCHHHHHCCHHHHCCCHHHHHCCCCH
LAAFADAGACRPFPFLPKVMPMSTPVNRQLRLKARPDGRVGHEHFTLAEAPLPPLGPGEM
HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCHHHH
LVRVLYLSMDPTNRVWMSDIPQYLPPVAIGDVMRALGIGRVVASNAPGFAEGDLVQGLVG
HHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHH
WQDYAHVRADEIAQYTKLPAALGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSA
HHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCHHHHHHCCHHCCCCCCCCEEEEEE
AAGSVGSVAGQIGKIHGARVVGIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPD
CCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCC
GVHVSFENVGGEIMRAVLSRMAIGGRVALCGVIANYNNGRPADDVSVLIAKRLTMRGFLI
CEEEEHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEE
LDYRKSREAIATLAGWLRDGRLKAEETVADGLTNAPDVLNRLFDGSHRGKLVLRVDPQA
EECHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MRGLTSRVRRRRHFRAPPAKLEKSRRCDCIVADRGSRIADRGSRIADRGSRIADRGSRIA
CCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCHHHHHCHHHHHHCHHHHHHHHHHH
DRASCLAPRASRLVPRASRLAPRASRLAPRASRLAPRASRLAPRASRLAPRASRECDRGA
HHHHHHCCHHHHHCCHHHHHCCHHHHHCCHHHHHCCHHHHHCCHHHHCCCHHHHHCCCCH
LAAFADAGACRPFPFLPKVMPMSTPVNRQLRLKARPDGRVGHEHFTLAEAPLPPLGPGEM
HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCHHHH
LVRVLYLSMDPTNRVWMSDIPQYLPPVAIGDVMRALGIGRVVASNAPGFAEGDLVQGLVG
HHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHH
WQDYAHVRADEIAQYTKLPAALGLPLPRLLGACGMSGLTAYYGLTEIAPVQPGETLVVSA
HHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCHHHHHHCCHHCCCCCCCCEEEEEE
AAGSVGSVAGQIGKIHGARVVGIAGGADKCRYLTDELGFDAAVDYKSDDWKRALKDATPD
CCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCC
GVHVSFENVGGEIMRAVLSRMAIGGRVALCGVIANYNNGRPADDVSVLIAKRLTMRGFLI
CEEEEHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEE
LDYRKSREAIATLAGWLRDGRLKAEETVADGLTNAPDVLNRLFDGSHRGKLVLRVDPQA
EECHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]