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The map label for this gene is 126446530

Identifier: 126446530

GI number: 126446530

Start: 2282998

End: 2284290

Strand: Reverse

Name: 126446530

Synonym: BMA10247_A2350

Alternate gene names: NA

Gene position: 2284290-2282998 (Counterclockwise)

Preceding gene: 126445990

Following gene: 126447386

Centisome position: 97.09

GC content: 65.2

Gene sequence:

>1293_bases
ATGCCGGCCGCGCGGGCGCGTAATCATATCCATCGCAGAATTAATTGGTTTTCGGTTCGTTTTCCTGTCCGTATCGTTCA
GCGATTCGAACGACAAATCGACCACGAGGAAAACCACCACATGAAGCAAACGAAGCATCTCGCCGCGCTCGCCGTGCCGG
CCGGCTTTCTGCTGTCCGCGGGCGTGCACGCGCAAAGCAGCGTCACGCTGTACGGGATCGTCGATGCGGGCATCGCCTAC
GTGCACAACGTCCAGGGCGCCGACGGCCGCAATGAGGCCTCGCTCTTCAAGTTCAGCAGCGGCAACCTGTCCGGCAGCCG
CTGGGGCCTGCGCGGCACCGAGGATCTGGGCGGCGGCCTCGCCGCGCTGTTCCAGCTCGAAAACGGCTTCAATCTCGGCA
CGGGGCAGCAGAACGGCAATCGCGAATTCGGCCGCAAGGCGATCGTCGGCCTCGCGAGCAACACGTGGGGCAGCGTCACG
CTCGGCCGCCAGTACGATCCGGTCGTCGATCTCGTACAGGGGCTCACCGAGGACAACTACTTCGGCGGCGTGTTCGCGAC
ACCGGGCGATCTCGACAACTACGACAACAGCCTGCGCGTGAGCAACTCGGTGAAATACACGAGCCCGGTGCTGTCGGGCT
TCCAGTTCGAAGCGCTGTACGGCTTCGGCGGCGTCGCGGGCGCGACGGGCAGCGGCCGCACGTACAGCTTCGCCGCAAGC
TACGCGAACGGGCCGCTGTCGCTCGGCGCGGGCTACCTGTACGCGGACGGCGGCGCGAACGCGACGAACGGCGTGCGCAC
GTGGACGGGCAGCTCGGACACGCTGTTCAACACCGTGATCAACCAGGGCTTCGCAAGCGCGAAGTCGATTCAGATCGTGC
GCGCCGGCGGCCAGTACGTGCTCGGCTCGGCGACGTTCGGCCTCGCGTATTCGAACACGCAGTACCGCCGCGATTCGCTG
TCGGCATTCAGCGATACCGCGAAGTTCAACAGCGGCTCCGCGTTCTTCAACTATCAGTTCTCGCCGGCGCTGCGCGCGGG
CGTGGGCTACAACTACACGTCGCTGACGGGGCCGGCTTCCGCGCACTATCATCAGGTGAACCTCGGCGCGGGCTATGCAC
TGTCCAAGCGCACCGATCTGTACGCGCTGTTCGGCTATCAGAAGGCGAGCGGCCATACGCTCGGCGCGAACGGCGCGGTG
ATCGACGCGCAGGCGTCCGTCGGCTCGTATGGCGCGAACTCGGGCACCGATTCGCAGGAACTCGCGATCGTCGGAATTCG
GCACAAGTTCTGA

Upstream 100 bases:

>100_bases
TGCTCGGCATGGACGGCGTTCGCATCGCCGTCCGCGCTTCGTCTTCTTCACGATGGCCCGCCGCCTGTGAGGCGCACGCG
AGCAACCGCAGCCGCCGCGC

Downstream 100 bases:

>100_bases
TTCGCGAGCGCGACGGGCGCGAGTCTCGTTGCGCGGCGGGCAGGGTGGCGGACCGCACGGCGGATCGAGCGGCCCGCCGC
GACGTTCGTCGGCGATATCG

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MPAARARNHIHRRINWFSVRFPVRIVQRFERQIDHEENHHMKQTKHLAALAVPAGFLLSAGVHAQSSVTLYGIVDAGIAY
VHNVQGADGRNEASLFKFSSGNLSGSRWGLRGTEDLGGGLAALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVT
LGRQYDPVVDLVQGLTEDNYFGGVFATPGDLDNYDNSLRVSNSVKYTSPVLSGFQFEALYGFGGVAGATGSGRTYSFAAS
YANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVINQGFASAKSIQIVRAGGQYVLGSATFGLAYSNTQYRRDSL
SAFSDTAKFNSGSAFFNYQFSPALRAGVGYNYTSLTGPASAHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAV
IDAQASVGSYGANSGTDSQELAIVGIRHKF

Sequences:

>Translated_430_residues
MPAARARNHIHRRINWFSVRFPVRIVQRFERQIDHEENHHMKQTKHLAALAVPAGFLLSAGVHAQSSVTLYGIVDAGIAY
VHNVQGADGRNEASLFKFSSGNLSGSRWGLRGTEDLGGGLAALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVT
LGRQYDPVVDLVQGLTEDNYFGGVFATPGDLDNYDNSLRVSNSVKYTSPVLSGFQFEALYGFGGVAGATGSGRTYSFAAS
YANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVINQGFASAKSIQIVRAGGQYVLGSATFGLAYSNTQYRRDSL
SAFSDTAKFNSGSAFFNYQFSPALRAGVGYNYTSLTGPASAHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAV
IDAQASVGSYGANSGTDSQELAIVGIRHKF
>Mature_429_residues
PAARARNHIHRRINWFSVRFPVRIVQRFERQIDHEENHHMKQTKHLAALAVPAGFLLSAGVHAQSSVTLYGIVDAGIAYV
HNVQGADGRNEASLFKFSSGNLSGSRWGLRGTEDLGGGLAALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVTL
GRQYDPVVDLVQGLTEDNYFGGVFATPGDLDNYDNSLRVSNSVKYTSPVLSGFQFEALYGFGGVAGATGSGRTYSFAASY
ANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVINQGFASAKSIQIVRAGGQYVLGSATFGLAYSNTQYRRDSLS
AFSDTAKFNSGSAFFNYQFSPALRAGVGYNYTSLTGPASAHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAVI
DAQASVGSYGANSGTDSQELAIVGIRHKF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 45673; Mature: 45542

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAARARNHIHRRINWFSVRFPVRIVQRFERQIDHEENHHMKQTKHLAALAVPAGFLLSA
CCCHHHHHHHHHHEEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHC
GVHAQSSVTLYGIVDAGIAYVHNVQGADGRNEASLFKFSSGNLSGSRWGLRGTEDLGGGL
CCCCCCCEEEEEEHHCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCE
AALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVTLGRQYDPVVDLVQGLTEDNY
EEEEEECCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCEEECCCCCHHHHHHHCCCCCCC
FGGVFATPGDLDNYDNSLRVSNSVKYTSPVLSGFQFEALYGFGGVAGATGSGRTYSFAAS
CCCEEECCCCCCCCCCCEEECCCCEECHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEEE
YANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVINQGFASAKSIQIVRAGGQYV
CCCCCHHHCCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCEE
LGSATFGLAYSNTQYRRDSLSAFSDTAKFNSGSAFFNYQFSPALRAGVGYNYTSLTGPAS
EEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCC
AHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAVIDAQASVGSYGANSGTDSQE
CCEEEEECCCCEEECCCCCEEEEEEEECCCCCEECCCCCEEECCCCCCCCCCCCCCCCCE
LAIVGIRHKF
EEEEEEECCC
>Mature Secondary Structure 
PAARARNHIHRRINWFSVRFPVRIVQRFERQIDHEENHHMKQTKHLAALAVPAGFLLSA
CCHHHHHHHHHHEEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHC
GVHAQSSVTLYGIVDAGIAYVHNVQGADGRNEASLFKFSSGNLSGSRWGLRGTEDLGGGL
CCCCCCCEEEEEEHHCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCE
AALFQLENGFNLGTGQQNGNREFGRKAIVGLASNTWGSVTLGRQYDPVVDLVQGLTEDNY
EEEEEECCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCEEECCCCCHHHHHHHCCCCCCC
FGGVFATPGDLDNYDNSLRVSNSVKYTSPVLSGFQFEALYGFGGVAGATGSGRTYSFAAS
CCCEEECCCCCCCCCCCEEECCCCEECHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEEE
YANGPLSLGAGYLYADGGANATNGVRTWTGSSDTLFNTVINQGFASAKSIQIVRAGGQYV
CCCCCHHHCCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCEE
LGSATFGLAYSNTQYRRDSLSAFSDTAKFNSGSAFFNYQFSPALRAGVGYNYTSLTGPAS
EEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCC
AHYHQVNLGAGYALSKRTDLYALFGYQKASGHTLGANGAVIDAQASVGSYGANSGTDSQE
CCEEEEECCCCEEECCCCCEEEEEEEECCCCCEECCCCCEEECCCCCCCCCCCCCCCCCE
LAIVGIRHKF
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]