| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446514
Identifier: 126446514
GI number: 126446514
Start: 219498
End: 220232
Strand: Direct
Name: 126446514
Synonym: BMA10247_A0257
Alternate gene names: NA
Gene position: 219498-220232 (Clockwise)
Preceding gene: 126447780
Following gene: 126447289
Centisome position: 9.33
GC content: 71.7
Gene sequence:
>735_bases ATGGAACGCGACGTCGTTGAGCGGCCGCGGATCGCATTCGACATCGACGCCTGCTGGAATCGCATCGGCACGCGCGGCGA CCGCTCATGCGAGCGGCTCGACACCTATCGACGCTGCCTGAACTGCCCGGTGTTCGAGCGGCACGCGGCGCTGCTGCTCG ATCGCCCGCTGACCGACGCGGATCTCGCCGACGCGGCGCGCGTTGCCGCCGAGCGCGCGCCGGGCGCGAACGCGCCGGCA TCGAAGGCGTCGGCAGCGGCGCGCGACGGCGATGCCGACGCCGTGCATTCGGCGCTCGCGTTTCGCGTCGCCGACGAGTG GCTCGCGCTGCCGATTCGCGTGCTGCGCGAGATCACCGATACGCGCGCGATTCATCCGCTGCCGCACCGGCGCAACCGCG CGGTGCTCGGCATCGTCAACGTGCGCGGGATGCTGCGCGTCGCGGTATCGCTCGCCGAGCTGCTGAGCCTCGATGCGCGC GCGGATCGCGCCGCGCCGCGCATGAGCTTCACGCGGATGCTCGTCGTCGCGCATCGCGGCGATCCGGTCGTGTTTCCGGT CGACGAAGTCGAAGGCGTGCTGCGCTTCGCGTCCGCCGACTGGATGCCGGTGCCGGCCACCGTCGCGCGCACGGGCGCCG TGCATTCGCGCGGCGTGTTCGCGTGGCGCGGCAAGTCGATCGGCCTGCTCGACGAAGATCGCCTGTTCGATTCGCTGACG CGGAGCCTGCGATGA
Upstream 100 bases:
>100_bases GACGGCGCACAATGGCTGATGCAACGGGCCCGACGCGCGGCCCAGTACGAATCGGCCGCGTCCGTGACCGACACGGACGA CGGCGAACCGAGAGGAACCC
Downstream 100 bases:
>100_bases GCACCGACGACGATTTCGGCCGCGCGTCGCTGCTCGAGCTGTTTCGCGAGGAGACGCACACGCAGACGCAGGCGCTGTCC GAGCGGCTGCTCGCGCTCGA
Product: chemotaxis protein cheW
Products: NA
Alternate protein names: Chemotaxis Signal Transduction Protein; CheW Domain-Containing Protein; Chemotaxis Protein; Signal Transducer CheW-Like Protein; CheW-Like Domain-Containing; Chemotaxis-Related Protein; Chemotaxis Protein CheW; Chemotaxis-Like Protein; CheW Domain-Containing Protein WspD
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDADLADAARVAAERAPGANAPA SKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITDTRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDAR ADRAAPRMSFTRMLVVAHRGDPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT RSLR
Sequences:
>Translated_244_residues MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDADLADAARVAAERAPGANAPA SKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITDTRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDAR ADRAAPRMSFTRMLVVAHRGDPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT RSLR >Mature_244_residues MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDADLADAARVAAERAPGANAPA SKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITDTRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDAR ADRAAPRMSFTRMLVVAHRGDPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT RSLR
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26929; Mature: 26929
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDA CCCCCHHCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC DLADAARVAAERAPGANAPASKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITD HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDARADRAAPRMSFTRMLVVAHRG HCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECC DPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT CCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHH RSLR HHCC >Mature Secondary Structure MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDA CCCCCHHCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC DLADAARVAAERAPGANAPASKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITD HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDARADRAAPRMSFTRMLVVAHRG HCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECC DPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT CCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHH RSLR HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA