| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is bsaM [H]
Identifier: 126446486
GI number: 126446486
Start: 680693
End: 681979
Strand: Reverse
Name: bsaM [H]
Synonym: BMA10247_A0736
Alternate gene names: 126446486
Gene position: 681979-680693 (Counterclockwise)
Preceding gene: 126447141
Following gene: 126445643
Centisome position: 28.99
GC content: 69.93
Gene sequence:
>1287_bases ATGAATAAACCAGATTCCGGACTTGAAGCTCTGCAACTCCGAATCCTGTTCGGTCCGCTATTCGGCTCGGATATCGCGAT TCCGTCAGGGGAAGTATTTTTCTGCGTCGGCGAGCAGGTGATCGACGATCGTCCGGCGGAGCATCCGGAAAATCGCGCCG GCCATTTACTGGAGCGCGCGGTCGATACGCTGTATATCCCGCACCGGGCCGGCGCGCCGAATTTCCGCCTGCGTTTTCCG GGCGCGCCGACGCAGGCGGCGCGAACCGCCGAAACCGGCGAAGCCGCGTCCGGCGATTTCGAAGTCGATTTTCTGTCGGC GGACGGTTGCGTCACGCAACGCGCGGCATTCAACACCGTCTGCCGCTTCGGCGATCTCGCGTTCGCGCTCAGGCGTCAGC GCGAGCCATGGAGCGAGGCGGTCATGCACTACGCGCCGCACGCGCCTTCGCGTGCGGCGGACGCCGCCGAGCCGGGCGCG CCCGGTGAGCCCGGCGATGGCGGCGAGCGCGCATCGCGCTTCGCGCTGAAGCTCGGCGCGCTGCTCGTCGCGGGGGTCGC GCTCGCGGCGCTCGCGTACTGGCAGGTGCAGCGCTATGTCGGCGCGCAGAAGCTCGCGAGCGTCAACGGCGTGCTGGCGG GCGCGCCCGTGCCCAACGCGATCCTGCCCGGCGACGACGGCCGGATCTACGTGCTGAGCGCGTCGCAGGACGGCGCCGAA TGGGACCGCGAGGCGCTGCTGAAGGCGGCGCTGCCGGAGAAGATCGAAGTCGCCGTGATCGGCGCGGAGCGGCAACGCGT CGAGCGCCGGCTCGACGAAGCCGGCGTCGATTTCGTGACCGTGCGCCTCGACGCGCCCGAGCACCCGGAGCTGATCCTCA CCGGCGCCGCGCCCGCCGCCGCGCGCGCACGCGCGATCGGCGAGCTGCGGCGCGCGGCCCCGTACGTCCGGGACGTGCGC GTGATCGACGCGAGCCTCGGCGCGATCGAGCAGGAGGCGCGCAACGCGCTCGACAAGGTGGGCGCGCGCTACCGGCTGCT CGCGCGGCGCGGCGGCGCGACGTTCGAGGTGGCGAGCTCGTTCGGCGACGAGGAGCTCGCCGCCTTGCAGAACCTCATGC GCTCGTTCGGCCACAAGTGGGGCACGCGCCGCGTCGATTTCAAGATCGCGCTGCGCACCGACTGGCTGAAGGGCAAATCG TATCGGGAAGGCGGCGACGGCTACGTGCTGCTCGATCACGCGTCCTGGTATTTCCCGCAACCCCTGGAAGGAGCACATTA CCGATGA
Upstream 100 bases:
>100_bases ATTATCCGGTTCACGATCGACGGCAGCGAAGGCGATCGGGAAAACGATATATACATAATCAGGCCATTTATCGCCCAGGT CACCCTGGAAAATTACCGAG
Downstream 100 bases:
>100_bases GCAATCCCCCGACCCCGCTGCTGACCGACTACGAGTGGTCAGGCTACCTGACCGGCATCGGCCGCGCGTTCGACGACGGC GTGAAGGATCTGAACAAGCA
Product: type III secretion system protein BsaM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MNKPDSGLEALQLRILFGPLFGSDIAIPSGEVFFCVGEQVIDDRPAEHPENRAGHLLERAVDTLYIPHRAGAPNFRLRFP GAPTQAARTAETGEAASGDFEVDFLSADGCVTQRAAFNTVCRFGDLAFALRRQREPWSEAVMHYAPHAPSRAADAAEPGA PGEPGDGGERASRFALKLGALLVAGVALAALAYWQVQRYVGAQKLASVNGVLAGAPVPNAILPGDDGRIYVLSASQDGAE WDREALLKAALPEKIEVAVIGAERQRVERRLDEAGVDFVTVRLDAPEHPELILTGAAPAAARARAIGELRRAAPYVRDVR VIDASLGAIEQEARNALDKVGARYRLLARRGGATFEVASSFGDEELAALQNLMRSFGHKWGTRRVDFKIALRTDWLKGKS YREGGDGYVLLDHASWYFPQPLEGAHYR
Sequences:
>Translated_428_residues MNKPDSGLEALQLRILFGPLFGSDIAIPSGEVFFCVGEQVIDDRPAEHPENRAGHLLERAVDTLYIPHRAGAPNFRLRFP GAPTQAARTAETGEAASGDFEVDFLSADGCVTQRAAFNTVCRFGDLAFALRRQREPWSEAVMHYAPHAPSRAADAAEPGA PGEPGDGGERASRFALKLGALLVAGVALAALAYWQVQRYVGAQKLASVNGVLAGAPVPNAILPGDDGRIYVLSASQDGAE WDREALLKAALPEKIEVAVIGAERQRVERRLDEAGVDFVTVRLDAPEHPELILTGAAPAAARARAIGELRRAAPYVRDVR VIDASLGAIEQEARNALDKVGARYRLLARRGGATFEVASSFGDEELAALQNLMRSFGHKWGTRRVDFKIALRTDWLKGKS YREGGDGYVLLDHASWYFPQPLEGAHYR >Mature_428_residues MNKPDSGLEALQLRILFGPLFGSDIAIPSGEVFFCVGEQVIDDRPAEHPENRAGHLLERAVDTLYIPHRAGAPNFRLRFP GAPTQAARTAETGEAASGDFEVDFLSADGCVTQRAAFNTVCRFGDLAFALRRQREPWSEAVMHYAPHAPSRAADAAEPGA PGEPGDGGERASRFALKLGALLVAGVALAALAYWQVQRYVGAQKLASVNGVLAGAPVPNAILPGDDGRIYVLSASQDGAE WDREALLKAALPEKIEVAVIGAERQRVERRLDEAGVDFVTVRLDAPEHPELILTGAAPAAARARAIGELRRAAPYVRDVR VIDASLGAIEQEARNALDKVGARYRLLARRGGATFEVASSFGDEELAALQNLMRSFGHKWGTRRVDFKIALRTDWLKGKS YREGGDGYVLLDHASWYFPQPLEGAHYR
Specific function: Required for invasion of epithelial cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013387 - InterPro: IPR019029 [H]
Pfam domain/function: PF09480 PrgH [H]
EC number: NA
Molecular weight: Translated: 46323; Mature: 46323
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPDSGLEALQLRILFGPLFGSDIAIPSGEVFFCVGEQVIDDRPAEHPENRAGHLLERA CCCCCCCHHHHEEHEEEECCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCHHHHHHHHH VDTLYIPHRAGAPNFRLRFPGAPTQAARTAETGEAASGDFEVDFLSADGCVTQRAAFNTV HHHEECCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH CRFGDLAFALRRQREPWSEAVMHYAPHAPSRAADAAEPGAPGEPGDGGERASRFALKLGA HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLVAGVALAALAYWQVQRYVGAQKLASVNGVLAGAPVPNAILPGDDGRIYVLSASQDGAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEECCCCCCH WDREALLKAALPEKIEVAVIGAERQRVERRLDEAGVDFVTVRLDAPEHPELILTGAAPAA HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCHH ARARAIGELRRAAPYVRDVRVIDASLGAIEQEARNALDKVGARYRLLARRGGATFEVASS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEHHH FGDEELAALQNLMRSFGHKWGTRRVDFKIALRTDWLKGKSYREGGDGYVLLDHASWYFPQ CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC PLEGAHYR CCCCCCCC >Mature Secondary Structure MNKPDSGLEALQLRILFGPLFGSDIAIPSGEVFFCVGEQVIDDRPAEHPENRAGHLLERA CCCCCCCHHHHEEHEEEECCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCHHHHHHHHH VDTLYIPHRAGAPNFRLRFPGAPTQAARTAETGEAASGDFEVDFLSADGCVTQRAAFNTV HHHEECCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH CRFGDLAFALRRQREPWSEAVMHYAPHAPSRAADAAEPGAPGEPGDGGERASRFALKLGA HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLVAGVALAALAYWQVQRYVGAQKLASVNGVLAGAPVPNAILPGDDGRIYVLSASQDGAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEECCCCCCH WDREALLKAALPEKIEVAVIGAERQRVERRLDEAGVDFVTVRLDAPEHPELILTGAAPAA HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCHH ARARAIGELRRAAPYVRDVRVIDASLGAIEQEARNALDKVGARYRLLARRGGATFEVASS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEHHH FGDEELAALQNLMRSFGHKWGTRRVDFKIALRTDWLKGKSYREGGDGYVLLDHASWYFPQ CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC PLEGAHYR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476203; 11677609 [H]