| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is mchE [H]
Identifier: 126446477
GI number: 126446477
Start: 1290136
End: 1291431
Strand: Reverse
Name: mchE [H]
Synonym: BMA10247_A1320
Alternate gene names: 126446477
Gene position: 1291431-1290136 (Counterclockwise)
Preceding gene: 126447784
Following gene: 126447125
Centisome position: 54.89
GC content: 63.58
Gene sequence:
>1296_bases ATGCCTATCCGGATGAACGCTCTGAGAGAGCAGAAGACGCCGCGCAAGCTCACGCGCGGCACGACGTTCGGCACCGTGAT CAACGGCGTGGTCGACGTGCCGATTTCGATGCGCTTTTTCTGCTATCTGTCGATCATGATGTTCGCGATGTTCATCGTCG CGCTCGTGCGCCTCACCTACGCGAACACCGAGAGCGTGATGGGGATGCTCACGCCGCGCTCGGGGCTGATCGGCGTCGGC GCGCCGCCCGGATGGGCGGTGCGCGAGGTGTTCGTCGCGAAGGACCAGCACGTGAAGGCCGGCCAGAAGCTCTTGAGCGT CACGCGCGACACGAGCTTCGTGTCGCAGGCGAACAACGTGCAGGGCATGCGCGAATCGATCAAGCGGCAGCGCGTGGAGG TCGGTCAGCAGATCGACGCGGCGAAGCTCGAATATCAATCGACGATCCAGCAGATCAACCAGCAGATCGCCGCGTTCGAC GAGAGCCGCGGGCTGATCGACAAGCAGATCCAGGACCAGAAGCGGATCGTCTCCGAATACCAGGAGCGGCGCGACCGCGT GAAGCAACTGCTCAACGAGCAGGTGGTCACGCTCGAGCAGTACAACCAGGTCAACACGCAATACCTGCAGGCGAGCCAGG CGTACCAGGACCTGATGCTGCGCCGCGCCGACCTCGCGAAGAACGCGATGAAGCTGCGCGGCGATCTCGAAACCGTGCAG AGCAAGTACGACGGCTCGAACGCCGAGCTAAAGATCAAGCAGGAAGAGCTGAACTCGAAGGAATACAACATCGACGAGAG CGTGAACCAGGTGCTGTACGCGCCCGCCGACGGCCAGATCGTGCGGCTCGACGTCGTGCAGGGCAGCGTGATCGATCCGC CCGGCACGCGCGTGGTCGAGATCCTGCCGGCGAAGGCGGACGGGCTCATCGCCGAGCTGTACATTCCGTCGTCGAAGGCC GGCTTCGTGAAGCCGGGCCAGGAAGTGAAGCTCGCGTACGGCAGCTATCCGGTCGAGAAGTTCGGCACCTATCGCGGCAA GCTGCTGTCGGTGTCGCCCGTCGCGTTCACCGCGAAGGAGCTGAATCTGCCCGCCGACAACGGCGCGCCGCAGACTTACT TCAAGAGCTGGGTCGAGCTTGTCGACCGCAAGCCGGCGTTCGAAGGCAAGGCGCTCTCGCTGAAGGCCGGCATGACGCTC AGGGCGGACATCGTGCTCGAGAAGCGCACGCTGCTCGAATGGCTGTTCGAACCGTTGTATCGGATCCGGCAGCGGATATT CGGTACGCCCGCGTGA
Upstream 100 bases:
>100_bases CTGGGAGCACTTCACGCCGTACCTGATGCCATCCCCGTTGCTCGAGCAGAACGCGCGCGCCGCCGCGCAGACGCTGCGCA GCGCCTGACGAGGCTCGCCC
Downstream 100 bases:
>100_bases CGGCCGGTGCGTAATGGGTGACAAGCATCGTCGTCGACGTGCGCGCCGCGACTGGCGCGCTCCGGTGTCCTGCTGGCTCG GCGCGACGCTGCTCGCGTGC
Product: putative secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MPIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVG APPGWAVREVFVAKDQHVKAGQKLLSVTRDTSFVSQANNVQGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFD ESRGLIDKQIQDQKRIVSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQ SKYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVEILPAKADGLIAELYIPSSKA GFVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTL RADIVLEKRTLLEWLFEPLYRIRQRIFGTPA
Sequences:
>Translated_431_residues MPIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVG APPGWAVREVFVAKDQHVKAGQKLLSVTRDTSFVSQANNVQGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFD ESRGLIDKQIQDQKRIVSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQ SKYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVEILPAKADGLIAELYIPSSKA GFVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTL RADIVLEKRTLLEWLFEPLYRIRQRIFGTPA >Mature_430_residues PIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVGA PPGWAVREVFVAKDQHVKAGQKLLSVTRDTSFVSQANNVQGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFDE SRGLIDKQIQDQKRIVSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQS KYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVEILPAKADGLIAELYIPSSKAG FVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLR ADIVLEKRTLLEWLFEPLYRIRQRIFGTPA
Specific function: Probably involved, in conjunction with mchF, in the secretion of microcin H47 [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR011053 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 48479; Mature: 48347
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTY CCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ANTESVMGMLTPRSGLIGVGAPPGWAVREVFVAKDQHVKAGQKLLSVTRDTSFVSQANNV CCHHHHHEEECCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFDESRGLIDKQIQDQKRIVSEY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVE HHCCCCCCEEEEEHHHCCCCCCCCHHHHHHEEECCCCCCEEEEEEECCCEECCCCCEEEE ILPAKADGLIAELYIPSSKAGFVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKE EECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEECCCEEEHHH LNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLRADIVLEKRTLLEWLFEPLY CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHH RIRQRIFGTPA HHHHHHCCCCC >Mature Secondary Structure PIRMNALREQKTPRKLTRGTTFGTVINGVVDVPISMRFFCYLSIMMFAMFIVALVRLTY CCCCHHHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ANTESVMGMLTPRSGLIGVGAPPGWAVREVFVAKDQHVKAGQKLLSVTRDTSFVSQANNV CCHHHHHEEECCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QGMRESIKRQRVEVGQQIDAAKLEYQSTIQQINQQIAAFDESRGLIDKQIQDQKRIVSEY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDLETVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKYDGSNAELKIKQEELNSKEYNIDESVNQVLYAPADGQIVRLDVVQGSVIDPPGTRVVE HHCCCCCCEEEEEHHHCCCCCCCCHHHHHHEEECCCCCCEEEEEEECCCEECCCCCEEEE ILPAKADGLIAELYIPSSKAGFVKPGQEVKLAYGSYPVEKFGTYRGKLLSVSPVAFTAKE EECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEECCCEEEHHH LNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLRADIVLEKRTLLEWLFEPLY CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHH RIRQRIFGTPA HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11181394 [H]