| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446291
Identifier: 126446291
GI number: 126446291
Start: 1367166
End: 1367600
Strand: Reverse
Name: 126446291
Synonym: BMA10247_A1403
Alternate gene names: NA
Gene position: 1367600-1367166 (Counterclockwise)
Preceding gene: 126446892
Following gene: 126445830
Centisome position: 58.13
GC content: 72.64
Gene sequence:
>435_bases GTGGCCGTTGATTTCGTTCATTTCACGCCGGGCCTGTCGTTCGCGGGTGGCCTGTTGATCGGCGCCGCGGCGGCGCTGCT CGTGTTCTTCGACGGCCGCATCGCCGGCATCAGCGGCATCGTCGGCGGGCTGCTCGCCGGCGGGCGCAGCGATGCCGGAT GGCGCGCGGCGTTTCTCGTCGGGCTGATCGCGGCCGCGGTCGCCGCGAACGCGCTCGATTGGTTTTCGATGCCGGCCGTC GACGCCGGCTGGGCGAGGGTGATCGCGGGCGGCGTGCTCGTCGGCATCGGCACGCGCTATGCGGGCGGCTGCACGAGCGG ACACGGCGTGTGCGGCATCTCGCGCGGCGCGCCGCGCTCGATCGTCGCCACGGCGGTGTTCATGGCCGCGGGCATCGCGA CGGTGTTCGTGCTGCGTCACGTGGTCGGAGGGTGA
Upstream 100 bases:
>100_bases GGCAAGAACATTTACTACGCGCTGACGAGCGAGCCCGCGGTCGCCATCATGGCCGTGCTCTACGAGCAGTTCTGCGCGAC GCACCAAAAGGGAAAGCGCC
Downstream 100 bases:
>100_bases CATGAGCTTATTGTTCGCCTTCTTGTCGGGCTTGCTGTTCGGCGCCGGGTTGCTGCTGTCCGGGATGGCGAATCCCGCGA AAGTGCAGGGCTTTCTCGAT
Product: YeeE/YedE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAVDFVHFTPGLSFAGGLLIGAAAALLVFFDGRIAGISGIVGGLLAGGRSDAGWRAAFLVGLIAAAVAANALDWFSMPAV DAGWARVIAGGVLVGIGTRYAGGCTSGHGVCGISRGAPRSIVATAVFMAAGIATVFVLRHVVGG
Sequences:
>Translated_144_residues MAVDFVHFTPGLSFAGGLLIGAAAALLVFFDGRIAGISGIVGGLLAGGRSDAGWRAAFLVGLIAAAVAANALDWFSMPAV DAGWARVIAGGVLVGIGTRYAGGCTSGHGVCGISRGAPRSIVATAVFMAAGIATVFVLRHVVGG >Mature_143_residues AVDFVHFTPGLSFAGGLLIGAAAALLVFFDGRIAGISGIVGGLLAGGRSDAGWRAAFLVGLIAAAVAANALDWFSMPAVD AGWARVIAGGVLVGIGTRYAGGCTSGHGVCGISRGAPRSIVATAVFMAAGIATVFVLRHVVGG
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 14127; Mature: 13995
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDFVHFTPGLSFAGGLLIGAAAALLVFFDGRIAGISGIVGGLLAGGRSDAGWRAAFLV CCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH GLIAAAVAANALDWFSMPAVDAGWARVIAGGVLVGIGTRYAGGCTSGHGVCGISRGAPRS HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHEECCCCCCCCCCCCCCCEEECCCCCHH IVATAVFMAAGIATVFVLRHVVGG HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVDFVHFTPGLSFAGGLLIGAAAALLVFFDGRIAGISGIVGGLLAGGRSDAGWRAAFLV CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH GLIAAAVAANALDWFSMPAVDAGWARVIAGGVLVGIGTRYAGGCTSGHGVCGISRGAPRS HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHEECCCCCCCCCCCCCCCEEECCCCCHH IVATAVFMAAGIATVFVLRHVVGG HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]