| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is yxlA [H]
Identifier: 126446222
GI number: 126446222
Start: 414238
End: 415662
Strand: Direct
Name: yxlA [H]
Synonym: BMA10247_A0465
Alternate gene names: 126446222
Gene position: 414238-415662 (Clockwise)
Preceding gene: 262192865
Following gene: 126445764
Centisome position: 17.61
GC content: 67.3
Gene sequence:
>1425_bases ATGCCGAACGCCACCGACGCCCAACGCCGAGCGCTGCGCGAACGCCGCACGATCGACTACATCCCCGACCACGAACGCCA CGGCAAGCTCTCGAGCCAGTTCACGCTATGGCTCGGCGCGAACCTGCAGGTGACGGCGATCGTCACCGGCGCGCTCGCGG TCGTGCTGGGCGGCGACGTGTCCTGGTCGCTCGTCGGCCTCGCGCTCGGTCAACTGCTGGGCGCAGCCGTGATGGCACTG CACGGCGCGCAGGGGCCGCAACTCGGCTTGCCGCAGATGATCTCGAGCCGCGTGCAGTTCGGCATCTACGGCGCGGTGAT TCCGCTCGTACTGGTCTGCCTGATGTACGTCGGCTTCTCCGCGAGCGGCACCGTGCTCGCCGGGCAGGCGCTCGCGCAAC TGTTCGGCGTCGCCGATCCGGTCGGCATCTTCGCGTTCATCGCGGTCGTCGTCGTGCTCGCGGTGTTCGGCTATCGGACG ATTCACGCGCTCGGCCGCATATCGAGCATCGTCGGCGTCGTCGCGTTCGTCTACATGTTCGTGCGGCTCCTCGCCGGCCA CGACGTGGGCGCGCTGCTCGCGATCCGGCATTTCTCGCTGTCGAGCTTCCTGCTCGCGATCTCGCTGTCCGCCTCGTGGC AGATCGCGTACGGGCCGTACGTCGCCGACTATTCTCGTTATCTGCCGCGCTCGACGTCCGCGCGGCGCACGTTCTGGGCG ATCGGTCTTGGCTCGGTGCTCGGCGCGCAGGCGTCGATGGCATTCGGCGTGTTCGCGGCGGCGCTCGCGGGCAAGCAGTT CGCCGGGCACGAGGTGCAGTTCATCGTGAGCCTCGGCGCGAGCGGCGCGACGGCCGCGCTGCTCTATTTCGCGATCGCGT TCGGCAAGCTGACGATCACGACGCTCAACGCATACGGCAGCGTGATGTCGGTCGCGACGATCGTCACCGGCTTCTCGGGC CGCGCGCAGATTACGCAGCGCGCGCGAATGGCCTATGTGCTCGCGATGGTCGCCGCGGTCGCGTGGCTCGCGCTCGTCGG TCGTCACGCATTCCTGAAGGATTTCTCCGCGTTCATCCTGTTCCTGCTCGCCTTTTTCACGCCGTGGAGCGCGATCAACC TGGTCGATTTCTACTGGGTGACGAGGGAGCGCTACGACGTGCCCGCGCTCTACGATCCCGACGGCCGCTACGGCCGCTGG AACGTCGCGGGCGTATCGATCTACGCGATCGGCGTGCTCGTGCAGATGCCGTTCATCGCGACCGAGTTCTATACCGGGCC GCTCGTCGCGAAGCTCGGCGGCACCGACATCTCGTGGATCATCGGCCTCGTCGTGCCCGGCGTTCTGTATTATGTGACGG CACGCAGGCAGACCGCGCATGTCCCCGAGCGGCTGATCCTGCCGGACGAGCCCTCATTGCCATGA
Upstream 100 bases:
>100_bases GGATGTCGGTACAAACCCGCATCCCGCAAACAGTTGTCTATACAATTTTGAGCGGCTAGGGTGAGCACTCCGAACCTCAG ACATTTCCGGATCCGCCGCC
Downstream 100 bases:
>100_bases CCGTTTCCGCCGTTGTTTCGCCGCAGCCGCAGCCACCGTCGTCATCGTCGTCGCCGGACGCGGCGCCGTTTGCCGATCCG CGCGCGCTCGATGCGCTGCA
Product: cytosine/purines/uracil/thiamine/allantoin family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MPNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDVSWSLVGLALGQLLGAAVMAL HGAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFSASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRT IHALGRISSIVGVVAFVYMFVRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWA IGLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTITTLNAYGSVMSVATIVTGFSG RAQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFILFLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRW NVAGVSIYAIGVLVQMPFIATEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP
Sequences:
>Translated_474_residues MPNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDVSWSLVGLALGQLLGAAVMAL HGAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFSASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRT IHALGRISSIVGVVAFVYMFVRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWA IGLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTITTLNAYGSVMSVATIVTGFSG RAQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFILFLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRW NVAGVSIYAIGVLVQMPFIATEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP >Mature_473_residues PNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDVSWSLVGLALGQLLGAAVMALH GAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFSASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRTI HALGRISSIVGVVAFVYMFVRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWAI GLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTITTLNAYGSVMSVATIVTGFSGR AQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFILFLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRWN VAGVSIYAIGVLVQMPFIATEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP
Specific function: Transport Of Allantoin (By Similarity). [C]
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 50769; Mature: 50638
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDV CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHCCCCC SWSLVGLALGQLLGAAVMALHGAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRTIHALGRISSIVGVVAFVYMF CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWA HHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHCCCCCCCCCEEEE IGLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTIT EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEE TLNAYGSVMSVATIVTGFSGRAQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFIL EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRWNVAGVSIYAIGVLVQMPFIA HHHHHHCCCCHHHHHHHHEEHHCCCCCCCEECCCCCCCEEEECHHHHHHHHHHHHCCHHH TEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP HHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCC >Mature Secondary Structure PNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDV CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHCCCCC SWSLVGLALGQLLGAAVMALHGAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRTIHALGRISSIVGVVAFVYMF CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWA HHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHCCCCCCCCCEEEE IGLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTIT EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEE TLNAYGSVMSVATIVTGFSGRAQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFIL EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRWNVAGVSIYAIGVLVQMPFIA HHHHHHCCCCHHHHHHHHEEHHCCCCCCCEECCCCCCCEEEECHHHHHHHHHHHHCCHHH TEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP HHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]