| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126446193
Identifier: 126446193
GI number: 126446193
Start: 1796003
End: 1796902
Strand: Reverse
Name: 126446193
Synonym: BMA10247_A1865
Alternate gene names: NA
Gene position: 1796902-1796003 (Counterclockwise)
Preceding gene: 126445817
Following gene: 126446297
Centisome position: 76.38
GC content: 64.89
Gene sequence:
>900_bases ATGCGTTGGGCCATTCTGTTCATCTTCGTCGCGTGCGCGGCGTTCACGCATCGGCGCGGCAAGGTGCGTCACGGGTTTTT CCGGCAGTTGTCCGATCATTCGACGTTCACCGCGCCGCTCAATTGTTTCGCCTATGCGTTCTCCAACGTGCCGAACACGC CGTATATCGACGACGCGCATTTTCCGGAGCTCGCGATCCTCAAGCGCGAGTGGCGCACGTTTCGCGACGAGGCGCTCGCG CTGCGCGACGCAAGCCGGATCAAGGCGTCGGGCGAGTACAACGACATCGGCTTCAATTCGTTTTTCCGCAAGGGCTGGAA GCGCTTCTACCTGAAGTGGTACGACCGCCCGCATCCGTCCGCGCTCGCGCATTGCCCGCGCTCGCTCGCGATCCTGTCGA AGCTGCCGTCGGTGAAGGCGGCGATGTTCGCGCAACTGCCGCCGGGCGGCAAGCTGGGACTGCATCGCGATCCCTACGCG GGATCGCTGCGCTATCACCTCGGGCTCTCGACGCCGAACGACGACGAATGCGCGATCGTCGTCGACGGCGATCCGTACGC GTGGCGCGACGGCGAGGCGGTGATGTTCGACGAGACTTACCTGCACTGGGCCGAGAACCGTACCGGGCACGACCGGATCA TTCTGTTCTGCGACATCGAGCGGCCGATGAAATACCGCTGGGCGCAGGCGGTGAACGGTGCGATCGGCGGGGTGCTGATG CGCGCCGCGGCGTCGCCGAACGAAACGGGCGACAGGACGGGCGGGCTCAACCGGCTGTTTCGCTATCTGTACGCCGTGCG GCGCGTCGGCAAGCGGTTGAAGGCGTGGAACCGCACCGTCTACTACGCGCTCAAGTGGGCGCTGTTCGGCGGGATTCTCA TCGCGATTCTGTGGCGCTGA
Upstream 100 bases:
>100_bases TGATTGACGCGAACGGCCCCGGCCGCCCATCCCCCACGAAAAAGCAGGAAATTGAAAGTTTTCTTAGAATCGGCCGCATA CGCTGTAACGGGGGGAAAAA
Downstream 100 bases:
>100_bases GCGATCGGTCGCGGACATCGCCGAGCGGGCCGTCGAGCGAGCGGGCGCATGGGGCCTCGGCGCCATTCGCAGGCGTGCCG CCGGTGAGCCGGTTCGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRWAILFIFVACAAFTHRRGKVRHGFFRQLSDHSTFTAPLNCFAYAFSNVPNTPYIDDAHFPELAILKREWRTFRDEALA LRDASRIKASGEYNDIGFNSFFRKGWKRFYLKWYDRPHPSALAHCPRSLAILSKLPSVKAAMFAQLPPGGKLGLHRDPYA GSLRYHLGLSTPNDDECAIVVDGDPYAWRDGEAVMFDETYLHWAENRTGHDRIILFCDIERPMKYRWAQAVNGAIGGVLM RAAASPNETGDRTGGLNRLFRYLYAVRRVGKRLKAWNRTVYYALKWALFGGILIAILWR
Sequences:
>Translated_299_residues MRWAILFIFVACAAFTHRRGKVRHGFFRQLSDHSTFTAPLNCFAYAFSNVPNTPYIDDAHFPELAILKREWRTFRDEALA LRDASRIKASGEYNDIGFNSFFRKGWKRFYLKWYDRPHPSALAHCPRSLAILSKLPSVKAAMFAQLPPGGKLGLHRDPYA GSLRYHLGLSTPNDDECAIVVDGDPYAWRDGEAVMFDETYLHWAENRTGHDRIILFCDIERPMKYRWAQAVNGAIGGVLM RAAASPNETGDRTGGLNRLFRYLYAVRRVGKRLKAWNRTVYYALKWALFGGILIAILWR >Mature_299_residues MRWAILFIFVACAAFTHRRGKVRHGFFRQLSDHSTFTAPLNCFAYAFSNVPNTPYIDDAHFPELAILKREWRTFRDEALA LRDASRIKASGEYNDIGFNSFFRKGWKRFYLKWYDRPHPSALAHCPRSLAILSKLPSVKAAMFAQLPPGGKLGLHRDPYA GSLRYHLGLSTPNDDECAIVVDGDPYAWRDGEAVMFDETYLHWAENRTGHDRIILFCDIERPMKYRWAQAVNGAIGGVLM RAAASPNETGDRTGGLNRLFRYLYAVRRVGKRLKAWNRTVYYALKWALFGGILIAILWR
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI194328779, Length=189, Percent_Identity=28.042328042328, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI14589866, Length=161, Percent_Identity=27.9503105590062, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI258613943, Length=161, Percent_Identity=27.9503105590062, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34356; Mature: 34356
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWAILFIFVACAAFTHRRGKVRHGFFRQLSDHSTFTAPLNCFAYAFSNVPNTPYIDDAH CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCC FPELAILKREWRTFRDEALALRDASRIKASGEYNDIGFNSFFRKGWKRFYLKWYDRPHPS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH ALAHCPRSLAILSKLPSVKAAMFAQLPPGGKLGLHRDPYAGSLRYHLGLSTPNDDECAIV HHHHCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE VDGDPYAWRDGEAVMFDETYLHWAENRTGHDRIILFCDIERPMKYRWAQAVNGAIGGVLM ECCCCCEECCCCEEEEEHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH RAAASPNETGDRTGGLNRLFRYLYAVRRVGKRLKAWNRTVYYALKWALFGGILIAILWR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRWAILFIFVACAAFTHRRGKVRHGFFRQLSDHSTFTAPLNCFAYAFSNVPNTPYIDDAH CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCC FPELAILKREWRTFRDEALALRDASRIKASGEYNDIGFNSFFRKGWKRFYLKWYDRPHPS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH ALAHCPRSLAILSKLPSVKAAMFAQLPPGGKLGLHRDPYAGSLRYHLGLSTPNDDECAIV HHHHCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE VDGDPYAWRDGEAVMFDETYLHWAENRTGHDRIILFCDIERPMKYRWAQAVNGAIGGVLM ECCCCCEECCCCEEEEEHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH RAAASPNETGDRTGGLNRLFRYLYAVRRVGKRLKAWNRTVYYALKWALFGGILIAILWR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA