| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446140
Identifier: 126446140
GI number: 126446140
Start: 675808
End: 676779
Strand: Reverse
Name: 126446140
Synonym: BMA10247_A0727
Alternate gene names: NA
Gene position: 676779-675808 (Counterclockwise)
Preceding gene: 126445647
Following gene: 126447688
Centisome position: 28.77
GC content: 64.51
Gene sequence:
>972_bases ATGGGGCGATTCGCATCGCCTTCGAATGATTTTTCAAACAGTGAGAAACGCCATATTTTGAGCAAGTACCAGATCGACGG CAGTGTCGTATTCGATAGTCAAGCGATGACGCTTTCTCGCGGCGACATCGTCACCACGCTTACCGCCAACGAAACCGAGC TGCTTTGCATCTTGATGCAGGGCACGGCCAGCAAGCAGGCCGTGATCGAGCAAATCTGGGAGAGCAAGGGGCTCTTCGTC ACGGAAGGCAGTTATCACCAGCTCGTGCGCGCGCTGCGCGTGAAGCTCGACGAGCAAGGCATCCCGCCCACGCAAGTGAA GACGCTGCCGCGGCTCGGCCTGCGTTTTCTCGGCTTCGCGGAGCTGCTCGACGCATCGCCGCCTTCGCCGGACGCGCACG CCGCGTCCGCCTCGCCCGCTTCGTCCGAGCCCGAACCCGCCGCCGCGCCGGCCGGCGCACAAGCGGCGCTCGCCGAAGCG ATCGCGCCGAGCGTGCCCATCGCACCGCGCGCATCGAGCGCACCGGATACGGCGAATACAGTCACTGCGCCGATCGCGGC CGCCGCACCGCCGCCATCCGCCGCGCCATCCGCGCCGCCGCCCGGCGCGGCAAGCGCGCCGTTGCCCGCCACGCGTGCCG CGCATGCGCGATCGCCGCGCCGCCGAGCAGCCTATCTCGCGATCTACGTGACGCTCGCGGCGTGGGCGAGCGTGCTCACC TGGCAAACGTTCAGGCATCGCGACAACACCTTCCGGTTCCGCTTCACGCGGACCGTCGACGGCATCCACTACTTCTCCGA CGGCCGCATGAACCAGCCCAACCTGCTGAAAGCCATCGACGTCAAACCGCTCAAGGGCAGCTTCGTCTACGAGATCGAAT TGGGATCGAACGACTGGCTCGCGGTATGTCCGGAATCCATCTACGAAACACCTGAACTGTGCCAAGCCTATTTCTTCGAA AAGAACAACTGA
Upstream 100 bases:
>100_bases GCGCGGCAGCGCGGCTTCCACACGCGCCGCCATCGCTCAGGACTCGAAAAGAAATACGCGCAATACGCAATTCGATGCGT ACTCGCTCGAGTCAGCCCGG
Downstream 100 bases:
>100_bases TCGCGCTGTGCGTGGTGGCGCTGAGCGGATGGACGGCCTGGTACGTCACGGTCGGCGCGTATCGCGACCTGCCGGGCGGC AAATGCGTGATCCGCCAGCC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator CadC
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MGRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQGTASKQAVIEQIWESKGLFV TEGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFAELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEA IAPSVPIAPRASSAPDTANTVTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLT WQTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWLAVCPESIYETPELCQAYFFE KNN
Sequences:
>Translated_323_residues MGRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQGTASKQAVIEQIWESKGLFV TEGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFAELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEA IAPSVPIAPRASSAPDTANTVTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLT WQTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWLAVCPESIYETPELCQAYFFE KNN >Mature_322_residues GRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQGTASKQAVIEQIWESKGLFVT EGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFAELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEAI APSVPIAPRASSAPDTANTVTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLTW QTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWLAVCPESIYETPELCQAYFFEK NN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34685; Mature: 34554
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQ CCCCCCCCCCCCCCHHHHHHHHEECCCEEEECCCCEEEECCCEEEEEECCCCEEEEEEEC GTASKQAVIEQIWESKGLFVTEGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFA CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEAIAPSVPIAPRASSAPDTANT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC VTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLT EECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WQTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWL HHHHHCCCCEEEEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEE AVCPESIYETPELCQAYFFEKNN EECCHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure GRFASPSNDFSNSEKRHILSKYQIDGSVVFDSQAMTLSRGDIVTTLTANETELLCILMQ CCCCCCCCCCCCCHHHHHHHHEECCCEEEECCCCEEEECCCEEEEEECCCCEEEEEEEC GTASKQAVIEQIWESKGLFVTEGSYHQLVRALRVKLDEQGIPPTQVKTLPRLGLRFLGFA CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ELLDASPPSPDAHAASASPASSEPEPAAAPAGAQAALAEAIAPSVPIAPRASSAPDTANT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC VTAPIAAAAPPPSAAPSAPPPGAASAPLPATRAAHARSPRRRAAYLAIYVTLAAWASVLT EECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WQTFRHRDNTFRFRFTRTVDGIHYFSDGRMNQPNLLKAIDVKPLKGSFVYEIELGSNDWL HHHHHCCCCEEEEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEE AVCPESIYETPELCQAYFFEKNN EECCHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA