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The map label for this gene is 126446101

Identifier: 126446101

GI number: 126446101

Start: 1610459

End: 1610953

Strand: Direct

Name: 126446101

Synonym: BMA10247_A1672

Alternate gene names: NA

Gene position: 1610459-1610953 (Clockwise)

Preceding gene: 126446042

Following gene: 126446866

Centisome position: 68.45

GC content: 65.25

Gene sequence:

>495_bases
ATGACAACGAACGGATCCGTCGCACCCAAAGAGCGGGTCAACATCGTCTATCGCCCGGCGACGGGCGACGCGCAGGCGGA
GGTCGAGCTGCCGCTCAAGGTGCTCGTGCTCGGCGAGTTCTCGACGGCCGCCGACAAGCCGCCGCTCGAGGAGCTCTCGC
CCGTGAACGTCGACAAGGACGACTTCAACGACGTGATGAGGGCGCAGAACCTCCAGCTCGCGCTCAGCGTGCCGAACCTG
CTGGACGATCAGGCCGGCGAGGACGACCGGCTGTCCGTCACGCTCGGCTTCGATTCGGTGCACGATTTCTCGCCCGACGC
GATCGTCGAGAAAGTGCCCGAGCTCAAGCAGCTGATCGCGCTGCGCGACGCGCTGAAAGCGCTGAAGAGCCCGATCGGCA
ACATTCCCGGCTTTCGCAGGCGCATCCAGGAGATCGTCGCCGACAAGGGCGCGCGCAAGCAGTTGCTCGACGAACTCGGC
CTCGACGAACAATGA

Upstream 100 bases:

>100_bases
CTTGCCGCGCCGATGCGGCTTTTGAGCGTTTCGTGCAAAACGCCGCGCGCATCCGCGCACGACCGTCGCCCGCGAGCGAC
AACGAAGAGGAGAACCCAAC

Downstream 100 bases:

>100_bases
ACCGCGACACGGAACAGACGACCATGGAAGGCGAACACCTGCAATCCCCGAAGCACGACGACGCGCCGGACGCGACGCCG
CCCGAGTCCCCCGCCTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss S; Protein ImpB; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Intracellular Growth Locus Subunit A; Type VI Secretion; Conserved Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTTNGSVAPKERVNIVYRPATGDAQAEVELPLKVLVLGEFSTAADKPPLEELSPVNVDKDDFNDVMRAQNLQLALSVPNL
LDDQAGEDDRLSVTLGFDSVHDFSPDAIVEKVPELKQLIALRDALKALKSPIGNIPGFRRRIQEIVADKGARKQLLDELG
LDEQ

Sequences:

>Translated_164_residues
MTTNGSVAPKERVNIVYRPATGDAQAEVELPLKVLVLGEFSTAADKPPLEELSPVNVDKDDFNDVMRAQNLQLALSVPNL
LDDQAGEDDRLSVTLGFDSVHDFSPDAIVEKVPELKQLIALRDALKALKSPIGNIPGFRRRIQEIVADKGARKQLLDELG
LDEQ
>Mature_163_residues
TTNGSVAPKERVNIVYRPATGDAQAEVELPLKVLVLGEFSTAADKPPLEELSPVNVDKDDFNDVMRAQNLQLALSVPNLL
DDQAGEDDRLSVTLGFDSVHDFSPDAIVEKVPELKQLIALRDALKALKSPIGNIPGFRRRIQEIVADKGARKQLLDELGL
DEQ

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17953; Mature: 17821

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNGSVAPKERVNIVYRPATGDAQAEVELPLKVLVLGEFSTAADKPPLEELSPVNVDKD
CCCCCCCCHHHHCEEEEECCCCCCCEEEECCEEEEEEECCCCCCCCCCHHHCCCCCCCHH
DFNDVMRAQNLQLALSVPNLLDDQAGEDDRLSVTLGFDSVHDFSPDAIVEKVPELKQLIA
HHHHHHHHCCCEEEEECCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
LRDALKALKSPIGNIPGFRRRIQEIVADKGARKQLLDELGLDEQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTNGSVAPKERVNIVYRPATGDAQAEVELPLKVLVLGEFSTAADKPPLEELSPVNVDKD
CCCCCCCHHHHCEEEEECCCCCCCEEEECCEEEEEEECCCCCCCCCCHHHCCCCCCCHH
DFNDVMRAQNLQLALSVPNLLDDQAGEDDRLSVTLGFDSVHDFSPDAIVEKVPELKQLIA
HHHHHHHHCCCEEEEECCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
LRDALKALKSPIGNIPGFRRRIQEIVADKGARKQLLDELGLDEQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA