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The map label for this gene is yodT [H]

Identifier: 126446091

GI number: 126446091

Start: 2327776

End: 2329122

Strand: Reverse

Name: yodT [H]

Synonym: BMA10247_A2387

Alternate gene names: 126446091

Gene position: 2329122-2327776 (Counterclockwise)

Preceding gene: 126446772

Following gene: 126447803

Centisome position: 99.0

GC content: 69.86

Gene sequence:

>1347_bases
ATGACCACCGTATTTCACCGCGCGCCGCGCGCGAGCCTGCCGATCGCGGTTGCGGGCGACGGCATCGAGATCGTCGATTC
GACCGGCAAGCGCTACATCGATGCGTGCGGCGGCGCCGCGGTGTCGTGCCTCGGGCACAGCAATCAGCGCGTGATCGACG
CGATCAAGCGGCAGGCGCAGCAACTGCCGTACGCGCACACGTCGTTCTTCACGACGCAGCCGGCCGAGGCGCTCGCGGAC
CGGCTCGTTGCCGCCGCGCCCGCGGGGCTCGAGCACGTGTACTTCGTGTCGGGCGGATCGGAGGCGATCGAGGCCGCGCT
GAAGCTCGCGCGCCAGTATTTCGTCGAGAAGGGCGAGCCCGCGCGCCGGCATTTCATCGCGCGCCGGCAGAGCTATCACG
GCAACACGCTCGGCGCGCTCGCGATCGGCGGCAATGCATGGCGGCGCGAACCGTTCGTGCCGCTTCTGATCGAAGCGCAC
CACGTGAGCCCGTGCTACGCGTACCGCGAGCAGCGCGCGGACGAAACCGAAGAAGCGTTCGCGCAGCGCCTGGCCGACGA
GCTCGAAAGCCGGATTCTCGCGCTCGGGCCGGATACGGTTGCGGCATTTGTCGCGGAGACGGTCGTCGGCGCGACGGCGG
GCGCGGTGCCGCCCGTGCGCGAGTATTTCCGCAAGATCCGCGCGGTGTGCGACAAGTACGGCGTGCTGCTGATTCTCGAC
GAGATCATGTCGGGGATGGGCCGCACCGGCTATCTGTTCGCGTGCGAGGAAGACGGCGTCGCGCCCGATCTCCTGACGAT
CGCGAAGGGGCTCGGCGCCGGCTATCAGCCGATCGGCGCGACGCTCGTGAGCGATGCGATCTACCGGACGATCGTCGACG
GCTCGGGCTTCTTTCAGCACGGCCACACGTACGTCGGCCACGCGAGCGCGTGCGCGGCCGCGCTCGAGGTGCAGCGCGTG
ATCGACGAGGAGCGGCTGCTCGAGAACGTGAAGGCGCGCGGCGAGCAATTGCGCGCATCGCTCGCCGCGCGCTCGGCCGA
GCAGCCGCACATCGGCGACGTGCGCGGCCGCGGGCTCTTCGTCGGCGTCGAGCTCGTGCGCGATCGCGACACGAAGGCGC
CGTTCGATCCGCGGCTGAAGCTCAATGCGCTCGTCAAGCGCGAGGCGATGCAGCGCGGGCTGATGGTGTATCCGATGGGC
GGCACCGTCGACGGCCATCTCGGCGATCATGTCCTGCTCGCGCCGCCGTTCATCTGCACCGCGCCGCAGATCGACACGAT
CGTCGAGCGGCTCGGCGACGCGATCGACGCGGCACTCGCGTCGATCGGCGCGGCGGCGTTGCGCTGA

Upstream 100 bases:

>100_bases
TTGCGTTCGAGGTGCGCGAGCGGGGCCGGGTACGCTTTCAGCAATTCGTGCCGCGGGACGCGCAGCGTCCGCCGGTGCAT
CGACACGAACGAGGACACGC

Downstream 100 bases:

>100_bases
CGCACCAACCTTGTTTCGTCGAACCGACATGAGGAAAACGAAGATGAGGCTTCCTGAATTCAATCGCGACACCGCGACCG
ACGAACAGAAGGCCGTGCTC

Product: hypothetical protein

Products: L-Glutamate; L-Glutamate 5-semialdehyde [C]

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MTTVFHRAPRASLPIAVAGDGIEIVDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQAQQLPYAHTSFFTTQPAEALAD
RLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAH
HVSPCYAYREQRADETEEAFAQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILD
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQHGHTYVGHASACAAALEVQRV
IDEERLLENVKARGEQLRASLAARSAEQPHIGDVRGRGLFVGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMG
GTVDGHLGDHVLLAPPFICTAPQIDTIVERLGDAIDAALASIGAAALR

Sequences:

>Translated_448_residues
MTTVFHRAPRASLPIAVAGDGIEIVDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQAQQLPYAHTSFFTTQPAEALAD
RLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAH
HVSPCYAYREQRADETEEAFAQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILD
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQHGHTYVGHASACAAALEVQRV
IDEERLLENVKARGEQLRASLAARSAEQPHIGDVRGRGLFVGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMG
GTVDGHLGDHVLLAPPFICTAPQIDTIVERLGDAIDAALASIGAAALR
>Mature_447_residues
TTVFHRAPRASLPIAVAGDGIEIVDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQAQQLPYAHTSFFTTQPAEALADR
LVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEPARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAHH
VSPCYAYREQRADETEEAFAQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILDE
IMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQHGHTYVGHASACAAALEVQRVI
DEERLLENVKARGEQLRASLAARSAEQPHIGDVRGRGLFVGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMGG
TVDGHLGDHVLLAPPFICTAPQIDTIVERLGDAIDAALASIGAAALR

Specific function: Unknown

COG id: COG0161

COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI13994255, Length=436, Percent_Identity=27.7522935779816, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI37574042, Length=382, Percent_Identity=29.8429319371728, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI226442705, Length=374, Percent_Identity=29.4117647058824, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI4557809, Length=426, Percent_Identity=26.7605633802817, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI226442709, Length=342, Percent_Identity=30.1169590643275, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI24119277, Length=411, Percent_Identity=27.9805352798054, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI284507298, Length=342, Percent_Identity=28.6549707602339, Blast_Score=107, Evalue=3e-23,
Organism=Escherichia coli, GI145693181, Length=352, Percent_Identity=34.0909090909091, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1788044, Length=437, Percent_Identity=31.8077803203661, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI1789759, Length=421, Percent_Identity=31.8289786223278, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1786991, Length=435, Percent_Identity=31.264367816092, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1789016, Length=386, Percent_Identity=31.6062176165803, Blast_Score=165, Evalue=7e-42,
Organism=Escherichia coli, GI1787560, Length=426, Percent_Identity=30.0469483568075, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1786349, Length=269, Percent_Identity=29.368029739777, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32564660, Length=442, Percent_Identity=30.5429864253394, Blast_Score=157, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI71992977, Length=388, Percent_Identity=28.6082474226804, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI25144271, Length=433, Percent_Identity=26.5588914549654, Blast_Score=141, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI25144274, Length=244, Percent_Identity=31.1475409836066, Blast_Score=118, Evalue=7e-27,
Organism=Saccharomyces cerevisiae, GI6324432, Length=351, Percent_Identity=32.1937321937322, Blast_Score=156, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6323470, Length=451, Percent_Identity=29.0465631929047, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6324386, Length=493, Percent_Identity=22.5152129817444, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21357415, Length=422, Percent_Identity=29.6208530805687, Blast_Score=154, Evalue=8e-38,
Organism=Drosophila melanogaster, GI161085790, Length=447, Percent_Identity=27.0693512304251, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI28574759, Length=381, Percent_Identity=29.1338582677165, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI21356575, Length=431, Percent_Identity=28.538283062645, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI281366494, Length=391, Percent_Identity=26.5984654731458, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24667139, Length=391, Percent_Identity=26.5984654731458, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24667143, Length=391, Percent_Identity=26.5984654731458, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: 2.6.1.13 [C]

Molecular weight: Translated: 48142; Mature: 48011

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVFHRAPRASLPIAVAGDGIEIVDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQAQ
CCCCCCCCCCCCCCEEEECCCEEEECCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHH
QLPYAHTSFFTTQPAEALADRLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEP
HCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCH
ARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAHHVSPCYAYREQRADETEEAF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHH
AQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILD
HHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQH
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHC
GHTYVGHASACAAALEVQRVIDEERLLENVKARGEQLRASLAARSAEQPHIGDVRGRGLF
CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMGGTVDGHLGDHVLLAPPFICT
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEC
APQIDTIVERLGDAIDAALASIGAAALR
CCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTVFHRAPRASLPIAVAGDGIEIVDSTGKRYIDACGGAAVSCLGHSNQRVIDAIKRQAQ
CCCCCCCCCCCCCEEEECCCEEEECCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHH
QLPYAHTSFFTTQPAEALADRLVAAAPAGLEHVYFVSGGSEAIEAALKLARQYFVEKGEP
HCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCH
ARRHFIARRQSYHGNTLGALAIGGNAWRREPFVPLLIEAHHVSPCYAYREQRADETEEAF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHH
AQRLADELESRILALGPDTVAAFVAETVVGATAGAVPPVREYFRKIRAVCDKYGVLLILD
HHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
EIMSGMGRTGYLFACEEDGVAPDLLTIAKGLGAGYQPIGATLVSDAIYRTIVDGSGFFQH
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHC
GHTYVGHASACAAALEVQRVIDEERLLENVKARGEQLRASLAARSAEQPHIGDVRGRGLF
CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VGVELVRDRDTKAPFDPRLKLNALVKREAMQRGLMVYPMGGTVDGHLGDHVLLAPPFICT
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEC
APQIDTIVERLGDAIDAALASIGAAALR
CCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Oxoglutarate; Ornithine [C]

Specific reaction: 2-Oxoglutarate + Ornithine --> L-Glutamate + L-Glutamate 5-semialdehyde [C]

General reaction: Amino group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]