| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is mrcA [H]
Identifier: 126445996
GI number: 126445996
Start: 2277532
End: 2280066
Strand: Reverse
Name: mrcA [H]
Synonym: BMA10247_A2346
Alternate gene names: 126445996
Gene position: 2280066-2277532 (Counterclockwise)
Preceding gene: 126446583
Following gene: 126447116
Centisome position: 96.91
GC content: 71.72
Gene sequence:
>2535_bases GTGAACCGCCGAATCGTGTCGTCCTTCCTCGAGCGTTGCGCGGCCTGGCTCGCCGCCGCGAAGCCGCACGCCGTCGCCGT CCTGCACCGCCTGCGCCACCCGACGCGGCGCGGCGTGCTGCTCGCCGTCGCCGCTCTCCCCGCGCTGTGCGTGCTCTACG TGCTCGCGCTGATCCCGTTCACGCCGAGCATCGGCGACATCCGCAAGGCGCGCGTCGACGCGCCCGCGCAGATCCTGTCC GCCGACGGCAAGCTGCTCGCCGAGTTCAAGCCGTCGAACCGCGAATGGGTGCCGCTCGCCGACATCTCGCCGAAGATGGT CGACGCGCTGATCTCGACCGAGGACCATCGCTTCTACGAGCACCACGGCCTCGACTGGCGGCGCACCGCGGGCGCCGCGC TGCGCACGTTCTCCGGCGACCGGCAGGGCGGCTCGACGATCACGCAGCAGCTCGCGCGCAACCTGTATCCGGACGAGATC GGCCGCGCGCCGACGCTCACGCGCAAGCTGAAGGAAGCGATCACCGCGCTGAAGATCGAGGCGGTCTACAGCAAGGCGCA GATCCTCGAGACGTATCTGAACACGGTGCCGTTCCTGTACAACGCGTACGGCGTCGAGATGGCCGCGCGCACGTACTTCG ACAAATCGGCCGACCAGCTCGACGCGCTCGACGCGGCGACGCTCGTCGGCATGCTCAAGGGCAACAGCTATTACAACCCG GTGCTAAACCCCGAGCGCGCGCTCGCGCGCCGCAACACGGTGCTCGCGCAGATGGTGAAGTACGGCAGGCTCTCGCCCGC CGCGTATGCGTCGCTGCAGAAGAAGCCGCTGCGCATCGATTTCGAGCGGCAGAAGGAGCCGCCCGGCCCCGCGCCGCATT TCGCGCAGCAACTGCGCAAGTGGCTGATCGCGTGGGCCGACCGCAACGATTACAACATCTACTCCGACGGCCTCGTCGTG CGCACGACGATCGATTCGCGGCTGCAGACGTATGCGACGCAGGCGCTCGCGCGTCAGACCAACCAGCTGCAGGGCGTCGC GAACGGGATGTGGAACGCCGGCAGCGGCTGCGCCCCCGGCAATCCGCTGTTTCGCGCATTCGTGCGCGAGACGCCGGAGT TCCGCGCGGCGCTCGACGGCGGCGCGACCGGGGACGCCGCGCTCAAGCGCCTGCTCGCCGACCGCGGCTTCGCGCGCGCG CTCTGCAAGGCGAAGGCCGACGTGCAGGCGGGCTTTCTCGCGATCGATCCGCGCAACGGGCAGATCAAGGCGTGGGTCGG CAGCCGCGATTTCACGGCCGAGCCGTTCGATCACGTGCAGCAGGCGCGCCGGCAGCCGGGCTCGACGTTCAAGCCGTTCG TCTACGGCGCGGCGTTCGCGGCGGGCGCGACGCCCGACGATACGTTCGTCGATCAGCCGGTCGAGATCCCGCTCGCGGGC GGCGAGATCTGGCGGCCCGACGACGACGCGCCGCCCACGAACAAGCCGATGACGCTGCGCGACGCGATCGCGTACTCGCG CAACCGGATCACCGCGCAACTGATGATGAAGGTCGGCCCGCAGAAGGTGGCGCGCCTCGCGCGCGCGATGGGCGTGCGCG ACAGCGCGCTCGATGCGGTGCCGTCGCTCGCGCTCGGCACGAGCCCCGTGACGCTCAAGGAGATGGTGTCCGCCTACGCG ACGATCGCGAACGTCGGCGAATACGTCGAGCCGCGGATGGTCACGCGCATCGAGGGCCGCAACGGCGAGGTGCTCGCCGA GTTCGCGAGCGCGACGCCCGAGCGCGCGCTCGACGCGGCGGCGGCGCGCACGCTGATCGACGTGATGCGCGGCGTCGTCG AGCGCGGCACCGGCGCGGCGATCCGCTCGCGCTACGGGATTCGCGCGGACGTCGCCGGCAAGACCGGCACGACGCAGGGC GACACCGACGGCTGGTTCATCCTGATGCAGCCCGAGCTTGTCGCGGGCGCGTGGGTCGGCTTCGACGACGGCCGCGTGAC GCTAGGCGGCGATTGGGGGCAAGGCGCGCGCAGCGCGCTGCCGATCGTCGGCGATTTCTATCAGCGGGCGATTCGCGCGC GGCTCGTCGATACGCGCGAACGCTTCGCGACCGAAGCGCCGCCGAGCGCGTTCGACACGTTCCGCAACAAGCTCGGCGAC TGGTATCGCTACCTGTTCGAGAAGCCCGAGCCGCCGCGCAAGGCCGCGCCGCCGAAAGCGCCGCGCGCGCCGCTCGAGGA GGTGATGCCGGCTTCCGAGGTCGAGGCGGCGTCGGCGGCGGTCGCGCGCGCCGCGTCGGAAGCGGCTGCAGTGGCATCGG CCGCGTCGACCGCATCGGCCGCACCGCCGGCGAGCGGCGTGCCGTTCGCGCCGGGCGGCGCGTCGGCGCCGGCGCTGCCG CCGCTGTTGCCGCCGATGCCACAGTCTGCTCCGTTGCCGCCTGCCGCGCAGCCGGGCAGCAGCCTGCCGAACGACAACGC GCCGATGTCGCCGACGCCGACGCCCGATGCGCCGGCCGCGGGCGGCAGCAATTAG
Upstream 100 bases:
>100_bases ACCCGAACCCACATCCACGCGCCGAATCCGCCCTCCCGCCGCGCCCTGGCCGCCGCGTTTGGTACGATTCACGCTTTCCC ATCCCCATTCGCCTCACCGC
Downstream 100 bases:
>100_bases CGAAGACCGGCGGCGACGGTTCGTTCGCGGCGCGCGTTGCGTTGCCCCGTCGCTTTGGCCGCCGCCGCCGCCCGCCTCGG CCCGCGTCGACCCGCTTCGC
Product: penicillin-binding protein
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MNRRIVSSFLERCAAWLAAAKPHAVAVLHRLRHPTRRGVLLAVAALPALCVLYVLALIPFTPSIGDIRKARVDAPAQILS ADGKLLAEFKPSNREWVPLADISPKMVDALISTEDHRFYEHHGLDWRRTAGAALRTFSGDRQGGSTITQQLARNLYPDEI GRAPTLTRKLKEAITALKIEAVYSKAQILETYLNTVPFLYNAYGVEMAARTYFDKSADQLDALDAATLVGMLKGNSYYNP VLNPERALARRNTVLAQMVKYGRLSPAAYASLQKKPLRIDFERQKEPPGPAPHFAQQLRKWLIAWADRNDYNIYSDGLVV RTTIDSRLQTYATQALARQTNQLQGVANGMWNAGSGCAPGNPLFRAFVRETPEFRAALDGGATGDAALKRLLADRGFARA LCKAKADVQAGFLAIDPRNGQIKAWVGSRDFTAEPFDHVQQARRQPGSTFKPFVYGAAFAAGATPDDTFVDQPVEIPLAG GEIWRPDDDAPPTNKPMTLRDAIAYSRNRITAQLMMKVGPQKVARLARAMGVRDSALDAVPSLALGTSPVTLKEMVSAYA TIANVGEYVEPRMVTRIEGRNGEVLAEFASATPERALDAAAARTLIDVMRGVVERGTGAAIRSRYGIRADVAGKTGTTQG DTDGWFILMQPELVAGAWVGFDDGRVTLGGDWGQGARSALPIVGDFYQRAIRARLVDTRERFATEAPPSAFDTFRNKLGD WYRYLFEKPEPPRKAAPPKAPRAPLEEVMPASEVEAASAAVARAASEAAAVASAASTASAAPPASGVPFAPGGASAPALP PLLPPMPQSAPLPPAAQPGSSLPNDNAPMSPTPTPDAPAAGGSN
Sequences:
>Translated_844_residues MNRRIVSSFLERCAAWLAAAKPHAVAVLHRLRHPTRRGVLLAVAALPALCVLYVLALIPFTPSIGDIRKARVDAPAQILS ADGKLLAEFKPSNREWVPLADISPKMVDALISTEDHRFYEHHGLDWRRTAGAALRTFSGDRQGGSTITQQLARNLYPDEI GRAPTLTRKLKEAITALKIEAVYSKAQILETYLNTVPFLYNAYGVEMAARTYFDKSADQLDALDAATLVGMLKGNSYYNP VLNPERALARRNTVLAQMVKYGRLSPAAYASLQKKPLRIDFERQKEPPGPAPHFAQQLRKWLIAWADRNDYNIYSDGLVV RTTIDSRLQTYATQALARQTNQLQGVANGMWNAGSGCAPGNPLFRAFVRETPEFRAALDGGATGDAALKRLLADRGFARA LCKAKADVQAGFLAIDPRNGQIKAWVGSRDFTAEPFDHVQQARRQPGSTFKPFVYGAAFAAGATPDDTFVDQPVEIPLAG GEIWRPDDDAPPTNKPMTLRDAIAYSRNRITAQLMMKVGPQKVARLARAMGVRDSALDAVPSLALGTSPVTLKEMVSAYA TIANVGEYVEPRMVTRIEGRNGEVLAEFASATPERALDAAAARTLIDVMRGVVERGTGAAIRSRYGIRADVAGKTGTTQG DTDGWFILMQPELVAGAWVGFDDGRVTLGGDWGQGARSALPIVGDFYQRAIRARLVDTRERFATEAPPSAFDTFRNKLGD WYRYLFEKPEPPRKAAPPKAPRAPLEEVMPASEVEAASAAVARAASEAAAVASAASTASAAPPASGVPFAPGGASAPALP PLLPPMPQSAPLPPAAQPGSSLPNDNAPMSPTPTPDAPAAGGSN >Mature_844_residues MNRRIVSSFLERCAAWLAAAKPHAVAVLHRLRHPTRRGVLLAVAALPALCVLYVLALIPFTPSIGDIRKARVDAPAQILS ADGKLLAEFKPSNREWVPLADISPKMVDALISTEDHRFYEHHGLDWRRTAGAALRTFSGDRQGGSTITQQLARNLYPDEI GRAPTLTRKLKEAITALKIEAVYSKAQILETYLNTVPFLYNAYGVEMAARTYFDKSADQLDALDAATLVGMLKGNSYYNP VLNPERALARRNTVLAQMVKYGRLSPAAYASLQKKPLRIDFERQKEPPGPAPHFAQQLRKWLIAWADRNDYNIYSDGLVV RTTIDSRLQTYATQALARQTNQLQGVANGMWNAGSGCAPGNPLFRAFVRETPEFRAALDGGATGDAALKRLLADRGFARA LCKAKADVQAGFLAIDPRNGQIKAWVGSRDFTAEPFDHVQQARRQPGSTFKPFVYGAAFAAGATPDDTFVDQPVEIPLAG GEIWRPDDDAPPTNKPMTLRDAIAYSRNRITAQLMMKVGPQKVARLARAMGVRDSALDAVPSLALGTSPVTLKEMVSAYA TIANVGEYVEPRMVTRIEGRNGEVLAEFASATPERALDAAAARTLIDVMRGVVERGTGAAIRSRYGIRADVAGKTGTTQG DTDGWFILMQPELVAGAWVGFDDGRVTLGGDWGQGARSALPIVGDFYQRAIRARLVDTRERFATEAPPSAFDTFRNKLGD WYRYLFEKPEPPRKAAPPKAPRAPLEEVMPASEVEAASAAVARAASEAAAVASAASTASAAPPASGVPFAPGGASAPALP PLLPPMPQSAPLPPAAQPGSSLPNDNAPMSPTPTPDAPAAGGSN
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=588, Percent_Identity=31.4625850340136, Blast_Score=262, Evalue=9e-71, Organism=Escherichia coli, GI1786343, Length=589, Percent_Identity=29.8811544991511, Blast_Score=185, Evalue=1e-47, Organism=Escherichia coli, GI1788867, Length=270, Percent_Identity=31.4814814814815, Blast_Score=103, Evalue=6e-23, Organism=Escherichia coli, GI1789601, Length=174, Percent_Identity=37.3563218390805, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.- [C]
Molecular weight: Translated: 90751; Mature: 90751
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRIVSSFLERCAAWLAAAKPHAVAVLHRLRHPTRRGVLLAVAALPALCVLYVLALIPF CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPSIGDIRKARVDAPAQILSADGKLLAEFKPSNREWVPLADISPKMVDALISTEDHRFYE CCCHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCCHHHHH HHGLDWRRTAGAALRTFSGDRQGGSTITQQLARNLYPDEIGRAPTLTRKLKEAITALKIE HCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHH AVYSKAQILETYLNTVPFLYNAYGVEMAARTYFDKSADQLDALDAATLVGMLKGNSYYNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC VLNPERALARRNTVLAQMVKYGRLSPAAYASLQKKPLRIDFERQKEPPGPAPHFAQQLRK CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEECHHHCCCCCCCCHHHHHHHHH WLIAWADRNDYNIYSDGLVVRTTIDSRLQTYATQALARQTNQLQGVANGMWNAGSGCAPG HHHHHCCCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NPLFRAFVRETPEFRAALDGGATGDAALKRLLADRGFARALCKAKADVQAGFLAIDPRNG CHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEECCCCC QIKAWVGSRDFTAEPFDHVQQARRQPGSTFKPFVYGAAFAAGATPDDTFVDQPVEIPLAG EEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECC GEIWRPDDDAPPTNKPMTLRDAIAYSRNRITAQLMMKVGPQKVARLARAMGVRDSALDAV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH PSLALGTSPVTLKEMVSAYATIANVGEYVEPRMVTRIEGRNGEVLAEFASATPERALDAA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCHHHHHHHH AARTLIDVMRGVVERGTGAAIRSRYGIRADVAGKTGTTQGDTDGWFILMQPELVAGAWVG HHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCHHHHEEEE FDDGRVTLGGDWGQGARSALPIVGDFYQRAIRARLVDTRERFATEAPPSAFDTFRNKLGD CCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH WYRYLFEKPEPPRKAAPPKAPRAPLEEVMPASEVEAASAAVARAASEAAAVASAASTASA HHHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APPASGVPFAPGGASAPALPPLLPPMPQSAPLPPAAQPGSSLPNDNAPMSPTPTPDAPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSN CCCC >Mature Secondary Structure MNRRIVSSFLERCAAWLAAAKPHAVAVLHRLRHPTRRGVLLAVAALPALCVLYVLALIPF CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPSIGDIRKARVDAPAQILSADGKLLAEFKPSNREWVPLADISPKMVDALISTEDHRFYE CCCHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCCHHHHH HHGLDWRRTAGAALRTFSGDRQGGSTITQQLARNLYPDEIGRAPTLTRKLKEAITALKIE HCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHH AVYSKAQILETYLNTVPFLYNAYGVEMAARTYFDKSADQLDALDAATLVGMLKGNSYYNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC VLNPERALARRNTVLAQMVKYGRLSPAAYASLQKKPLRIDFERQKEPPGPAPHFAQQLRK CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEECHHHCCCCCCCCHHHHHHHHH WLIAWADRNDYNIYSDGLVVRTTIDSRLQTYATQALARQTNQLQGVANGMWNAGSGCAPG HHHHHCCCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NPLFRAFVRETPEFRAALDGGATGDAALKRLLADRGFARALCKAKADVQAGFLAIDPRNG CHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEECCCCC QIKAWVGSRDFTAEPFDHVQQARRQPGSTFKPFVYGAAFAAGATPDDTFVDQPVEIPLAG EEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECC GEIWRPDDDAPPTNKPMTLRDAIAYSRNRITAQLMMKVGPQKVARLARAMGVRDSALDAV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH PSLALGTSPVTLKEMVSAYATIANVGEYVEPRMVTRIEGRNGEVLAEFASATPERALDAA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCHHHHHHHH AARTLIDVMRGVVERGTGAAIRSRYGIRADVAGKTGTTQGDTDGWFILMQPELVAGAWVG HHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCHHHHEEEE FDDGRVTLGGDWGQGARSALPIVGDFYQRAIRARLVDTRERFATEAPPSAFDTFRNKLGD CCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH WYRYLFEKPEPPRKAAPPKAPRAPLEEVMPASEVEAASAAVARAASEAAAVASAASTASA HHHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APPASGVPFAPGGASAPALPPLLPPMPQSAPLPPAAQPGSSLPNDNAPMSPTPTPDAPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA