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The map label for this gene is dedA [C]

Identifier: 126445919

GI number: 126445919

Start: 1649833

End: 1650978

Strand: Reverse

Name: dedA [C]

Synonym: BMA10247_A1715

Alternate gene names: 126445919

Gene position: 1650978-1649833 (Counterclockwise)

Preceding gene: 126447560

Following gene: 126447652

Centisome position: 70.17

GC content: 71.12

Gene sequence:

>1146_bases
ATGCCGATCCACGCCGCGCACGCGCCGCGGCGGGCGTCGCGGCTGTCCGCGGCGCCCATGCCACCCGGCTCGGCATTCGT
CGCGTTCGAGGTGCGTTTCGTGTGGCATTTTCCCCAGGCTGTTCCCGCATCGCTCGGTCCGTGGGCCGTGTTCGCCAGCG
TGCTCGTCACGCAGCTCGGCATGCCCGTGCCCGCCGTGCCGATGCTGATCGTCGGCGGCACGATGGCGGCGATGGGGCAG
GCGTCCTATGCGAGCATGCTCGTCGCGGCCGTGGCCGCGACGGTGCTCGCCGATTCGATGTGGTTCTTCGCCGGCCGCGC
GCGCGGCCGGCGGCTCCTCAACGCGCTCGTGCGCTTCTCGCTGTCGCTCGACACGACGCTGCGCATCGCGCGCAAGGTGT
TCGAAAAGCACGGCGCGCCGCTGCTCGTGCTCGCGAAGTTCCTGCCGGGCCTGGGGCTCGTGTCCGCGCCGCTGCTCGGC
ACGACGGCCGTCGCCGTGTGGGTGTTCCTGTTCTGGGACGTGGCGGGTGCGTCGCTCTGGGCGAGCGTGTGGCTTTTCGG
CGGCGCGGCGCTGCATGACGAGATCGTGCGCCTGATGCAGTGGGTGAGCGCGAGCGGCGGCACGCTGTTCGACGCGTTCG
CCGCGATCTTCGTCACGTTCCTGCTGTACCGCTGGGCGATGCGCATGCGCTTTCGCCGCTGGCTCGCGAAGATCCGCATC
AGCCCGCAGCAGCTCGACGCGATGCTCAAGTCGGCCGCGCCGCCCATCGTGTTCGACGCGCGGCCGCGCGCGGTGCGCGA
GAAGGAGGCGTACCGGATCGCGGGCGCGTATCCGCTCGATCTCGATTCGCCGGATCCGCTGCATCCCGATCTGATGACGC
GGCCGATCGTCGTTTATTGCGTGTGTCCGAACGAAGCCACCGCGAAGCGCATCGTCAGCCAGCTTCAGCGCAAGCGCATC
CGCCATGCGCTCGCGCTGAAGGGCGGTCTCGACGCGTGGGAGAAGCACGGCTATCCGGTCGAGCCGCTGCCCGCCGATTT
CGATGCCGCGCGCTACGCCGCGCCGCCGCCCGTCGAGCGCATCGCGCCGCTCGAGCCCGGCGGGCGCGACGGCGGCTACC
CGATGCGCGCCGGCCTGACCGATTAG

Upstream 100 bases:

>100_bases
CGGTCTGCCCCGCCGGCCGCTTCGGCCCATCCGGCTCTCGGAAGCCGGGCGGATGCGCGCGCCTGCGCGAGCCCGTCACG
AAACGCGTTTAGAATGCGGG

Downstream 100 bases:

>100_bases
CCGCGCGCCGCCCGGTGCGGCGGAGCGGCCCGGCCGCGCCGGGCGGCGGTGCGGATGCCGCGTCGCGCCGATGCGTCGGC
TTCGGCGTATTGCTTCGAGA

Product: dedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MPIHAAHAPRRASRLSAAPMPPGSAFVAFEVRFVWHFPQAVPASLGPWAVFASVLVTQLGMPVPAVPMLIVGGTMAAMGQ
ASYASMLVAAVAATVLADSMWFFAGRARGRRLLNALVRFSLSLDTTLRIARKVFEKHGAPLLVLAKFLPGLGLVSAPLLG
TTAVAVWVFLFWDVAGASLWASVWLFGGAALHDEIVRLMQWVSASGGTLFDAFAAIFVTFLLYRWAMRMRFRRWLAKIRI
SPQQLDAMLKSAAPPIVFDARPRAVREKEAYRIAGAYPLDLDSPDPLHPDLMTRPIVVYCVCPNEATAKRIVSQLQRKRI
RHALALKGGLDAWEKHGYPVEPLPADFDAARYAAPPPVERIAPLEPGGRDGGYPMRAGLTD

Sequences:

>Translated_381_residues
MPIHAAHAPRRASRLSAAPMPPGSAFVAFEVRFVWHFPQAVPASLGPWAVFASVLVTQLGMPVPAVPMLIVGGTMAAMGQ
ASYASMLVAAVAATVLADSMWFFAGRARGRRLLNALVRFSLSLDTTLRIARKVFEKHGAPLLVLAKFLPGLGLVSAPLLG
TTAVAVWVFLFWDVAGASLWASVWLFGGAALHDEIVRLMQWVSASGGTLFDAFAAIFVTFLLYRWAMRMRFRRWLAKIRI
SPQQLDAMLKSAAPPIVFDARPRAVREKEAYRIAGAYPLDLDSPDPLHPDLMTRPIVVYCVCPNEATAKRIVSQLQRKRI
RHALALKGGLDAWEKHGYPVEPLPADFDAARYAAPPPVERIAPLEPGGRDGGYPMRAGLTD
>Mature_380_residues
PIHAAHAPRRASRLSAAPMPPGSAFVAFEVRFVWHFPQAVPASLGPWAVFASVLVTQLGMPVPAVPMLIVGGTMAAMGQA
SYASMLVAAVAATVLADSMWFFAGRARGRRLLNALVRFSLSLDTTLRIARKVFEKHGAPLLVLAKFLPGLGLVSAPLLGT
TAVAVWVFLFWDVAGASLWASVWLFGGAALHDEIVRLMQWVSASGGTLFDAFAAIFVTFLLYRWAMRMRFRRWLAKIRIS
PQQLDAMLKSAAPPIVFDARPRAVREKEAYRIAGAYPLDLDSPDPLHPDLMTRPIVVYCVCPNEATAKRIVSQLQRKRIR
HALALKGGLDAWEKHGYPVEPLPADFDAARYAAPPPVERIAPLEPGGRDGGYPMRAGLTD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 41536; Mature: 41405

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIHAAHAPRRASRLSAAPMPPGSAFVAFEVRFVWHFPQAVPASLGPWAVFASVLVTQLG
CCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
MPVPAVPMLIVGGTMAAMGQASYASMLVAAVAATVLADSMWFFAGRARGRRLLNALVRFS
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLDTTLRIARKVFEKHGAPLLVLAKFLPGLGLVSAPLLGTTAVAVWVFLFWDVAGASLW
HCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASVWLFGGAALHDEIVRLMQWVSASGGTLFDAFAAIFVTFLLYRWAMRMRFRRWLAKIRI
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPQQLDAMLKSAAPPIVFDARPRAVREKEAYRIAGAYPLDLDSPDPLHPDLMTRPIVVYC
CHHHHHHHHHHCCCCEEECCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEE
VCPNEATAKRIVSQLQRKRIRHALALKGGLDAWEKHGYPVEPLPADFDAARYAAPPPVER
ECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
IAPLEPGGRDGGYPMRAGLTD
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIHAAHAPRRASRLSAAPMPPGSAFVAFEVRFVWHFPQAVPASLGPWAVFASVLVTQLG
CCCCCCCCHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
MPVPAVPMLIVGGTMAAMGQASYASMLVAAVAATVLADSMWFFAGRARGRRLLNALVRFS
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLDTTLRIARKVFEKHGAPLLVLAKFLPGLGLVSAPLLGTTAVAVWVFLFWDVAGASLW
HCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASVWLFGGAALHDEIVRLMQWVSASGGTLFDAFAAIFVTFLLYRWAMRMRFRRWLAKIRI
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPQQLDAMLKSAAPPIVFDARPRAVREKEAYRIAGAYPLDLDSPDPLHPDLMTRPIVVYC
CHHHHHHHHHHCCCCEEECCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEE
VCPNEATAKRIVSQLQRKRIRHALALKGGLDAWEKHGYPVEPLPADFDAARYAAPPPVER
ECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
IAPLEPGGRDGGYPMRAGLTD
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]