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The map label for this gene is cyc1 [H]

Identifier: 126445831

GI number: 126445831

Start: 1519165

End: 1520025

Strand: Direct

Name: cyc1 [H]

Synonym: BMA10247_A1580

Alternate gene names: 126445831

Gene position: 1519165-1520025 (Clockwise)

Preceding gene: 126447104

Following gene: 126446427

Centisome position: 64.57

GC content: 71.89

Gene sequence:

>861_bases
GTGCGGCGCAGGATCGACGACCATCTTCGCATGGACGCGGCGCGTTCGAACGCTGCATCGCCGCACGCCCGCCGAAGGAG
GCCGCCATGCCCGCCACGCCCGCGCCGATGCCGCCGGCTCGTCGGCGAAGCGTGCCGCATTGCCTCGATCGAACGTTCGT
TTGAGCGCCGTTTCGATCCGCACCGGCGCGCGCTGCACGCGCATTGCGTCCGATGGATCGGCGAGCAGTCGCTCGCGCCC
GCCGGATCGCCGCCGGCCGACTTGCGCGCGCTCCGCTATCCGGACCTCGTCGCCGGCTATTACGTCGGCGCGCCGCCGGC
CGTGCTCGAAGCGATCGCCGGTCTGTCGGTCTGGTTCTTCGTCTGGGACGACCGGCACGACGAGGACGCGCGGCGGTTGC
GCCGCGCCGCGTGGGCGCGCCTGCGCGACGCGCTGTGCGCGGTGCTCGCTTCGCCGCGTGCGCGCGTCGCCGACGCGGAG
CCGATCGTCGGCGCGCTGTCCGATTGCATCGTGCTGGGGATCCGCGCGCGGCTTGGCGACGCCTGGAACCGGCGCTTCAC
CGGCCATCTGCGGCAGATGATCGACGCCTACGACGACGAATTCCGCGCGCGCCTGGCGGCGCGCATCCCGACGCGCGACG
CGTACATGCGGTTACGCGAACGCACGTTCGGCTGTGAAGCCCGGCTCGACTGCCTCGAACTCGCGGCCGGCCGCGCGCTA
CCCGACGCGGTGCGCGCCGCGCCGCCGTATCGGCTCGCCGGTCCCGCGCGTCGCAGCAATTCGCCGCGCTTTACAACGAT
CTCTGTTCGCTGCGCAAGGAGCGCGAAGCCGAAGAAATCCACCATCTCGGCATTTCGTTGA

Upstream 100 bases:

>100_bases
CGCGAGGCGTGATCCGCGAGCCGCCGGCGCACCCGCCCGTGCGCGGCGCGACGCCTGCCGGGGAGCGCCGCGTGCGTCGC
GGGGCATTCGATCGATAGCC

Downstream 100 bases:

>100_bases
TGCATCACGAGCGGATCTCGCTGCGGGCCGCGATGCGCGAGATGCGCGCGCTGGCGAGCGCGCAGGTCGAGCGCTTCCCG
GCCGGCCAGGCCGAGCCGCT

Product: putative terpene cyclase

Products: NA

Alternate protein names: EIZS; Sesquiterpene cyclase; Sesquiterpene synthase [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRRRIDDHLRMDAARSNAASPHARRRRPPCPPRPRRCRRLVGEACRIASIERSFERRFDPHRRALHAHCVRWIGEQSLAP
AGSPPADLRALRYPDLVAGYYVGAPPAVLEAIAGLSVWFFVWDDRHDEDARRLRRAAWARLRDALCAVLASPRARVADAE
PIVGALSDCIVLGIRARLGDAWNRRFTGHLRQMIDAYDDEFRARLAARIPTRDAYMRLRERTFGCEARLDCLELAAGRAL
PDAVRAAPPYRLAGPARRSNSPRFTTISVRCARSAKPKKSTISAFR

Sequences:

>Translated_286_residues
MRRRIDDHLRMDAARSNAASPHARRRRPPCPPRPRRCRRLVGEACRIASIERSFERRFDPHRRALHAHCVRWIGEQSLAP
AGSPPADLRALRYPDLVAGYYVGAPPAVLEAIAGLSVWFFVWDDRHDEDARRLRRAAWARLRDALCAVLASPRARVADAE
PIVGALSDCIVLGIRARLGDAWNRRFTGHLRQMIDAYDDEFRARLAARIPTRDAYMRLRERTFGCEARLDCLELAAGRAL
PDAVRAAPPYRLAGPARRSNSPRFTTISVRCARSAKPKKSTISAFR
>Mature_286_residues
MRRRIDDHLRMDAARSNAASPHARRRRPPCPPRPRRCRRLVGEACRIASIERSFERRFDPHRRALHAHCVRWIGEQSLAP
AGSPPADLRALRYPDLVAGYYVGAPPAVLEAIAGLSVWFFVWDDRHDEDARRLRRAAWARLRDALCAVLASPRARVADAE
PIVGALSDCIVLGIRARLGDAWNRRFTGHLRQMIDAYDDEFRARLAARIPTRDAYMRLRERTFGCEARLDCLELAAGRAL
PDAVRAAPPYRLAGPARRSNSPRFTTISVRCARSAKPKKSTISAFR

Specific function: Catalyzes the cyclization of farnesyl diphosphate (FPP) to the sesquiterpene epi-isozizaene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terpene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005630
- InterPro:   IPR008949 [H]

Pfam domain/function: PF03936 Terpene_synth_C [H]

EC number: =4.2.3.37 [H]

Molecular weight: Translated: 32371; Mature: 32371

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRIDDHLRMDAARSNAASPHARRRRPPCPPRPRRCRRLVGEACRIASIERSFERRFDP
CCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
HRRALHAHCVRWIGEQSLAPAGSPPADLRALRYPDLVAGYYVGAPPAVLEAIAGLSVWFF
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHEEEEE
VWDDRHDEDARRLRRAAWARLRDALCAVLASPRARVADAEPIVGALSDCIVLGIRARLGD
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
AWNRRFTGHLRQMIDAYDDEFRARLAARIPTRDAYMRLRERTFGCEARLDCLELAAGRAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
PDAVRAAPPYRLAGPARRSNSPRFTTISVRCARSAKPKKSTISAFR
CHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCC
>Mature Secondary Structure
MRRRIDDHLRMDAARSNAASPHARRRRPPCPPRPRRCRRLVGEACRIASIERSFERRFDP
CCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
HRRALHAHCVRWIGEQSLAPAGSPPADLRALRYPDLVAGYYVGAPPAVLEAIAGLSVWFF
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHEEEEE
VWDDRHDEDARRLRRAAWARLRDALCAVLASPRARVADAEPIVGALSDCIVLGIRARLGD
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
AWNRRFTGHLRQMIDAYDDEFRARLAARIPTRDAYMRLRERTFGCEARLDCLELAAGRAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
PDAVRAAPPYRLAGPARRSNSPRFTTISVRCARSAKPKKSTISAFR
CHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]