| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126445775
Identifier: 126445775
GI number: 126445775
Start: 753612
End: 754676
Strand: Reverse
Name: 126445775
Synonym: BMA10247_A0818
Alternate gene names: NA
Gene position: 754676-753612 (Counterclockwise)
Preceding gene: 126446764
Following gene: 126446229
Centisome position: 32.08
GC content: 73.43
Gene sequence:
>1065_bases TTGGTCTCGGTCATCGCCAAATCCGATAGAGGACAGAACGCTCTATTATCGACAATCCGGCGCGCGATTGCGCGCGAGCC GCCGTGCCCGCTTCGGCAGCGGTACACGCGCGGCGCGCGCGAGCCGCCGTGCGCCGACGCACGACATCCGGAACACGGCG GCAAGCGCTCGCTTCGCGATCGCGGCCCGCCGCCGCCCGCATGCCCCATTCACGTCTTCCCGCCCGCCTCGATGGAACAA CGGTTCGTCCTGCTCGTATTGCTCTGCGCGCTGCTGCACGCGGTATGGAACGCGCTGCTGCACGCGAGCGAGGACCGCGT CGCGCAGCTCGGCACGATGTCGGTTCCGTATCTGCTCGCCGGCGCGGCCGGCGCGCTCGCGCTGCCGCCGCCGCCCGCGC CCGCGTGGCCGTACGTCGCGGCATCCGCGCTCCTCGAGCTCGGCTACTGCGCGGCGCTGCTGCGCGCGTACCGCAGCGGC GATTTCAGCCGGATCTATCCGATCGCGCGCGGGCTGTCGCCGCTCGCCGTCTGCGCGCTCGCGCTGATCGCGCTCGGCGA GCGGCCGACGCCGTTCGCGCTCGCCGGCATCGCGCTCGTGTCGCTCGGGATCGCGTCGCTCGCGCTCAGGCGCGGCCTGC GGTGGTCCGGCGAAAGCGTGCCCTACGCGCTCGTCACGGGCCTGTTCATCGCCGCGTACTCGGTCGTCGACGGCCGTGGC GTGCGGCTCGCCGGCGATCCGCTCGCGTACGTCGCATGGGTGTACCTGCTATGGAACGCGCCGCAGTTCGCGCTGATCTG CCGGCTGCGCGGCTGGCGCGCGCTTGCGCGCTCGCGCGCCGCCGTCTCGCGCGGGCTCGCGGCCGGCGTGCTATCGCTCG CCGCGTACGCGATCGCGATCGCCGCGTACCGGCATCTGCCGGTCGCCACCGTGTCCGCGCTGCGCGAGACGAGCTCGATC TTCGCCATCGCGATCGGCTGGTTCGCGCTGCGCGAGCGGCCGAGCGCGCGCCGGCTCGCCGCGTGCGCGCTCGTCGTCGC GGGCGCGATGCTGATCCGGATGTGA
Upstream 100 bases:
>100_bases GCGCCGGAGCAGCTCCGACAGCACGCCGGGCGCGATCTTGCAGCCGCAGCCGCCGCCGTGCGACAGGCTCGTGAGGCGCG GCGCCGCCGCGTCGGTTTGC
Downstream 100 bases:
>100_bases CGCGGCGCGGCGGCGCGCGGGCGGCACGTCGGAACTCGTGCCGGATGCCCGTCTCCGCGACGATCTGCGTGCGCGTGCTC GACGGATTCGCGATGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; Drug/Metabolite Transporter Superfamily Permease; Inner Membrane Protein; Transporter DME Family DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; DMT Family Permease
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MVSVIAKSDRGQNALLSTIRRAIAREPPCPLRQRYTRGAREPPCADARHPEHGGKRSLRDRGPPPPACPIHVFPPASMEQ RFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAYRSG DFSRIYPIARGLSPLAVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRG VRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRETSSI FAIAIGWFALRERPSARRLAACALVVAGAMLIRM
Sequences:
>Translated_354_residues MVSVIAKSDRGQNALLSTIRRAIAREPPCPLRQRYTRGAREPPCADARHPEHGGKRSLRDRGPPPPACPIHVFPPASMEQ RFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAYRSG DFSRIYPIARGLSPLAVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRG VRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRETSSI FAIAIGWFALRERPSARRLAACALVVAGAMLIRM >Mature_354_residues MVSVIAKSDRGQNALLSTIRRAIAREPPCPLRQRYTRGAREPPCADARHPEHGGKRSLRDRGPPPPACPIHVFPPASMEQ RFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAYRSG DFSRIYPIARGLSPLAVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRG VRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRETSSI FAIAIGWFALRERPSARRLAACALVVAGAMLIRM
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37737; Mature: 37737
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVIAKSDRGQNALLSTIRRAIAREPPCPLRQRYTRGAREPPCADARHPEHGGKRSLRD CCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH RGPPPPACPIHVFPPASMEQRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLA CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHH GAAGALALPPPPAPAWPYVAASALLELGYCAALLRAYRSGDFSRIYPIARGLSPLAVCAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH ALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC VRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAI CEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAYRHLPVATVSALRETSSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSVIAKSDRGQNALLSTIRRAIAREPPCPLRQRYTRGAREPPCADARHPEHGGKRSLRD CCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH RGPPPPACPIHVFPPASMEQRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLA CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHH GAAGALALPPPPAPAWPYVAASALLELGYCAALLRAYRSGDFSRIYPIARGLSPLAVCAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH ALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC VRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAI CEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAYRHLPVATVSALRETSSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA