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The map label for this gene is wcaJ [H]

Identifier: 126445724

GI number: 126445724

Start: 268504

End: 269550

Strand: Direct

Name: wcaJ [H]

Synonym: BMA10247_A0307

Alternate gene names: 126445724

Gene position: 268504-269550 (Clockwise)

Preceding gene: 126447648

Following gene: 126445796

Centisome position: 11.41

GC content: 65.04

Gene sequence:

>1047_bases
ATGTTGAGCGTGCTGGCTAGGATGATCGATATCGCGATGGCAGTGGCGGGCGCCATGATCGCCGCCATGATCCATCGCGG
CGGCTTCGTGTGGCTCGACGATCTGCAGCGCACCGTCGTCGTGTTCGACTGCATGCTCGTCGTCGTGTTCTTTCCGGCGT
TCGGTATCTATCAGTCGTGGCGCGGCAAGCCGGTGTTCGGGCTCATGTGGCGCGTGTCGGTGGCGTGGCTCGTCGTCGAG
GGCGCGGGCATTCTGATGAGCTTCAGCGTCCACCACGCGGGCGAGCTGTCGCGCTTGTGGCTCGGCTACTGGGCGATGGC
TACGATCACGCTGCTCGTCGCGTCGAAGGCCTGCGTGTACGCGGTGCTGCGGCAACTGCGGCGCGGCGGCTACAACCACA
AGTCGGTCGCGATCGTCGGCCGCGCGCAGGCGAGCGCGACGAAGCGGCTCATCGCCCACATGCGGGCGCGTCCGGATGCG
GGCTTCAATCCGGTCTGCATCTACGACGAGCACGACGACGCCTCGACGGGCGAAACCGACGGCATCGCGATCGAGCGCCG
CTTCGGCCATCTCGTGCGCCGCGTGCGCAGCCGCGAGATCGGCGAGCTCTGGCTCGTGCTGCCGCTTTCCGAGGAACCGC
AGATTCACCGGATCGTCACCGAGTTCCGAAACGATTTCGTCAACATCCGGTTCGTGCCGGACGTGCGCAGCCTGTCGTTC
TTCAATCAGGAGGTCATCGAGCTGCTCGGCGTGCCCGCGATCAATCTCGCCGCTTCGCCGATCACCGATGTGCGGATCCT
GCCGAAGTTCGTGTTCGATCGGCTGTTCGCGCTCGTCGCGCTCATGGTGCTCTCGCCGGCGATGCTCGTGATCGCGACAC
TCGTGAAGCTCACGTCGCCCGGCCCGGTGTTCTTCCGGCAGAAGCGCAAGGGCATCGACGGCAACGAGTTCGAGATCTAC
AAGTTCCGCTCGATGAAGGTGCACCAGGAGATGGGGGGAAAGGTCACGCAGGCGAGGAAGAACGATTCGCGCGTGACGCC
GGTCTGA

Upstream 100 bases:

>100_bases
GAGGAATTTTCTTCCCGGTTCAATAACGGCATGCAATGTTTAAATCGGATGCACGTCGACGAGATGTGTGCGGCCGGTTT
CCGTCTCACGAGGAAGAACC

Downstream 100 bases:

>100_bases
CCTGCCCCCTACAAACAGGGCCAGCCGGAGTCTAGTAAAGTTCGTTTTCGGAGAAGAAGACGAACATGAAGAAGCGCTTT
ACGGAACAGCAAATCATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MLSVLARMIDIAMAVAGAMIAAMIHRGGFVWLDDLQRTVVVFDCMLVVVFFPAFGIYQSWRGKPVFGLMWRVSVAWLVVE
GAGILMSFSVHHAGELSRLWLGYWAMATITLLVASKACVYAVLRQLRRGGYNHKSVAIVGRAQASATKRLIAHMRARPDA
GFNPVCIYDEHDDASTGETDGIAIERRFGHLVRRVRSREIGELWLVLPLSEEPQIHRIVTEFRNDFVNIRFVPDVRSLSF
FNQEVIELLGVPAINLAASPITDVRILPKFVFDRLFALVALMVLSPAMLVIATLVKLTSPGPVFFRQKRKGIDGNEFEIY
KFRSMKVHQEMGGKVTQARKNDSRVTPV

Sequences:

>Translated_348_residues
MLSVLARMIDIAMAVAGAMIAAMIHRGGFVWLDDLQRTVVVFDCMLVVVFFPAFGIYQSWRGKPVFGLMWRVSVAWLVVE
GAGILMSFSVHHAGELSRLWLGYWAMATITLLVASKACVYAVLRQLRRGGYNHKSVAIVGRAQASATKRLIAHMRARPDA
GFNPVCIYDEHDDASTGETDGIAIERRFGHLVRRVRSREIGELWLVLPLSEEPQIHRIVTEFRNDFVNIRFVPDVRSLSF
FNQEVIELLGVPAINLAASPITDVRILPKFVFDRLFALVALMVLSPAMLVIATLVKLTSPGPVFFRQKRKGIDGNEFEIY
KFRSMKVHQEMGGKVTQARKNDSRVTPV
>Mature_348_residues
MLSVLARMIDIAMAVAGAMIAAMIHRGGFVWLDDLQRTVVVFDCMLVVVFFPAFGIYQSWRGKPVFGLMWRVSVAWLVVE
GAGILMSFSVHHAGELSRLWLGYWAMATITLLVASKACVYAVLRQLRRGGYNHKSVAIVGRAQASATKRLIAHMRARPDA
GFNPVCIYDEHDDASTGETDGIAIERRFGHLVRRVRSREIGELWLVLPLSEEPQIHRIVTEFRNDFVNIRFVPDVRSLSF
FNQEVIELLGVPAINLAASPITDVRILPKFVFDRLFALVALMVLSPAMLVIATLVKLTSPGPVFFRQKRKGIDGNEFEIY
KFRSMKVHQEMGGKVTQARKNDSRVTPV

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=356, Percent_Identity=31.1797752808989, Blast_Score=151, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 39069; Mature: 39069

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVLARMIDIAMAVAGAMIAAMIHRGGFVWLDDLQRTVVVFDCMLVVVFFPAFGIYQSW
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGKPVFGLMWRVSVAWLVVEGAGILMSFSVHHAGELSRLWLGYWAMATITLLVASKACVY
CCCCHHHHHHHHHHHHHEEECCCEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLRQLRRGGYNHKSVAIVGRAQASATKRLIAHMRARPDAGFNPVCIYDEHDDASTGETD
HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
GIAIERRFGHLVRRVRSREIGELWLVLPLSEEPQIHRIVTEFRNDFVNIRFVPDVRSLSF
CEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHH
FNQEVIELLGVPAINLAASPITDVRILPKFVFDRLFALVALMVLSPAMLVIATLVKLTSP
HHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPVFFRQKRKGIDGNEFEIYKFRSMKVHQEMGGKVTQARKNDSRVTPV
CCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MLSVLARMIDIAMAVAGAMIAAMIHRGGFVWLDDLQRTVVVFDCMLVVVFFPAFGIYQSW
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGKPVFGLMWRVSVAWLVVEGAGILMSFSVHHAGELSRLWLGYWAMATITLLVASKACVY
CCCCHHHHHHHHHHHHHEEECCCEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLRQLRRGGYNHKSVAIVGRAQASATKRLIAHMRARPDAGFNPVCIYDEHDDASTGETD
HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
GIAIERRFGHLVRRVRSREIGELWLVLPLSEEPQIHRIVTEFRNDFVNIRFVPDVRSLSF
CEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHH
FNQEVIELLGVPAINLAASPITDVRILPKFVFDRLFALVALMVLSPAMLVIATLVKLTSP
HHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPVFFRQKRKGIDGNEFEIYKFRSMKVHQEMGGKVTQARKNDSRVTPV
CCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]