| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is amn [H]
Identifier: 126445686
GI number: 126445686
Start: 297552
End: 299078
Strand: Direct
Name: amn [H]
Synonym: BMA10247_A0341
Alternate gene names: 126445686
Gene position: 297552-299078 (Clockwise)
Preceding gene: 126447875
Following gene: 126445822
Centisome position: 12.65
GC content: 66.27
Gene sequence:
>1527_bases ATGAAGAACGATCCCAACCGCCGTTCCCGGACGCGCACGCCGGGTAGCCCGTGCGTCGAAGCGTTCGACGACCCGATCGC CGCCGTCGCGCGGCTCTCCGAGATCTACGAGACGAACACCGCGTTCCTGCGCGACGCGTTCGCGCGCTATCGCGGCAACG AAGCGTTCGACGAGCACGTGCGCGCGTGCTATCCGTTCGTGCGCATCCGCACCGACGTCAACACGCACATCGATTCGCGC CGCTCGTACGGCTTCGTCGCCGGCCCGGGCGTGTTCGAGACGACCGTCACGCGCCCGGACCTGTTCGCGAACTACTACCG CGAGCAATTGCGCCTGCTCGCGAAGAACCATCACGTTCGGATCGAAGTCGGCGTATCGGCGCAGCCGATCCCGGTTCACT TCGCGTTCTCCGAAGGCATTCACCTCGAAGGCGATCTCGACCGCGACCGCTTGGTCGCGATGCGCGACGTGTTCGACACG CCGGATCTCGCGTATCTCGATGACCGGATCGTCAACGGCACGTACGAGCCCGCACCGGGCGAGCCGCATCCGCTCGCGCT CTTCACGGCCGCGCGCGTCGATTTTTCGCTGCATCGGCTGCGGCACTACACGGCGACGCTGCCGACGCATTTCCAGAACT ACGTGCTCTATACGAACTACCAGTTCTACATCGACGAATTCGTGAAGCTCGGCCGCACGATGATGTCGGCGAGCGACGAT CCCGAGGTGCGCGCATACCGCAGCGAATACACGGCGTTCGTGGAGCCGGGCGACGTGATCACGTACAACGCGAATCTCGG CGAGGACGCGAGCGAAGGCACGCCGCCGCCGCGCCTGCCGCAGATGCCCGCGTATCACCTCAAGCGCGCGGACGGCAGCG GGATCACGATGGTCAACATCGGCGTCGGGCCATCGAACGCGAAGACGATCACCGATCACATCGCGGTGCTGCGTCCGCAC GCGTGGGTGATGCTCGGCCATTGCGCGGGGCTGCGCAACACGCAGCGCCTGGGCGACTACGTGCTCGCGCACGGCTATGT CCGCGAGGATCACGTGCTCGACGCGGATCTGCCGCTGTGGGTGCCGATTCCGGCGCTCGCCGAAGTGCAGGTCGCGCTCG AGCGCGCGGTCGCGCAGGTCACGCAGCTCGAAGGCGCCGAGCTCAAGCGCGTGATGCGCACGGGCACCGTCGCGAGCGTC GACAACCGCAACTGGGAGTTGCGCGACCATCGCGAGCCGGTGCAGCGGCTGTCGCAGAGCCGCGCGATCGCGCTCGACAT GGAGAGCGCGACGATCGCCGCGAACGGCTTTCGCTTCCGCGTGCCGTACGGCACGCTGCTGTGCGTGTCGGACAAGCCGC TGCACGGCGAGCTGAAGCTGCCGGGGATGGCCGATCAGTTCTACCGCGGGCAGGTCGATCAGCATTTGCAGATCGGCGTG AAGGCGATGGAGATTCTCCGCACGAATGGGCTCGATCGGTTGCATAGTCGCAAGCTGCGCAGCTTCGCGGAAGTGGCGTT TCAGTAA
Upstream 100 bases:
>100_bases CCGTTCGACGATGCGCGAGCGGCCTTGCCGCCGCGATGGGCATCGGCTGCGCGAGCGGGTTCCGTGATAATGTCGAAACG ATCTGAAGAGGCACTGCTAG
Downstream 100 bases:
>100_bases CGAACCCTTGCTCTATAAGGCTCCCCGGCTTGTTCGAGGAGCCTTATTGTCTAACATGCGAGTCAGTGTCTGACTTGCGC GCTTCAATGGGGGCTGGCCG
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MKNDPNRRSRTRTPGSPCVEAFDDPIAAVARLSEIYETNTAFLRDAFARYRGNEAFDEHVRACYPFVRIRTDVNTHIDSR RSYGFVAGPGVFETTVTRPDLFANYYREQLRLLAKNHHVRIEVGVSAQPIPVHFAFSEGIHLEGDLDRDRLVAMRDVFDT PDLAYLDDRIVNGTYEPAPGEPHPLALFTAARVDFSLHRLRHYTATLPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDD PEVRAYRSEYTAFVEPGDVITYNANLGEDASEGTPPPRLPQMPAYHLKRADGSGITMVNIGVGPSNAKTITDHIAVLRPH AWVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDADLPLWVPIPALAEVQVALERAVAQVTQLEGAELKRVMRTGTVASV DNRNWELRDHREPVQRLSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRGQVDQHLQIGV KAMEILRTNGLDRLHSRKLRSFAEVAFQ
Sequences:
>Translated_508_residues MKNDPNRRSRTRTPGSPCVEAFDDPIAAVARLSEIYETNTAFLRDAFARYRGNEAFDEHVRACYPFVRIRTDVNTHIDSR RSYGFVAGPGVFETTVTRPDLFANYYREQLRLLAKNHHVRIEVGVSAQPIPVHFAFSEGIHLEGDLDRDRLVAMRDVFDT PDLAYLDDRIVNGTYEPAPGEPHPLALFTAARVDFSLHRLRHYTATLPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDD PEVRAYRSEYTAFVEPGDVITYNANLGEDASEGTPPPRLPQMPAYHLKRADGSGITMVNIGVGPSNAKTITDHIAVLRPH AWVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDADLPLWVPIPALAEVQVALERAVAQVTQLEGAELKRVMRTGTVASV DNRNWELRDHREPVQRLSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRGQVDQHLQIGV KAMEILRTNGLDRLHSRKLRSFAEVAFQ >Mature_508_residues MKNDPNRRSRTRTPGSPCVEAFDDPIAAVARLSEIYETNTAFLRDAFARYRGNEAFDEHVRACYPFVRIRTDVNTHIDSR RSYGFVAGPGVFETTVTRPDLFANYYREQLRLLAKNHHVRIEVGVSAQPIPVHFAFSEGIHLEGDLDRDRLVAMRDVFDT PDLAYLDDRIVNGTYEPAPGEPHPLALFTAARVDFSLHRLRHYTATLPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDD PEVRAYRSEYTAFVEPGDVITYNANLGEDASEGTPPPRLPQMPAYHLKRADGSGITMVNIGVGPSNAKTITDHIAVLRPH AWVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDADLPLWVPIPALAEVQVALERAVAQVTQLEGAELKRVMRTGTVASV DNRNWELRDHREPVQRLSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRGQVDQHLQIGV KAMEILRTNGLDRLHSRKLRSFAEVAFQ
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=491, Percent_Identity=48.6761710794297, Blast_Score=424, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 57324; Mature: 57324
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDPNRRSRTRTPGSPCVEAFDDPIAAVARLSEIYETNTAFLRDAFARYRGNEAFDEHV CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RACYPFVRIRTDVNTHIDSRRSYGFVAGPGVFETTVTRPDLFANYYREQLRLLAKNHHVR HHHCCEEEEEECCHHCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEE IEVGVSAQPIPVHFAFSEGIHLEGDLDRDRLVAMRDVFDTPDLAYLDDRIVNGTYEPAPG EEECCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC EPHPLALFTAARVDFSLHRLRHYTATLPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDD CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCC PEVRAYRSEYTAFVEPGDVITYNANLGEDASEGTPPPRLPQMPAYHLKRADGSGITMVNI CHHHHHHHHCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEE GVGPSNAKTITDHIAVLRPHAWVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDADLPLW CCCCCCCHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHCCEECCCCEECCCCCCE VPIPALAEVQVALERAVAQVTQLEGAELKRVMRTGTVASVDNRNWELRDHREPVQRLSQS ECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCC RAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRGQVDQHLQIGV CEEEEEECCCEEEECCEEEECCCCEEEEECCCCCCCCEECCCCHHHHHHCCCCHHHHHHH KAMEILRTNGLDRLHSRKLRSFAEVAFQ HHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNDPNRRSRTRTPGSPCVEAFDDPIAAVARLSEIYETNTAFLRDAFARYRGNEAFDEHV CCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RACYPFVRIRTDVNTHIDSRRSYGFVAGPGVFETTVTRPDLFANYYREQLRLLAKNHHVR HHHCCEEEEEECCHHCCCCCCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEE IEVGVSAQPIPVHFAFSEGIHLEGDLDRDRLVAMRDVFDTPDLAYLDDRIVNGTYEPAPG EEECCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC EPHPLALFTAARVDFSLHRLRHYTATLPTHFQNYVLYTNYQFYIDEFVKLGRTMMSASDD CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCC PEVRAYRSEYTAFVEPGDVITYNANLGEDASEGTPPPRLPQMPAYHLKRADGSGITMVNI CHHHHHHHHCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEE GVGPSNAKTITDHIAVLRPHAWVMLGHCAGLRNTQRLGDYVLAHGYVREDHVLDADLPLW CCCCCCCHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHCCEECCCCEECCCCCCE VPIPALAEVQVALERAVAQVTQLEGAELKRVMRTGTVASVDNRNWELRDHREPVQRLSQS ECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCC RAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMADQFYRGQVDQHLQIGV CEEEEEECCCEEEECCEEEECCCCEEEEECCCCCCCCEECCCCHHHHHHCCCCHHHHHHH KAMEILRTNGLDRLHSRKLRSFAEVAFQ HHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]