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The map label for this gene is 126445682

Identifier: 126445682

GI number: 126445682

Start: 503102

End: 504256

Strand: Reverse

Name: 126445682

Synonym: BMA10247_A0554

Alternate gene names: NA

Gene position: 504256-503102 (Counterclockwise)

Preceding gene: 126446954

Following gene: 126446243

Centisome position: 21.43

GC content: 65.71

Gene sequence:

>1155_bases
ATGAAGAAACTCGCTCTGTCTACCCTCTCGCTCGCGCTGCTGGGCGCAGCCGGTGCAGCTCAGGCTCAAAGCAGCGTCAC
GCTGTACGGCGTGATTGATACGTCGATCACTTATGTCCACGGCAACGACGGCAAGGCCAACAACGCCTGGCTGATGGGCA
GCGGCAACCTGCAAGGCAGCCGCTGGGGCCTGAAGGGCACCGAGGATCTCGGCGCCGGCCTGAAGGCGATCTTCCAGTTG
GAAAATGGCTTCAACTCGAACGACGGCACGCTCGGCCAAGGCAAGCGCATGTTCGGCCGCCAGGCGTTCGTCGGTCTGCA
GCATGACCAGTACGGCACGCTGACGCTCGGCCGTCAGTACGATCCGCTCGTCGACCTCGTGCAACCGGTGACGGCCGACA
ACTACTTCGGCAGCCTGTTCGCCACCCCGGGTGACGTCGACAACAACGACAACAGCCTGCGCGTGAACAACACGGTCAAG
TACACGTCGCCCGTGTTCGCCGGCTTCCAGTTCGAAGCCCTGTACGGCTTCAGCGGCATCGCGGGCTCGCCGGGCCAAGG
CCAGACGTGGTCGGCCGCCGCCGCATACAACAACGGCCCGATCGGCGTCGCGGCCGGCTACTTCTACACGTCGAACCCGT
CGCCGACGGCCGGCTCGCGCTCGACGTGGAGCGGCTCGTCCGACGCGATCTTCGACGGCGCGATCAACAGCGGCTACACG
AGCGCGAAGTCGATCGGCATCGCACAGGTGGCCGGCCAGTACGTGTTCGGCCCGGTCACGGTCGGCCTCGGCTACAGCAA
CGCGCAATACAAGCCGGACGGCTTCTCGGGCTTCTCGTCGACCGAGAAGTACAACACGGGCCGCGGCTTCGTGAGGTACC
AGGCCACGCCGGCGCTGCTGCTCGGCCTCGGCTACGCATACACGAAGGCGAGCGGCGACACGGACGCGAAGTACCACCAA
GTGTCGATCGGCGCGGACTACGCGCTGTCCAAGCGCACGGACGTCTACCTCGCCGGTGCGTACCAGCACGCGAGCGGCAC
GCAGCGCGTCGACGCGACGACGACGCAAACGGCGCAGGCATCGATCGGCTCGTACGGCGTGAACGGTACGAAGTCGCAAG
AGATGGTGGCTCTGGGCCTGCGCCACAAGTTCTAA

Upstream 100 bases:

>100_bases
TTTGAGACACTTTATTTTTTTGGATTTCTTGCGTCTGGTGCAGTGCGCTATTCTCCAATCCGCAACAAATAACGAATCAC
TCGCGTGGAGAAATAACTCG

Downstream 100 bases:

>100_bases
GCGCAGCCGCGACGCGCGGTGCGGCGGCGTCTCCCGACGCCGCAAGCCGCAGTTGCCAAGCCAGCCTGACGCGTATGCGG
ACGGCTGGCTTTTTTCATTG

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKKLALSTLSLALLGAAGAAQAQSSVTLYGVIDTSITYVHGNDGKANNAWLMGSGNLQGSRWGLKGTEDLGAGLKAIFQL
ENGFNSNDGTLGQGKRMFGRQAFVGLQHDQYGTLTLGRQYDPLVDLVQPVTADNYFGSLFATPGDVDNNDNSLRVNNTVK
YTSPVFAGFQFEALYGFSGIAGSPGQGQTWSAAAAYNNGPIGVAAGYFYTSNPSPTAGSRSTWSGSSDAIFDGAINSGYT
SAKSIGIAQVAGQYVFGPVTVGLGYSNAQYKPDGFSGFSSTEKYNTGRGFVRYQATPALLLGLGYAYTKASGDTDAKYHQ
VSIGADYALSKRTDVYLAGAYQHASGTQRVDATTTQTAQASIGSYGVNGTKSQEMVALGLRHKF

Sequences:

>Translated_384_residues
MKKLALSTLSLALLGAAGAAQAQSSVTLYGVIDTSITYVHGNDGKANNAWLMGSGNLQGSRWGLKGTEDLGAGLKAIFQL
ENGFNSNDGTLGQGKRMFGRQAFVGLQHDQYGTLTLGRQYDPLVDLVQPVTADNYFGSLFATPGDVDNNDNSLRVNNTVK
YTSPVFAGFQFEALYGFSGIAGSPGQGQTWSAAAAYNNGPIGVAAGYFYTSNPSPTAGSRSTWSGSSDAIFDGAINSGYT
SAKSIGIAQVAGQYVFGPVTVGLGYSNAQYKPDGFSGFSSTEKYNTGRGFVRYQATPALLLGLGYAYTKASGDTDAKYHQ
VSIGADYALSKRTDVYLAGAYQHASGTQRVDATTTQTAQASIGSYGVNGTKSQEMVALGLRHKF
>Mature_384_residues
MKKLALSTLSLALLGAAGAAQAQSSVTLYGVIDTSITYVHGNDGKANNAWLMGSGNLQGSRWGLKGTEDLGAGLKAIFQL
ENGFNSNDGTLGQGKRMFGRQAFVGLQHDQYGTLTLGRQYDPLVDLVQPVTADNYFGSLFATPGDVDNNDNSLRVNNTVK
YTSPVFAGFQFEALYGFSGIAGSPGQGQTWSAAAAYNNGPIGVAAGYFYTSNPSPTAGSRSTWSGSSDAIFDGAINSGYT
SAKSIGIAQVAGQYVFGPVTVGLGYSNAQYKPDGFSGFSSTEKYNTGRGFVRYQATPALLLGLGYAYTKASGDTDAKYHQ
VSIGADYALSKRTDVYLAGAYQHASGTQRVDATTTQTAQASIGSYGVNGTKSQEMVALGLRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40222; Mature: 40222

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLALSTLSLALLGAAGAAQAQSSVTLYGVIDTSITYVHGNDGKANNAWLMGSGNLQGS
CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECEEEEEECCCCCCCCEEEEECCCCCCC
RWGLKGTEDLGAGLKAIFQLENGFNSNDGTLGQGKRMFGRQAFVGLQHDQYGTLTLGRQY
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHEEEECCCCCCEEEECCCC
DPLVDLVQPVTADNYFGSLFATPGDVDNNDNSLRVNNTVKYTSPVFAGFQFEALYGFSGI
CHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEECCEEEECCCEECCEEEEEEECCCCC
AGSPGQGQTWSAAAAYNNGPIGVAAGYFYTSNPSPTAGSRSTWSGSSDAIFDGAINSGYT
CCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
SAKSIGIAQVAGQYVFGPVTVGLGYSNAQYKPDGFSGFSSTEKYNTGRGFVRYQATPALL
CHHHCCHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEE
LGLGYAYTKASGDTDAKYHQVSIGADYALSKRTDVYLAGAYQHASGTQRVDATTTQTAQA
ECCCHHEEECCCCCCCEEEEEEECCCEEECCCCEEEEEEEEECCCCCCEECCCCCHHHHH
SIGSYGVNGTKSQEMVALGLRHKF
HCCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MKKLALSTLSLALLGAAGAAQAQSSVTLYGVIDTSITYVHGNDGKANNAWLMGSGNLQGS
CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECEEEEEECCCCCCCCEEEEECCCCCCC
RWGLKGTEDLGAGLKAIFQLENGFNSNDGTLGQGKRMFGRQAFVGLQHDQYGTLTLGRQY
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHEEEECCCCCCEEEECCCC
DPLVDLVQPVTADNYFGSLFATPGDVDNNDNSLRVNNTVKYTSPVFAGFQFEALYGFSGI
CHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEECCEEEECCCEECCEEEEEEECCCCC
AGSPGQGQTWSAAAAYNNGPIGVAAGYFYTSNPSPTAGSRSTWSGSSDAIFDGAINSGYT
CCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
SAKSIGIAQVAGQYVFGPVTVGLGYSNAQYKPDGFSGFSSTEKYNTGRGFVRYQATPALL
CHHHCCHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEE
LGLGYAYTKASGDTDAKYHQVSIGADYALSKRTDVYLAGAYQHASGTQRVDATTTQTAQA
ECCCHHEEECCCCCCCEEEEEEECCCEEECCCCEEEEEEEEECCCCCCEECCCCCHHHHH
SIGSYGVNGTKSQEMVALGLRHKF
HCCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]