Click here to switch to the map view.

The map label for this gene is gsiC [H]

Identifier: 126445672

GI number: 126445672

Start: 1324246

End: 1325166

Strand: Reverse

Name: gsiC [H]

Synonym: BMA10247_A1357

Alternate gene names: 126445672

Gene position: 1325166-1324246 (Counterclockwise)

Preceding gene: 126447251

Following gene: 126446182

Centisome position: 56.33

GC content: 68.08

Gene sequence:

>921_bases
ATGCTGAATTTTCTGGTCAAACGACTGTTCGGGCTGCTGCCGACGCTCGCGTGCGTCGCGGTGCTGGTGTTCCTGTTCGT
CCACCTGCTGCCGGGCGATCCCGCGCGGCTCGCGGCCGGCCCCGAGGCCGACGACGCGACCGTCGCGCTCGTGCGCGCCG
ATCTCGGCCTCGACAAGCCGCTGCCGGCGCAGTTCGCGAGCTTCTTCGCGCGGATCGCGCACGGCGACTTCGGCGTCTCG
ACGCGCAGCAAGCGGCCCGTAGCGACCGAGATCGGCGAGCGCTTCATGCCGACGCTGACGCTGACCGTCGTCAGCATGGC
CTGGGCGACGCTCTTCGGCATGGCGATCGGCATCGCGTCGGCCGTGTGGCGCAACCGCTGGCCGGACCGCATCGGCATGA
CGCTCGCGGTGTCGGGCATCTCGTTTCCGGCGTTCGCGCTCGGCATGCTGCTGATGGAGGTGTTCTCGGTGAAGCTCGGC
TGGCTGCCCGTCGTGCCGGACGGCTCGTGGAAGAGCTACGTGCTGCCGTCGGTGACGCTCGGCGCGGCCGTGGCCGCCGT
GATGGCGCGCTTCACGCGCGCGTCGTTCGTCGAGGTGCTGAACAAGGATTTCGTGCGCACCGCGCGCGCGAAGGGCGTGC
GCGAGCCGATGGTCGTGCTCAAGCACTGCCTGCGCAACGCGATGATTCCGGTCGTCACGATGATGGGGCTGCAGTTCGGC
TTCCTGCTCGGCGGCTCGATCGTCGTCGAGGCGGTGTTCAACTGGCCGGGGCTCGGGCGCCTGCTCGTCGATGCGGTGAC
GATGCGCGACTACCCGGTGATCCAGGCGATCGTGCTGCTGTTCTCGCTGGAGTTCATCCTGATCAACCTGAGCGTCGACG
TGCTGTACGCGGTCATCAACCCGACGATCCGTTTCAAGTGA

Upstream 100 bases:

>100_bases
ATCGTCGCGATTTCGCCCGCCCGGGCGCGCGCGGCGCGTCGCGCGCATCGGATACCGGCGGCGCGCGGCTTCTTCGCGCG
CCGCATCGAGAGGCAAGCGC

Downstream 100 bases:

>100_bases
GGCGCGCATGAACGCGACTGTTTCCTCCCCCCCTTCCGCACCCGCTTCGGCCGGCGCGCCAGCCGCGATCCGCACGCCGT
GGAGCGAGTTCTGGCGCAAG

Product: putative glutathione ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLNFLVKRLFGLLPTLACVAVLVFLFVHLLPGDPARLAAGPEADDATVALVRADLGLDKPLPAQFASFFARIAHGDFGVS
TRSKRPVATEIGERFMPTLTLTVVSMAWATLFGMAIGIASAVWRNRWPDRIGMTLAVSGISFPAFALGMLLMEVFSVKLG
WLPVVPDGSWKSYVLPSVTLGAAVAAVMARFTRASFVEVLNKDFVRTARAKGVREPMVVLKHCLRNAMIPVVTMMGLQFG
FLLGGSIVVEAVFNWPGLGRLLVDAVTMRDYPVIQAIVLLFSLEFILINLSVDVLYAVINPTIRFK

Sequences:

>Translated_306_residues
MLNFLVKRLFGLLPTLACVAVLVFLFVHLLPGDPARLAAGPEADDATVALVRADLGLDKPLPAQFASFFARIAHGDFGVS
TRSKRPVATEIGERFMPTLTLTVVSMAWATLFGMAIGIASAVWRNRWPDRIGMTLAVSGISFPAFALGMLLMEVFSVKLG
WLPVVPDGSWKSYVLPSVTLGAAVAAVMARFTRASFVEVLNKDFVRTARAKGVREPMVVLKHCLRNAMIPVVTMMGLQFG
FLLGGSIVVEAVFNWPGLGRLLVDAVTMRDYPVIQAIVLLFSLEFILINLSVDVLYAVINPTIRFK
>Mature_306_residues
MLNFLVKRLFGLLPTLACVAVLVFLFVHLLPGDPARLAAGPEADDATVALVRADLGLDKPLPAQFASFFARIAHGDFGVS
TRSKRPVATEIGERFMPTLTLTVVSMAWATLFGMAIGIASAVWRNRWPDRIGMTLAVSGISFPAFALGMLLMEVFSVKLG
WLPVVPDGSWKSYVLPSVTLGAAVAAVMARFTRASFVEVLNKDFVRTARAKGVREPMVVLKHCLRNAMIPVVTMMGLQFG
FLLGGSIVVEAVFNWPGLGRLLVDAVTMRDYPVIQAIVLLFSLEFILINLSVDVLYAVINPTIRFK

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=74.8366013071895, Blast_Score=466, Evalue=1e-133,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=41.4201183431953, Blast_Score=246, Evalue=1e-66,
Organism=Escherichia coli, GI1789888, Length=308, Percent_Identity=37.3376623376623, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=37.8378378378378, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI1787497, Length=313, Percent_Identity=35.4632587859425, Blast_Score=184, Evalue=6e-48,
Organism=Escherichia coli, GI1787550, Length=265, Percent_Identity=31.3207547169811, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1788504, Length=360, Percent_Identity=26.3888888888889, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33308; Mature: 33308

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFLVKRLFGLLPTLACVAVLVFLFVHLLPGDPARLAAGPEADDATVALVRADLGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHEEEEEHHCCCCCC
LPAQFASFFARIAHGDFGVSTRSKRPVATEIGERFMPTLTLTVVSMAWATLFGMAIGIAS
CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWRNRWPDRIGMTLAVSGISFPAFALGMLLMEVFSVKLGWLPVVPDGSWKSYVLPSVTL
HHHHCCCCCHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHH
GAAVAAVMARFTRASFVEVLNKDFVRTARAKGVREPMVVLKHCLRNAMIPVVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSIVVEAVFNWPGLGRLLVDAVTMRDYPVIQAIVLLFSLEFILINLSVDVLYAVIN
HHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTIRFK
CCCCCC
>Mature Secondary Structure
MLNFLVKRLFGLLPTLACVAVLVFLFVHLLPGDPARLAAGPEADDATVALVRADLGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHEEEEEHHCCCCCC
LPAQFASFFARIAHGDFGVSTRSKRPVATEIGERFMPTLTLTVVSMAWATLFGMAIGIAS
CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWRNRWPDRIGMTLAVSGISFPAFALGMLLMEVFSVKLGWLPVVPDGSWKSYVLPSVTL
HHHHCCCCCHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHH
GAAVAAVMARFTRASFVEVLNKDFVRTARAKGVREPMVVLKHCLRNAMIPVVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSIVVEAVFNWPGLGRLLVDAVTMRDYPVIQAIVLLFSLEFILINLSVDVLYAVIN
HHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTIRFK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA