| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126445635
Identifier: 126445635
GI number: 126445635
Start: 2349432
End: 2350808
Strand: Reverse
Name: 126445635
Synonym: BMA10247_A2412
Alternate gene names: NA
Gene position: 2350808-2349432 (Counterclockwise)
Preceding gene: NA
Following gene: 126445928
Centisome position: 99.92
GC content: 62.75
Gene sequence:
>1377_bases ATGGCCACAAAGCGCGCCAAGAAAACCGATGTGGACGTGGTGAGTGCTAGTTCCGCCGAATTGCGTAAGGCCGTCGAGGC GATCGCAATTCAGCCGAAAAACGGCAAGATCACCCTCCTGACTCGCAAGCTGTTCAACGTGCTGCTTGCGGTCGCCCAAC AAGCGGACGATTCCGGCGACACCTATCGCGCGCTGTTGTCGGACATCGTCGCGAACTCGGCTTTCGATTCCAATGACACC GCCCTCGTCAAGGAGCACTTGCGGCGAATGGTGTCGGTGCAGGTCGAATGGAGTACCGGCACGTCGAGCCAGAAGCCCGG CCGAAAGTGGGGAATCTCCACGTTGATCGCCGATGCCGAAATTCTCGAAGATCCGGCCACACGGCGTGTGTGGGTCGAAT TCTCGTTTGCGCCGAAGATCAAGAAGAAACTGCTCGACCCGGTGCAGTACGCGCGTCTGAGCCTGCAGTTCCAGAGCCAG CTGCGCAGCAGCGCGGGGCTCGCGCTTTACGAAATCTGCGTGCGCTACCTGACGAATCCGAGCCATCTGACGATGCGTGA GCCATGGGAATGGTGGCGCCCGATTCTCTCCGGCACCCCCGATACCGAAGCCGGCGACGAGGCGAAGCGCGAGTACAAGT ACTTCAAGCGCGATTACTTGCGTCCGGCGATCGCCGAGGTGAACGCGGTGACGAACATCTTCGTCGAACTGGTTGAGCAT CGCGAAGGACGGCGGGTGGCCGAGATTCAGTTCCGCGTGTCGGAGCGCAAGCAGCCGATGCTCGCGCTCGACGAGCATCC GAACGTGTTCGACAGCACGCTTGTCGACCGGATGGTGAAGATCGGCATCCCGCTGAAGGAAGCGCAGACGCTTTACGCGG ACAACGAGGAAAACCGGATTCGCGCGGCACTCCAGTTGACCGAGCAGCGGGTACGCAGCACGACGCTGCCGCCCGTGCGC AGCGCGCCTGCGTTGTTCAAGGATGCGCTGAAGAAAGGATATGCGCCGCCCGTCGATACGGTCGAAGCGCCGCCGCTCGG CGGTAGCGCCAAGTTGGCTGCCGCCGCGGCGAACGTGGGGCAGGCGGACGACCCGAAGGCACGTCTGCGCAGCGAATACG ATGCCTACCGGCGCAAGGAAGCCAAACAGCTGTACGAGGAACAGGGTGACGCGGAGCGTGAGGTTGCGCGCGCGTCGTTC GAATCCGATGTGCTGCCGGCGTTGGGCTCGCATTTGCGTGACGATTGGCGGCGACGCGGGCTCGACTCGAAGCTCGTCGA AACGGCCTTCTTCGATTGGCTCGCGCAACGGACTTGGGGCGAACCGACCGACGGCGATCTGCTCGCCTTCACGCTCAGCC AGTCTCGCGCGGCTTGA
Upstream 100 bases:
>100_bases GACAAATCGCTGAGCTTCACCGCATATGGTGAGCATGCCGTTCTGGACGCACATCACCACAGAGGCTATCCTTCCGGAAA CTTCTCCTCCGACCCGACGC
Downstream 100 bases:
>100_bases GGTGGGCCCGGTTCACCGGATATTTTCGTCTTTCGCACGCGCAAGAAGAAACGGGGCCCGCTGGGCCCCGTTCAGATTGC TGACAAACCCTCGCCAAGTG
Product: putative replication protein
Products: NA
Alternate protein names: Replication Protein; Plasmid Replication Protein; Plasmid Replication Initiation Protein
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MATKRAKKTDVDVVSASSAELRKAVEAIAIQPKNGKITLLTRKLFNVLLAVAQQADDSGDTYRALLSDIVANSAFDSNDT ALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAEILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQ LRSSAGLALYEICVRYLTNPSHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELVEH REGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADNEENRIRAALQLTEQRVRSTTLPPVR SAPALFKDALKKGYAPPVDTVEAPPLGGSAKLAAAAANVGQADDPKARLRSEYDAYRRKEAKQLYEEQGDAEREVARASF ESDVLPALGSHLRDDWRRRGLDSKLVETAFFDWLAQRTWGEPTDGDLLAFTLSQSRAA
Sequences:
>Translated_458_residues MATKRAKKTDVDVVSASSAELRKAVEAIAIQPKNGKITLLTRKLFNVLLAVAQQADDSGDTYRALLSDIVANSAFDSNDT ALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAEILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQ LRSSAGLALYEICVRYLTNPSHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELVEH REGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADNEENRIRAALQLTEQRVRSTTLPPVR SAPALFKDALKKGYAPPVDTVEAPPLGGSAKLAAAAANVGQADDPKARLRSEYDAYRRKEAKQLYEEQGDAEREVARASF ESDVLPALGSHLRDDWRRRGLDSKLVETAFFDWLAQRTWGEPTDGDLLAFTLSQSRAA >Mature_457_residues ATKRAKKTDVDVVSASSAELRKAVEAIAIQPKNGKITLLTRKLFNVLLAVAQQADDSGDTYRALLSDIVANSAFDSNDTA LVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAEILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQL RSSAGLALYEICVRYLTNPSHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELVEHR EGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADNEENRIRAALQLTEQRVRSTTLPPVRS APALFKDALKKGYAPPVDTVEAPPLGGSAKLAAAAANVGQADDPKARLRSEYDAYRRKEAKQLYEEQGDAEREVARASFE SDVLPALGSHLRDDWRRRGLDSKLVETAFFDWLAQRTWGEPTDGDLLAFTLSQSRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51468; Mature: 51337
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKRAKKTDVDVVSASSAELRKAVEAIAIQPKNGKITLLTRKLFNVLLAVAQQADDSGD CCCCCCCCCCCHHCCCCHHHHHHHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCH TYRALLSDIVANSAFDSNDTALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAE HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHH ILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQLRSSAGLALYEICVRYLTNP HHCCCCCCEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC SHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELVEH CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH REGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADNEENRI HCCCEEEHHHEEHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH RAALQLTEQRVRSTTLPPVRSAPALFKDALKKGYAPPVDTVEAPPLGGSAKLAAAAANVG HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC QADDPKARLRSEYDAYRRKEAKQLYEEQGDAEREVARASFESDVLPALGSHLRDDWRRRG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDSKLVETAFFDWLAQRTWGEPTDGDLLAFTLSQSRAA CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure ATKRAKKTDVDVVSASSAELRKAVEAIAIQPKNGKITLLTRKLFNVLLAVAQQADDSGD CCCCCCCCCCHHCCCCHHHHHHHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCH TYRALLSDIVANSAFDSNDTALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAE HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHH ILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQLRSSAGLALYEICVRYLTNP HHCCCCCCEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC SHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELVEH CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH REGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADNEENRI HCCCEEEHHHEEHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH RAALQLTEQRVRSTTLPPVRSAPALFKDALKKGYAPPVDTVEAPPLGGSAKLAAAAANVG HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC QADDPKARLRSEYDAYRRKEAKQLYEEQGDAEREVARASFESDVLPALGSHLRDDWRRRG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDSKLVETAFFDWLAQRTWGEPTDGDLLAFTLSQSRAA CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA