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The map label for this gene is 126445592

Identifier: 126445592

GI number: 126445592

Start: 1642838

End: 1643152

Strand: Reverse

Name: 126445592

Synonym: BMA10247_A1706

Alternate gene names: NA

Gene position: 1643152-1642838 (Counterclockwise)

Preceding gene: 126446276

Following gene: 126447533

Centisome position: 69.84

GC content: 63.49

Gene sequence:

>315_bases
GTGGAATCATACGGGGAAATGGTAATGGCAACATACAAGGAATTGCTTGCCCAATTGGATGATTTGAAGCAGCAGGCGAA
GCGCGCCCGCGCGCTCGAGTTGCCCGACGTGCTCGTCGGGTTGCGCAAGAAGATCGTCGAATACGGTCTCTCGCAGAAAG
ACCTGTTTCCGCCTCGCCTCGGACGGCCGAAGAAAGCCGACGCGCTGCCGAAGCCGCGCTATCGCGATCCGGACACGGGC
GCGACATGGACGGGGCGCGGCCGCGCGCCCGCCTGGATCGCGGGGCAGGACCGCGAGCGGTTCAGGATCGATTAG

Upstream 100 bases:

>100_bases
ATAGTCCACCTTGGCCTAATTGGGCTATGATAGCCGAAAACTGACTTCGGCACTATTCAGCATAACAACATGGTTTTCGA
TTGTGGGTCGAAAAGAGGCA

Downstream 100 bases:

>100_bases
CGCGCCGGCTGCGATCGCACGCCCGCGCGCGTCGCGGCGCTCGGCCCGGTGGCGTCGTCGAGCTTGTTTCGATGGGTGCG
CGCCGGCGTCGATGGGCGGG

Product: H-NS histone family protein

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Hns-Like Protein; H-NS-Like Proteins; H-NS Histone-Like Protein; Histone Family Protein Nucleoid-Structuring Protein H-Ns; H-NS-Like Protein; Histone-Like Nucleoid-Structuring Protein H-Ns; H-NS-Like Transcription Regulator

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MESYGEMVMATYKELLAQLDDLKQQAKRARALELPDVLVGLRKKIVEYGLSQKDLFPPRLGRPKKADALPKPRYRDPDTG
ATWTGRGRAPAWIAGQDRERFRID

Sequences:

>Translated_104_residues
MESYGEMVMATYKELLAQLDDLKQQAKRARALELPDVLVGLRKKIVEYGLSQKDLFPPRLGRPKKADALPKPRYRDPDTG
ATWTGRGRAPAWIAGQDRERFRID
>Mature_104_residues
MESYGEMVMATYKELLAQLDDLKQQAKRARALELPDVLVGLRKKIVEYGLSQKDLFPPRLGRPKKADALPKPRYRDPDTG
ATWTGRGRAPAWIAGQDRERFRID

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11898; Mature: 11898

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESYGEMVMATYKELLAQLDDLKQQAKRARALELPDVLVGLRKKIVEYGLSQKDLFPPRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
GRPKKADALPKPRYRDPDTGATWTGRGRAPAWIAGQDRERFRID
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MESYGEMVMATYKELLAQLDDLKQQAKRARALELPDVLVGLRKKIVEYGLSQKDLFPPRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
GRPKKADALPKPRYRDPDTGATWTGRGRAPAWIAGQDRERFRID
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA