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The map label for this gene is dadA [H]

Identifier: 126445570

GI number: 126445570

Start: 836250

End: 837494

Strand: Reverse

Name: dadA [H]

Synonym: BURPS668_A0860

Alternate gene names: 126445570

Gene position: 837494-836250 (Counterclockwise)

Preceding gene: 126443486

Following gene: 126443030

Centisome position: 26.78

GC content: 74.7

Gene sequence:

>1245_bases
ATGGATTTCGACGTCATCGTTCTCGGCGCCGGCATCGTCGGCGTATCGGCGGCGCTGCACCTGCGGGATCGCGGCCGCCG
GGTCGCGCTCGTCGATCGCGGCGCGCCCGGCGACGGCACGAGCTTCGGCAATGCCGGGCTCATCGAGCGCTCGTCGGTCG
CGCCCTATGCGTTCGCGCGCAGCCCGCTCGCGCTGCTGCGCTACGCGGCGAACCGCTCGACGGAACTCTATTGGGATCGC
GCGGCGCTGCCGTCGTTCGCGCCATGGCTCGCGCGCTTCTGGTGGGAATCGTCACCGCGCCGCCATGCGGCGGCCGCGCG
CGACATGCTGCCGCTCATCGAGCGCAGCGTCGCCGAGCACGACGCGCTGATCGCGCGCGCCGGCGCGGGCGAGCTCGTGC
GCGCGTGCGGCTGGATCGAGGCCTATCGGACGCCCGCCCGCCTCGAACACGCGACGCGCGACGCGCTGCTCGACGCGAGC
CGGCACGGCCTGCGCGTGACGGCGCTCGACGCTGCGGCGCTCGCCGCGCAAGAGCCGGCGCTCGGCCCGGGCTTCTGCGG
CGCGCTGCACTGGCTCGATCCGAAGAGCGTCGTCGACCCCGGCGCGCTCGTCAAAGCGTATGCGCGGCTCTTCGCGCGCG
ACGGCGGCACGCTGCTCGAAGGCGATGCGGCGACCCTCGAAGCGGGCGACGGCGGCTGGCGCGTGCGCACGGCCGAGGGC
GTCGCGGCGGCGCGCGACGTCGTCGTCGCGCTCGGCCCGTGGTCCGACACGGTGTTCGCGAAGCTCGGCTATCGGCTGCC
GCTGCGCGAGAAGCGCGGCTACCACATGCACTACGCGCCGCCCGACGGCGCGCCGCTGTCCGCGCCCGTCGTCGATCTCG
AGCACGGCTATGTGGTCGCGCCGATGCGCCGGGGCTTGCGCCTCACGACGGGCGTCGAAATCGCCGCGCGCACGCTGCCG
CCGACGGGCGTGCAGCTTGCGCGCGCGGAACGCGTCGCGCAGCCGACGTTCAGGCTCGGCCGCAGGCTCGACGCGGCGCC
GTGGCTCGGCTTTCGGCCTTGCACGCCGGACATGCGGCCCGTGATCGGCGCCGCGCCGCGGCACCGGGGCATCTGGTTCG
CGTTCGGGCACAACCATCACGGGCTCACGCTCGGCCCGATTACCGGCCGCCTGCTCGCCGAGATGATGTGCGGCGGGCCG
ACCGTCGCGAACGTCGCGCCGTTTCGCGCGGAGCGGTTTCTCTGA

Upstream 100 bases:

>100_bases
GGACGGCTCGCGCGCATCGCGCGCCGCGCCGCCTCGCTGCGGCGAACCACGCGCGCCGACGCGCTCGCCATTCGCGCGAC
ACCTCACTTGGGCTTGCTCA

Downstream 100 bases:

>100_bases
GCCGGCGCGCGCGAACCTGCCGGCGACGCCGCGAAACCCGCACGCCGGCCAATCGCTCGGACGATTCCCGGCAGTGGCGC
GCGCGACGCGCGCCACTGCG

Product: FAD-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MDFDVIVLGAGIVGVSAALHLRDRGRRVALVDRGAPGDGTSFGNAGLIERSSVAPYAFARSPLALLRYAANRSTELYWDR
AALPSFAPWLARFWWESSPRRHAAAARDMLPLIERSVAEHDALIARAGAGELVRACGWIEAYRTPARLEHATRDALLDAS
RHGLRVTALDAAALAAQEPALGPGFCGALHWLDPKSVVDPGALVKAYARLFARDGGTLLEGDAATLEAGDGGWRVRTAEG
VAAARDVVVALGPWSDTVFAKLGYRLPLREKRGYHMHYAPPDGAPLSAPVVDLEHGYVVAPMRRGLRLTTGVEIAARTLP
PTGVQLARAERVAQPTFRLGRRLDAAPWLGFRPCTPDMRPVIGAAPRHRGIWFAFGHNHHGLTLGPITGRLLAEMMCGGP
TVANVAPFRAERFL

Sequences:

>Translated_414_residues
MDFDVIVLGAGIVGVSAALHLRDRGRRVALVDRGAPGDGTSFGNAGLIERSSVAPYAFARSPLALLRYAANRSTELYWDR
AALPSFAPWLARFWWESSPRRHAAAARDMLPLIERSVAEHDALIARAGAGELVRACGWIEAYRTPARLEHATRDALLDAS
RHGLRVTALDAAALAAQEPALGPGFCGALHWLDPKSVVDPGALVKAYARLFARDGGTLLEGDAATLEAGDGGWRVRTAEG
VAAARDVVVALGPWSDTVFAKLGYRLPLREKRGYHMHYAPPDGAPLSAPVVDLEHGYVVAPMRRGLRLTTGVEIAARTLP
PTGVQLARAERVAQPTFRLGRRLDAAPWLGFRPCTPDMRPVIGAAPRHRGIWFAFGHNHHGLTLGPITGRLLAEMMCGGP
TVANVAPFRAERFL
>Mature_414_residues
MDFDVIVLGAGIVGVSAALHLRDRGRRVALVDRGAPGDGTSFGNAGLIERSSVAPYAFARSPLALLRYAANRSTELYWDR
AALPSFAPWLARFWWESSPRRHAAAARDMLPLIERSVAEHDALIARAGAGELVRACGWIEAYRTPARLEHATRDALLDAS
RHGLRVTALDAAALAAQEPALGPGFCGALHWLDPKSVVDPGALVKAYARLFARDGGTLLEGDAATLEAGDGGWRVRTAEG
VAAARDVVVALGPWSDTVFAKLGYRLPLREKRGYHMHYAPPDGAPLSAPVVDLEHGYVVAPMRRGLRLTTGVEIAARTLP
PTGVQLARAERVAQPTFRLGRRLDAAPWLGFRPCTPDMRPVIGAAPRHRGIWFAFGHNHHGLTLGPITGRLLAEMMCGGP
TVANVAPFRAERFL

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=410, Percent_Identity=28.780487804878, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44567; Mature: 44567

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDVIVLGAGIVGVSAALHLRDRGRRVALVDRGAPGDGTSFGNAGLIERSSVAPYAFAR
CCCEEEEECCCHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCHHHHC
SPLALLRYAANRSTELYWDRAALPSFAPWLARFWWESSPRRHAAAARDMLPLIERSVAEH
CHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DALIARAGAGELVRACGWIEAYRTPARLEHATRDALLDASRHGLRVTALDAAALAAQEPA
HHHEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCC
LGPGFCGALHWLDPKSVVDPGALVKAYARLFARDGGTLLEGDAATLEAGDGGWRVRTAEG
CCCCHHHHEECCCCHHHCCCHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEECCC
VAAARDVVVALGPWSDTVFAKLGYRLPLREKRGYHMHYAPPDGAPLSAPVVDLEHGYVVA
HHHCCEEEEEECCCCCHHHHHHCCCCCCHHCCCCEEEECCCCCCCCCCCEEECCCCEEEE
PMRRGLRLTTGVEIAARTLPPTGVQLARAERVAQPTFRLGRRLDAAPWLGFRPCTPDMRP
HHHCCEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCH
VIGAAPRHRGIWFAFGHNHHGLTLGPITGRLLAEMMCGGPTVANVAPFRAERFL
HHCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MDFDVIVLGAGIVGVSAALHLRDRGRRVALVDRGAPGDGTSFGNAGLIERSSVAPYAFAR
CCCEEEEECCCHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCHHHHC
SPLALLRYAANRSTELYWDRAALPSFAPWLARFWWESSPRRHAAAARDMLPLIERSVAEH
CHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DALIARAGAGELVRACGWIEAYRTPARLEHATRDALLDASRHGLRVTALDAAALAAQEPA
HHHEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCC
LGPGFCGALHWLDPKSVVDPGALVKAYARLFARDGGTLLEGDAATLEAGDGGWRVRTAEG
CCCCHHHHEECCCCHHHCCCHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEECCC
VAAARDVVVALGPWSDTVFAKLGYRLPLREKRGYHMHYAPPDGAPLSAPVVDLEHGYVVA
HHHCCEEEEEECCCCCHHHHHHCCCCCCHHCCCCEEEECCCCCCCCCCCEEECCCCEEEE
PMRRGLRLTTGVEIAARTLPPTGVQLARAERVAQPTFRLGRRLDAAPWLGFRPCTPDMRP
HHHCCEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCH
VIGAAPRHRGIWFAFGHNHHGLTLGPITGRLLAEMMCGGPTVANVAPFRAERFL
HHCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA