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The map label for this gene is rfbF [H]

Identifier: 126445354

GI number: 126445354

Start: 1862824

End: 1863831

Strand: Reverse

Name: rfbF [H]

Synonym: BURPS668_A1917

Alternate gene names: 126445354

Gene position: 1863831-1862824 (Counterclockwise)

Preceding gene: 126442520

Following gene: 126445040

Centisome position: 59.6

GC content: 73.12

Gene sequence:

>1008_bases
ATGACGACCTTGGGCGCGCTGGTGATTCTGTATTACCCGACCGACGAGCAACTGTCGGGCCTGGAGGCGCTCGCGCGCGA
CAGCGACGCGCTCGCGGTGATCGACAACACGCCGCACGAGCACGCGGCGGCGCGCGAGCGGGTGCGCGCGCTGTCGGCGC
GGGCGCACGGCGAAGCGCGCGTCGTGTGGCGGCACCACGGCAACCGCGGCGGGGTGGCGGGCGCGTACAACGCGGGGCTG
TCGGCGCTGTTCGCGCAGGGCGTGGAGGCGGTCGCGCTGTTCGACCAGGACTCGACGGTGCCGGCCGCGTACTTCGCGCG
GATGCGCGACGCGTGCGCGCAACTGGGCACGCAACCGGGCCCGCATGCGGGCGCGCATGCGGGCGCGTTCATCGCGGGCC
CGCGGATCTACGACGCGAACGAGCAGCGCTTCCTGCCGGAGCTGATGACGAGCGGAGTGGCGGTGCGCCGCGTGCGGGTG
GAAGGCGAGCGCGCGCCGCAGCGCTGCGCGTTCCTGATCTCGTCGGGCAGCGTGATCTCGCGGGGCGCGTACGCGCGGCT
CGGCCGCTTCGACGAGGCGCTGTTCATCGACCACGTCGACACCGAGTACTGCCTGCGCGCGCTGGCGCACAACGTGCCGC
TGTACGTGGTGCCGTCGCTGGTGCTGACGCACCGGATCGGCGCGCGGCGCCGGCACAAGGTGGGGCCGTTCGAGCTGACG
GCGATGCATCATGGGTGGCTGCGCCGATACTACGGCGCGCGCAACGCGATGCAGCTGGGGCTGCAGTACGGGTTGCGGTT
TCCGGTGGCGCTGGTGCCGAATCTGCTGACGATCTGGCAGGTGGTCCAGGTGGTGCTGTGCGAGCGGGAGAAGGGCGCGA
AGCTGCGCGGGATCGCGCTGGGCGTGCTCGACGGGGTGTTCGGGCGCCTGGGGTCGTTCGAGGCGGCGCGCGCGGGCCAC
CGCACGGCACGCGAGGAGGCGATGCGCGAAGCGCGGCGGCAGTCGTGA

Upstream 100 bases:

>100_bases
GACGAAGACGAACGGAGAAGCATCGAAGTCCTGACGATGCGGTGCGTCGCCGCGACGGCGAAGCGGGCATGCCGGACCTC
GAACCACCGAAGGAAGAGCG

Downstream 100 bases:

>100_bases
GACGCGGCGCGCGGACCCCAGCGTCAGCACGACGCGATGAGCGCGGTGAAGGGACAACGGCTCGACCGGGCGCGCATGGC
ATCCACGCCGCCGTATCGAC

Product: rhamnosyltransferase II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALSARAHGEARVVWRHHGNRGGVAGAYNAGL
SALFAQGVEAVALFDQDSTVPAAYFARMRDACAQLGTQPGPHAGAHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRV
EGERAPQRCAFLISSGSVISRGAYARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELT
AMHHGWLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIALGVLDGVFGRLGSFEAARAGH
RTAREEAMREARRQS

Sequences:

>Translated_335_residues
MTTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALSARAHGEARVVWRHHGNRGGVAGAYNAGL
SALFAQGVEAVALFDQDSTVPAAYFARMRDACAQLGTQPGPHAGAHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRV
EGERAPQRCAFLISSGSVISRGAYARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELT
AMHHGWLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIALGVLDGVFGRLGSFEAARAGH
RTAREEAMREARRQS
>Mature_334_residues
TTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALSARAHGEARVVWRHHGNRGGVAGAYNAGLS
ALFAQGVEAVALFDQDSTVPAAYFARMRDACAQLGTQPGPHAGAHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRVE
GERAPQRCAFLISSGSVISRGAYARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELTA
MHHGWLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIALGVLDGVFGRLGSFEAARAGHR
TAREEAMREARRQS

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR006446 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 36674; Mature: 36543

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALSARAHGEAR
CCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
VVWRHHGNRGGVAGAYNAGLSALFAQGVEAVALFDQDSTVPAAYFARMRDACAQLGTQPG
EEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
PHAGAHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRVEGERAPQRCAFLISSGSVIS
CCCCCCCCEEEECCEEECCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHEEEEECCCCHH
RGAYARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELT
CCHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEH
AMHHGWLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIAL
HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
GVLDGVFGRLGSFEAARAGHRTAREEAMREARRQS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALSARAHGEAR
CCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
VVWRHHGNRGGVAGAYNAGLSALFAQGVEAVALFDQDSTVPAAYFARMRDACAQLGTQPG
EEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
PHAGAHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRVEGERAPQRCAFLISSGSVIS
CCCCCCCCEEEECCEEECCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHEEEEECCCCHH
RGAYARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELT
CCHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEH
AMHHGWLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIAL
HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
GVLDGVFGRLGSFEAARAGHRTAREEAMREARRQS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]