Click here to switch to the map view.

The map label for this gene is pbpG [H]

Identifier: 126445342

GI number: 126445342

Start: 671725

End: 672777

Strand: Reverse

Name: pbpG [H]

Synonym: BURPS668_A0703

Alternate gene names: 126445342

Gene position: 672777-671725 (Counterclockwise)

Preceding gene: 126444087

Following gene: 126444418

Centisome position: 21.51

GC content: 66.0

Gene sequence:

>1053_bases
GTGTTGCCGATCGTCCTCGCCTCCGCGCTCGCCGTTCCGTCGTTCGGCGCACAAGCGCGATCGTCCGTGTCGAAGCGGCA
TGCCGCGGCGGCCGCGTCGATTCGCACGGCCAGCTTTCATCCGCAGTCGGGCCACGCGCCGCTCGCGCGGCATGCGCTCG
CCTCGCGCCACCTGAAGGCCGGCCGCTACCGGCTGGCGGGCGGCGTGCGCCGCGTGGCGTTCTCGCCGCGCGCGCCGCTC
GGCGGCCGCGCATTCGAGCCGCGCGACGCGTCGCAATCGTTCGGACTCCGGTCGAACATCGTCTACATGGTCGACCAGCA
CACGGGCGAAACACTGTTCGATCGGAATTCGCGATCGGTCGTGCCGATCGCGTCGGTGACGAAGCTGATGACCGCGATGG
TCGTGCTCGATTCGAACGCGCCGCTCGACGAGCGGATCGAAGTGACCGACGACGATCGCGATCAGGACAAGTTCACCGGC
TCGCGCCTCGCGATCGGCTCGGCGCTCAGCCGCGACGACATGCTTCACATCGCGCTGATGGCGTCCGAGAATCGCGCGGC
GGCGGCGCTGTCGCGCTACTATCCGGGCGGCCGTGAAGCGTTCGTCGATGCGATGAACCGCAAGGCGCGATCGCTCGGCA
TGGTCGACACGTACTTCGAGAATCCCACCGGCCTGTCGAAACACAACGTATCGAGCGCGCGCGATCTCGCGAAGATGGTC
GAGGCCGCTTACCAATATCCGTTGATCCGCCAGTATTCGACCGATCTGAAATACGACGTCGACACGGGCCTGCGCACGCT
CTATTACCACAGCACGAACGTCCTGCTGCGCGATAACGCCTGGAACATCGGCGTGCAGAAGACGGGCTATATCAAGGAAT
CCGGCATTTGCCTCGTGATGCAGACGACGATCGACGGACGCGACGTCGTGATGGTGCTGCTCGATTCGGCCGGGCGGCAT
TCCGACTTCTTCGACGCCGCGCGGCTGCGCACGATGCTGACCTCGGGCGCCGCGCACGTGACGGAGGCAAATTCGGCGAC
TAGCGGCAATTGA

Upstream 100 bases:

>100_bases
AAAGCCGGCATCCGATATAAATAGGGGCGTCATGAAAGCGATACCGTTTTCCTCGTTGAAAGCGATGTGCGAATTCGTAC
TTCGTACATCGAAACGGACG

Downstream 100 bases:

>100_bases
CGAACCGGGCCGGGTTCGGCGGCGGGCGCTCCGTCGGCGCCGCGAGCCGCCGGCCGGCGTCGGACCACGCGCCGCGGCGC
ACCGTCTCGCGCGATGCGCC

Product: D-alanyl-D-alanine carboxypeptidase family protein

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MLPIVLASALAVPSFGAQARSSVSKRHAAAAASIRTASFHPQSGHAPLARHALASRHLKAGRYRLAGGVRRVAFSPRAPL
GGRAFEPRDASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAPLDERIEVTDDDRDQDKFTG
SRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAMNRKARSLGMVDTYFENPTGLSKHNVSSARDLAKMV
EAAYQYPLIRQYSTDLKYDVDTGLRTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRH
SDFFDAARLRTMLTSGAAHVTEANSATSGN

Sequences:

>Translated_350_residues
MLPIVLASALAVPSFGAQARSSVSKRHAAAAASIRTASFHPQSGHAPLARHALASRHLKAGRYRLAGGVRRVAFSPRAPL
GGRAFEPRDASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAPLDERIEVTDDDRDQDKFTG
SRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAMNRKARSLGMVDTYFENPTGLSKHNVSSARDLAKMV
EAAYQYPLIRQYSTDLKYDVDTGLRTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRH
SDFFDAARLRTMLTSGAAHVTEANSATSGN
>Mature_350_residues
MLPIVLASALAVPSFGAQARSSVSKRHAAAAASIRTASFHPQSGHAPLARHALASRHLKAGRYRLAGGVRRVAFSPRAPL
GGRAFEPRDASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAPLDERIEVTDDDRDQDKFTG
SRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAMNRKARSLGMVDTYFENPTGLSKHNVSSARDLAKMV
EAAYQYPLIRQYSTDLKYDVDTGLRTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRH
SDFFDAARLRTMLTSGAAHVTEANSATSGN

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=237, Percent_Identity=48.5232067510549, Blast_Score=221, Evalue=6e-59,
Organism=Escherichia coli, GI87082022, Length=237, Percent_Identity=30.8016877637131, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 38082; Mature: 38082

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPIVLASALAVPSFGAQARSSVSKRHAAAAASIRTASFHPQSGHAPLARHALASRHLKA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHC
GRYRLAGGVRRVAFSPRAPLGGRAFEPRDASQSFGLRSNIVYMVDQHTGETLFDRNSRSV
CCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCHHHCCCCCCE
VPIASVTKLMTAMVVLDSNAPLDERIEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALM
ECHHHHHHHHHHHEEECCCCCCCCCEECCCCCCCHHHHCCCCEECCCCCCCCCEEEEEEE
ASENRAAAALSRYYPGGREAFVDAMNRKARSLGMVDTYFENPTGLSKHNVSSARDLAKMV
ECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHH
EAAYQYPLIRQYSTDLKYDVDTGLRTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVM
HHHHCCCHHHHHCCCCCEECCCCCEEEEEECCEEEEECCCEECCCCCCCCEECCCEEEEE
QTTIDGRDVVMVLLDSAGRHSDFFDAARLRTMLTSGAAHVTEANSATSGN
EECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCC
>Mature Secondary Structure
MLPIVLASALAVPSFGAQARSSVSKRHAAAAASIRTASFHPQSGHAPLARHALASRHLKA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHC
GRYRLAGGVRRVAFSPRAPLGGRAFEPRDASQSFGLRSNIVYMVDQHTGETLFDRNSRSV
CCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCHHHCCCCCCE
VPIASVTKLMTAMVVLDSNAPLDERIEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALM
ECHHHHHHHHHHHEEECCCCCCCCCEECCCCCCCHHHHCCCCEECCCCCCCCCEEEEEEE
ASENRAAAALSRYYPGGREAFVDAMNRKARSLGMVDTYFENPTGLSKHNVSSARDLAKMV
ECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHH
EAAYQYPLIRQYSTDLKYDVDTGLRTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVM
HHHHCCCHHHHHCCCCCEECCCCCEEEEEECCEEEEECCCEECCCCCCCCEECCCEEEEE
QTTIDGRDVVMVLLDSAGRHSDFFDAARLRTMLTSGAAHVTEANSATSGN
EECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]