| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445265
Identifier: 126445265
GI number: 126445265
Start: 1501894
End: 1502730
Strand: Reverse
Name: 126445265
Synonym: BURPS668_A1570
Alternate gene names: NA
Gene position: 1502730-1501894 (Counterclockwise)
Preceding gene: 126442831
Following gene: 126444072
Centisome position: 48.05
GC content: 74.43
Gene sequence:
>837_bases ATGACGCCGTCCGTCATCGCGCTCGTGCTGTTCGCGGCGATCCTGCACGCGACGTGGAACGCGCTGCTGAAAAGCGGCGC GGACCGCCTCTGGAGCCTCACCGTGATGAGCTTCGCGACGACGGCCGCCGCCGCCGTCTGCGCGGCGCTGCTGCCGCTGC CGGCGCGCGCGAGCTGGCCTTATCTGGCGGCGTCCGCCGCCTTGCAGGTCGGCTACAGCGTATTTCTCGCGCTCGCGTAT CAGCGCGCGGCGCTCGGCCAGGTCTACCCGGTCGTCCGCGGTGCGGTGCCGCTCCTCGTCACGCTGGGCGGCTACGCGTG GGCGGGCCAGCGCCTCGGCGGCGCGCCGCTCGCGGGCATCGCGCTCGTGTCGGGCGGCATCGCGAGCCTCGCGCTCGGCA GGACGAGGATTCATTCGCGCGCGCTCGCCGCGGCGCTCGCGACCGCGCTCTTCATCGGCGGCTACGTGACGATCGACGGC CTCGGCGCGCGCGTAGCGGGCCACCCGCTCGCGTACGCGGCGTGGATCTTCATCGTCTACGGCGCCGCGATGCCGGCCGT GTTCCTGCTGCTCGGCCGCCGCCCGCGCGCGGGCTTGCCGCGCGGCGACACGCTGAAATCGGCGGCGGGCGGCCTCATTT CGCTGATCGGCTACGCGGCCGTCGTCGACGCCTTGTCGCGCGGCCCCGTCGGCCCGATCGCCGCGTTGCGCGAAACGAGC ATCGTGTTCTCGGCGCTGATCGGCTGGCTCTGGCTCGGCGAAAAGCCGAGCGGGCCGCGCTTCGCCGCATGCGCGGCGGT GGCGCTCGGCGCGGCCTGCCTCGCGTACGCGGCCTGA
Upstream 100 bases:
>100_bases CCGGCGTAGGAATGAGGTCCGCGATGAGTCGTCCGATATCCGCCCGCCGCCGCGCCGCGGCCCGGCTTTCCGTGTTTCCC GCGCCGTTCGACCCGCGCCG
Downstream 100 bases:
>100_bases TGCGCGCGCCGCGCGGCGTGCGTCATACGCGAACGGGCGAGCGTGCGACGTGAGCCGTTCCTGCGCGGCATGCGCGTCAG CCGGCGGCCGCGGCAGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Transporter DME Family DMT Superfamily; Transporter Dme Family; Inner Membrane Protein; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; Drug/Metabolite Transporter Superfamily Permease; DMT Family Permease
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTPSVIALVLFAAILHATWNALLKSGADRLWSLTVMSFATTAAAAVCAALLPLPARASWPYLAASAALQVGYSVFLALAY QRAALGQVYPVVRGAVPLLVTLGGYAWAGQRLGGAPLAGIALVSGGIASLALGRTRIHSRALAAALATALFIGGYVTIDG LGARVAGHPLAYAAWIFIVYGAAMPAVFLLLGRRPRAGLPRGDTLKSAAGGLISLIGYAAVVDALSRGPVGPIAALRETS IVFSALIGWLWLGEKPSGPRFAACAAVALGAACLAYAA
Sequences:
>Translated_278_residues MTPSVIALVLFAAILHATWNALLKSGADRLWSLTVMSFATTAAAAVCAALLPLPARASWPYLAASAALQVGYSVFLALAY QRAALGQVYPVVRGAVPLLVTLGGYAWAGQRLGGAPLAGIALVSGGIASLALGRTRIHSRALAAALATALFIGGYVTIDG LGARVAGHPLAYAAWIFIVYGAAMPAVFLLLGRRPRAGLPRGDTLKSAAGGLISLIGYAAVVDALSRGPVGPIAALRETS IVFSALIGWLWLGEKPSGPRFAACAAVALGAACLAYAA >Mature_277_residues TPSVIALVLFAAILHATWNALLKSGADRLWSLTVMSFATTAAAAVCAALLPLPARASWPYLAASAALQVGYSVFLALAYQ RAALGQVYPVVRGAVPLLVTLGGYAWAGQRLGGAPLAGIALVSGGIASLALGRTRIHSRALAAALATALFIGGYVTIDGL GARVAGHPLAYAAWIFIVYGAAMPAVFLLLGRRPRAGLPRGDTLKSAAGGLISLIGYAAVVDALSRGPVGPIAALRETSI VFSALIGWLWLGEKPSGPRFAACAAVALGAACLAYAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28173; Mature: 28041
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSVIALVLFAAILHATWNALLKSGADRLWSLTVMSFATTAAAAVCAALLPLPARASWP CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YLAASAALQVGYSVFLALAYQRAALGQVYPVVRGAVPLLVTLGGYAWAGQRLGGAPLAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHH ALVSGGIASLALGRTRIHSRALAAALATALFIGGYVTIDGLGARVAGHPLAYAAWIFIVY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHCCCHHHHHHHHHHHH GAAMPAVFLLLGRRPRAGLPRGDTLKSAAGGLISLIGYAAVVDALSRGPVGPIAALRETS HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVFSALIGWLWLGEKPSGPRFAACAAVALGAACLAYAA HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPSVIALVLFAAILHATWNALLKSGADRLWSLTVMSFATTAAAAVCAALLPLPARASWP CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC YLAASAALQVGYSVFLALAYQRAALGQVYPVVRGAVPLLVTLGGYAWAGQRLGGAPLAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHH ALVSGGIASLALGRTRIHSRALAAALATALFIGGYVTIDGLGARVAGHPLAYAAWIFIVY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHCCCHHHHHHHHHHHH GAAMPAVFLLLGRRPRAGLPRGDTLKSAAGGLISLIGYAAVVDALSRGPVGPIAALRETS HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IVFSALIGWLWLGEKPSGPRFAACAAVALGAACLAYAA HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA