| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445111
Identifier: 126445111
GI number: 126445111
Start: 1182347
End: 1182844
Strand: Reverse
Name: 126445111
Synonym: BURPS668_A1249
Alternate gene names: NA
Gene position: 1182844-1182347 (Counterclockwise)
Preceding gene: 126443106
Following gene: 126444188
Centisome position: 37.82
GC content: 67.47
Gene sequence:
>498_bases ATGTCTTCGATTTCGTCCCGGCCGCATAAGCGGCCGCCCGCCTCCCCGTGGCTGTCGCTCGTCATCCGCCTGCTCGGCGT CAGTTTCGTGCTGTTCTTCGGTGCGGCGATCGTCACGATCCTGCTCGGCATCGACCATCGGGCCGCGGGCGATCCGATCG GCCTCCTGGTGCTGCGCCTCGTACGCTGGGGCGGCGTGCACGGCGGCGGCGAGCATTACGAACTGATGATCTCGACCGTT TATGTCGTCTGGGGCGCGTTTCTGTGGAAAGCCGCCGACGCTCCGTTCGAGCACGCGCTGTTTCTCGACTTCACGGTCGT CGCGAACGTCGCGCACTTCGGGTTGATGTTCGTCCAGGGGCTGACGATGCCGGGCGAGCACCTCCATCTGGTCGGCGACG TCGCGCTCGGCTGGCTCGCGCTCGCGCTCTTCGCCGCGACGTGGCTTCCCGCACGAGGCAACGCGCGCAAGCGCCATACC GCGGGTGTCGACCGCTGA
Upstream 100 bases:
>100_bases ACGCGCGCGGCGCGCCTGCATGCGTCTTCCGTCGCCTCGAGCGCGCCGGCCCCGCGCCGGCGCGCTCGCCCCGAACGATC TCACCCGCACGCTGCCTGCC
Downstream 100 bases:
>100_bases ATGCCGCGGCCCGCGCGGCGCGTTGCCGGCACGGGCGAGCAACGCGCGGCACGCCGCCCGTGCCTTTGCATCCCATTCGC GCGGCTTCGGCGCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRLVRWGGVHGGGEHYELMISTV YVVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQGLTMPGEHLHLVGDVALGWLALALFAATWLPARGNARKRHT AGVDR
Sequences:
>Translated_165_residues MSSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRLVRWGGVHGGGEHYELMISTV YVVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQGLTMPGEHLHLVGDVALGWLALALFAATWLPARGNARKRHT AGVDR >Mature_164_residues SSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRLVRWGGVHGGGEHYELMISTVY VVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQGLTMPGEHLHLVGDVALGWLALALFAATWLPARGNARKRHTA GVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17924; Mature: 17793
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH VRWGGVHGGGEHYELMISTVYVVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQG HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LTMPGEHLHLVGDVALGWLALALFAATWLPARGNARKRHTAGVDR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCC >Mature Secondary Structure SSISSRPHKRPPASPWLSLVIRLLGVSFVLFFGAAIVTILLGIDHRAAGDPIGLLVLRL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH VRWGGVHGGGEHYELMISTVYVVWGAFLWKAADAPFEHALFLDFTVVANVAHFGLMFVQG HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LTMPGEHLHLVGDVALGWLALALFAATWLPARGNARKRHTAGVDR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA