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The map label for this gene is ycaQ [H]

Identifier: 126444907

GI number: 126444907

Start: 960701

End: 962035

Strand: Reverse

Name: ycaQ [H]

Synonym: BURPS668_A0990

Alternate gene names: 126444907

Gene position: 962035-960701 (Counterclockwise)

Preceding gene: 126442936

Following gene: 126442357

Centisome position: 30.76

GC content: 69.89

Gene sequence:

>1335_bases
ATGATTGTCAGACGCCCGCGCGGCAATGCTTCGCGGCGCGCGGCGCGCCATGCCGATTCGCGCTACAGTGGCACATCCGT
TTCGTGCGTCCATTCCCCACCGCTCGTGTCCGCCCCGCTCTCGATCGCTTCGGCCCGCGCGCTGCATCTCGCCGCGCAGG
GCCTCTTGACGCCGCCTCGCCGCAAGGCGGTCAAGGCCGACGTGCTCGCCGCCGTCCGCCGGATGGGCCAACTGCAGATC
GACACGATCCATGTCGTCGCGCGCAGCCCGTATCTCGTGCTGTTCAGCCGGCTCGGCGCATATGCGCCGCAATGGCTCGA
CGAACATCTCGCCGACGCGAAACTGTTCGAGTACTGGTCGCATGAAGCGTGCTTCCTGCCGATCGAGGACTTCGGCCTGA
TGCGCCACAAGATGCTCAACCCCGTCGGCATGGGCTGGAAATACGCGGCCGAATGGCACGCGCAGCATCGCGACGCAATC
GACGCGCTGCTCGCGCATGTTCGCGCGCGCGGCCCCGTGCGCTCCGCCGATTTCGCGCGCGGCGCCGGCAAGGGCAACGG
CTGGTGGGACTGGAAGCCCGAGAAGCGGCATCTCGAAGTGCTGTTCTCGACCGGGCAATTGATGGTCGCCGAGCGGCGCA
ACTTCCAGCGCGTCTATGACGTCGCCGAACGCGTGCTGCCGGACTGGGACGACGCGCGCGACCTGCCGCCGCGCGCGGCG
GTGGTGCCGCGCCTCGTCGGCAACACCTGTCGCGCGCTCGGCATCGTCCGCGCGGACTGGATCGCCGATTATTACCGGCT
GCCGAAGCGCTCGTATCGCGACGAACTGCATGCGCTCGCGGACGCGGGCGAGCTGCTGCCCGTCGCGGTCGACGGCTGGC
ACGCCGACGCGTTCGTGCATCGCGAGCTCGCGCCGCTCGTCGACGCCGCGCGCGACGGCGCGCTGCGCCCGACGGTCACG
ACGCTGCTGTCGCCGTTCGATCCGGTCGTCTGGGATCGGCGGCGTGCATCGGCGCTGTTCGATTTCGACTACACGATCGA
ATGCTACACGCCCGCGCACAAGCGTCGCTACGGCTACTTCTGCCTGCCGATCCTGCACCGCGGGCGGCTCGTCGGCCGCG
TCGACGCAAAGGCGCATCGCACGCAGCGCGTGTTCGAGTTGAAGGCGGTGCACATTGAGCCGGGCGTGCGGCTCGGCGCG
GGGCTCGCGACGGATGTCGGCCGCGCGATCCGCAAGCTCGCCGACTGGCACGAGACGCCCGTCGTCGAGGCCGGCCACGC
GCCGAAGGAGATCGCGCGGGCAATCGGCGCGGATCGCGTCGCCAAGCCGCGATAG

Upstream 100 bases:

>100_bases
GTCCGGACTCGCTCCCTGCGTGCCATAGAGGTATCGTGCGTCGGAAGCAGAGTACTGGTTTCGATGAGACTATAAGGAAA
CTTCCGAGAGACTTCTGTCA

Downstream 100 bases:

>100_bases
CGATGCGATGTGGGCGTGCGGGGCGTGCGCGCGCGGCCGTGGCGGTCGCGCGGCGCGAAATGCGTGGCGGATGCGGCGCG
ACGAAAACCGGGCAGCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MIVRRPRGNASRRAARHADSRYSGTSVSCVHSPPLVSAPLSIASARALHLAAQGLLTPPRRKAVKADVLAAVRRMGQLQI
DTIHVVARSPYLVLFSRLGAYAPQWLDEHLADAKLFEYWSHEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQHRDAI
DALLAHVRARGPVRSADFARGAGKGNGWWDWKPEKRHLEVLFSTGQLMVAERRNFQRVYDVAERVLPDWDDARDLPPRAA
VVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDELHALADAGELLPVAVDGWHADAFVHRELAPLVDAARDGALRPTVT
TLLSPFDPVVWDRRRASALFDFDYTIECYTPAHKRRYGYFCLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPGVRLGA
GLATDVGRAIRKLADWHETPVVEAGHAPKEIARAIGADRVAKPR

Sequences:

>Translated_444_residues
MIVRRPRGNASRRAARHADSRYSGTSVSCVHSPPLVSAPLSIASARALHLAAQGLLTPPRRKAVKADVLAAVRRMGQLQI
DTIHVVARSPYLVLFSRLGAYAPQWLDEHLADAKLFEYWSHEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQHRDAI
DALLAHVRARGPVRSADFARGAGKGNGWWDWKPEKRHLEVLFSTGQLMVAERRNFQRVYDVAERVLPDWDDARDLPPRAA
VVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDELHALADAGELLPVAVDGWHADAFVHRELAPLVDAARDGALRPTVT
TLLSPFDPVVWDRRRASALFDFDYTIECYTPAHKRRYGYFCLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPGVRLGA
GLATDVGRAIRKLADWHETPVVEAGHAPKEIARAIGADRVAKPR
>Mature_444_residues
MIVRRPRGNASRRAARHADSRYSGTSVSCVHSPPLVSAPLSIASARALHLAAQGLLTPPRRKAVKADVLAAVRRMGQLQI
DTIHVVARSPYLVLFSRLGAYAPQWLDEHLADAKLFEYWSHEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQHRDAI
DALLAHVRARGPVRSADFARGAGKGNGWWDWKPEKRHLEVLFSTGQLMVAERRNFQRVYDVAERVLPDWDDARDLPPRAA
VVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDELHALADAGELLPVAVDGWHADAFVHRELAPLVDAARDGALRPTVT
TLLSPFDPVVWDRRRASALFDFDYTIECYTPAHKRRYGYFCLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPGVRLGA
GLATDVGRAIRKLADWHETPVVEAGHAPKEIARAIGADRVAKPR

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=390, Percent_Identity=51.7948717948718, Blast_Score=414, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 49856; Mature: 49856

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRRPRGNASRRAARHADSRYSGTSVSCVHSPPLVSAPLSIASARALHLAAQGLLTPPR
CCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCH
RKAVKADVLAAVRRMGQLQIDTIHVVARSPYLVLFSRLGAYAPQWLDEHLADAKLFEYWS
HHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
HEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQHRDAIDALLAHVRARGPVRSADFAR
CCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
GAGKGNGWWDWKPEKRHLEVLFSTGQLMVAERRNFQRVYDVAERVLPDWDDARDLPPRAA
CCCCCCCCCCCCCCHHHEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDELHALADAGELLPVAVDGWHADAFVH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
RELAPLVDAARDGALRPTVTTLLSPFDPVVWDRRRASALFDFDYTIECYTPAHKRRYGYF
HHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHCCHHHCEEECCCEEEEEECCHHHCCCCEE
CLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPGVRLGAGLATDVGRAIRKLADWHETP
EEHHHHCCCEEEECCHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
VVEAGHAPKEIARAIGADRVAKPR
CCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIVRRPRGNASRRAARHADSRYSGTSVSCVHSPPLVSAPLSIASARALHLAAQGLLTPPR
CCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCH
RKAVKADVLAAVRRMGQLQIDTIHVVARSPYLVLFSRLGAYAPQWLDEHLADAKLFEYWS
HHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
HEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQHRDAIDALLAHVRARGPVRSADFAR
CCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
GAGKGNGWWDWKPEKRHLEVLFSTGQLMVAERRNFQRVYDVAERVLPDWDDARDLPPRAA
CCCCCCCCCCCCCCHHHEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDELHALADAGELLPVAVDGWHADAFVH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
RELAPLVDAARDGALRPTVTTLLSPFDPVVWDRRRASALFDFDYTIECYTPAHKRRYGYF
HHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHCCHHHCEEECCCEEEEEECCHHHCCCCEE
CLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPGVRLGAGLATDVGRAIRKLADWHETP
EEHHHHCCCEEEECCHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
VVEAGHAPKEIARAIGADRVAKPR
CCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]