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The map label for this gene is yjbQ [C]

Identifier: 126444836

GI number: 126444836

Start: 115628

End: 116047

Strand: Reverse

Name: yjbQ [C]

Synonym: BURPS668_A0131

Alternate gene names: 126444836

Gene position: 116047-115628 (Counterclockwise)

Preceding gene: 126444123

Following gene: 126443251

Centisome position: 3.71

GC content: 65.0

Gene sequence:

>420_bases
ATGCAACAGTCGATTCAACACATCACCGTCGAGGCGCGCGGGCGCGGTCTCGTCGAGTTCACGCCGCAAGTACGCGCGTT
CGTCGAAGTGCAGTCGGTCAGCACCGGCCTGCTTACCGTGTTCTGCCGGCACACGTCCGCTTCACTGCTGATCCAGGAGA
ATGCGGACCCGTCGGTGCAGCGCGATATCGAACGATACTTCGCCGCGCTCGCACCCGAGGACGACGCGCGCTACGAGCAC
GACACCGAAGGCGCCGACGACATGCCGGCGCACCTGCGCACGGCGCTCACGCAGGTGCAGCTATCGATTCCGGTCGAGCA
TGGGCGCATGGTGCTCGGCACGTGGCAAGGCATCTATCTGTTCGAACATCGGCGCGCCCCGCATCGGCGCGATGTGGTGC
TGCATCTGATCGGCGAGTGA

Upstream 100 bases:

>100_bases
GACGGCACCGAAGTGGCGCGTGTCGTGCGCCCGACCCATGCCGAGCAGATCGAAACCATCGGCTTCGCCGCGCTGGTCTG
ATCAACCGACGCTCATCGCC

Downstream 100 bases:

>100_bases
ACGGGCCGCGAGCATGGCGTGGGCGGCGCCGCGCGCGACCCGGCGCGGCGTGCGCGGCTCGATGCCCTCCGCCTCTTGAT
CGTCCGTCGCGGCCGTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MQQSIQHITVEARGRGLVEFTPQVRAFVEVQSVSTGLLTVFCRHTSASLLIQENADPSVQRDIERYFAALAPEDDARYEH
DTEGADDMPAHLRTALTQVQLSIPVEHGRMVLGTWQGIYLFEHRRAPHRRDVVLHLIGE

Sequences:

>Translated_139_residues
MQQSIQHITVEARGRGLVEFTPQVRAFVEVQSVSTGLLTVFCRHTSASLLIQENADPSVQRDIERYFAALAPEDDARYEH
DTEGADDMPAHLRTALTQVQLSIPVEHGRMVLGTWQGIYLFEHRRAPHRRDVVLHLIGE
>Mature_139_residues
MQQSIQHITVEARGRGLVEFTPQVRAFVEVQSVSTGLLTVFCRHTSASLLIQENADPSVQRDIERYFAALAPEDDARYEH
DTEGADDMPAHLRTALTQVQLSIPVEHGRMVLGTWQGIYLFEHRRAPHRRDVVLHLIGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=133, Percent_Identity=42.8571428571429, Blast_Score=116, Evalue=6e-28,
Organism=Drosophila melanogaster, GI221476589, Length=132, Percent_Identity=38.6363636363636, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI221476594, Length=132, Percent_Identity=38.6363636363636, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15754; Mature: 15754

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQSIQHITVEARGRGLVEFTPQVRAFVEVQSVSTGLLTVFCRHTSASLLIQENADPSVQ
CCCCCEEEEEEECCCEEEEECCHHEEEEHHHCCCCCHHHEEECCCCCEEEEECCCCCHHH
RDIERYFAALAPEDDARYEHDTEGADDMPAHLRTALTQVQLSIPVEHGRMVLGTWQGIYL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCEEEEEECCEEEE
FEHRRAPHRRDVVLHLIGE
EECCCCCCCCCEEEEEECC
>Mature Secondary Structure
MQQSIQHITVEARGRGLVEFTPQVRAFVEVQSVSTGLLTVFCRHTSASLLIQENADPSVQ
CCCCCEEEEEEECCCEEEEECCHHEEEEHHHCCCCCHHHEEECCCCCEEEEECCCCCHHH
RDIERYFAALAPEDDARYEHDTEGADDMPAHLRTALTQVQLSIPVEHGRMVLGTWQGIYL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCEEEEEECCEEEE
FEHRRAPHRRDVVLHLIGE
EECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]