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The map label for this gene is bipC [H]

Identifier: 126444789

GI number: 126444789

Start: 2097940

End: 2099205

Strand: Reverse

Name: bipC [H]

Synonym: BURPS668_A2161

Alternate gene names: 126444789

Gene position: 2099205-2097940 (Counterclockwise)

Preceding gene: 126443663

Following gene: 126444061

Centisome position: 67.12

GC content: 71.33

Gene sequence:

>1266_bases
GTGCGTATGTCAATCGGTGTGCAAAGCAGCGGCATGAACATCAGCCACGCGGAGCTGTCCCGGCTCGTCGATGCGGGCAA
GTCCGAGCAGGGCGACAAGGCGGTTCGCGACGACGGGCGCGCGCTCGCGCGCGCGGACGCGGCGCTCGCGGCCGTCGTCG
GCGAGCGCGTGGCGGCGCGGCGCGATGCGGTTGCGGGCTCGGGCGCGCAGCGCGTCGAGCTCGCTCGGCCGAAACCCGAC
GCGCAGACGCGCGCGACGGACCGGCGGACGGTCTCGGGGCTGGAGCGCGAGCACAAGCGGCTCGCCGCGAGCCAGACGCC
GCGCGTGACCGGCATGCACGATGCGCTCGTGCAGCGCCACGTGTCGCTCGACGGCGCGAAGGCGGCGCACGGCGAAGGCG
TGAAGCGCGCCGCGGGCGATGCGCCGCGCGCTGCGGCGGACGCGCCGCAGCGCTTCGCGTTCGCCGACGACAAGGCGTTC
GACGCGATGCTCGCGCTCGGCGCCGCGATGCAGAAGAACGTGCAGTCGGATCTCGCGATGCAGGGCAAGCTCACGATGCT
CGCGCACGACGCGATGATGAGCGCGGCCGCGCAGGATCGCAGCATCGGCGCCGCGCAGATGACGGCCGCGATCGCGGGCG
GCGCGCTGCAGGCGACGACCTCGCTCGGCGGCGCGATGCAGCAGATGAAGAGCTTGAGCACGAAGTCGATGTCGATCGAA
AAGGAGCTGAAGCCGCAGGCGGAGCTCAAGCAGTTCCACGCGGAGCAGGCGCTCGAGCTGCGCGGCATCAACAAGCCGGT
GTTGTCGAACGACGAAGTGTCGCACGTGAAGATCAAGCGCGACACCGGGGAGACCGTGCGCCACGAGATCGACCACGGCG
GCGAGCGGATGAGCGACGAGCATGCGAGCGTGCTCGCGCAGGAAGCGCCCGCCCGTCAGCACCGGATCGACATGCACGGC
ATGCGTCACGAGGAGAACCTCGTGAAGGCGGGCCGCCAGCAGATGAAGGGCGATCTGCTCCAGTCGGGCGGCCAGATCGG
CAAGAACCAGATCGACGGCGCGTCGGCGCAGCAGCAGGGCGCGGACCGCGCCGAGCAGAAAGAGGACGAGAACGCGCAGC
AGACCGCGATGGCCGCGGCGAGCACGCGCGACGAAGCCGCGCATCGCAGCCGCGAAGCCGCGCAGAAGGCGATCGACGCG
GCGAAGAGCCAGGTGGCGAACGACAACGCGGTGGCCGCGCAGGTGGCCGGCAATCTGCGGACCTGA

Upstream 100 bases:

>100_bases
CGGACGCGGGCGAGATGCAGACGTCGACGGGCAAGCTGATCCTGCGTAACGCCCGCGCAGTGTAATACGGGCGATCACGT
TTGTTTACGAAGTCCAAGAG

Downstream 100 bases:

>100_bases
CGGTCCGCTTCGCGGCGGTGCGGCGGGCGTCGCCCGCCGCGCGCCGCCGCGTTTCGCGGGACGGGCGATGGCGTTTTTAT
GAAAGCCGGCGCCGATACTC

Product: translation initiation factor 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MRMSIGVQSSGMNISHAELSRLVDAGKSEQGDKAVRDDGRALARADAALAAVVGERVAARRDAVAGSGAQRVELARPKPD
AQTRATDRRTVSGLEREHKRLAASQTPRVTGMHDALVQRHVSLDGAKAAHGEGVKRAAGDAPRAAADAPQRFAFADDKAF
DAMLALGAAMQKNVQSDLAMQGKLTMLAHDAMMSAAAQDRSIGAAQMTAAIAGGALQATTSLGGAMQQMKSLSTKSMSIE
KELKPQAELKQFHAEQALELRGINKPVLSNDEVSHVKIKRDTGETVRHEIDHGGERMSDEHASVLAQEAPARQHRIDMHG
MRHEENLVKAGRQQMKGDLLQSGGQIGKNQIDGASAQQQGADRAEQKEDENAQQTAMAAASTRDEAAHRSREAAQKAIDA
AKSQVANDNAVAAQVAGNLRT

Sequences:

>Translated_421_residues
MRMSIGVQSSGMNISHAELSRLVDAGKSEQGDKAVRDDGRALARADAALAAVVGERVAARRDAVAGSGAQRVELARPKPD
AQTRATDRRTVSGLEREHKRLAASQTPRVTGMHDALVQRHVSLDGAKAAHGEGVKRAAGDAPRAAADAPQRFAFADDKAF
DAMLALGAAMQKNVQSDLAMQGKLTMLAHDAMMSAAAQDRSIGAAQMTAAIAGGALQATTSLGGAMQQMKSLSTKSMSIE
KELKPQAELKQFHAEQALELRGINKPVLSNDEVSHVKIKRDTGETVRHEIDHGGERMSDEHASVLAQEAPARQHRIDMHG
MRHEENLVKAGRQQMKGDLLQSGGQIGKNQIDGASAQQQGADRAEQKEDENAQQTAMAAASTRDEAAHRSREAAQKAIDA
AKSQVANDNAVAAQVAGNLRT
>Mature_421_residues
MRMSIGVQSSGMNISHAELSRLVDAGKSEQGDKAVRDDGRALARADAALAAVVGERVAARRDAVAGSGAQRVELARPKPD
AQTRATDRRTVSGLEREHKRLAASQTPRVTGMHDALVQRHVSLDGAKAAHGEGVKRAAGDAPRAAADAPQRFAFADDKAF
DAMLALGAAMQKNVQSDLAMQGKLTMLAHDAMMSAAAQDRSIGAAQMTAAIAGGALQATTSLGGAMQQMKSLSTKSMSIE
KELKPQAELKQFHAEQALELRGINKPVLSNDEVSHVKIKRDTGETVRHEIDHGGERMSDEHASVLAQEAPARQHRIDMHG
MRHEENLVKAGRQQMKGDLLQSGGQIGKNQIDGASAQQQGADRAEQKEDENAQQTAMAAASTRDEAAHRSREAAQKAIDA
AKSQVANDNAVAAQVAGNLRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted via the bsa type III secretion system (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the invasin protein C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005427 [H]

Pfam domain/function: PF09599 IpaC_SipC [H]

EC number: NA

Molecular weight: Translated: 44629; Mature: 44629

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSIGVQSSGMNISHAELSRLVDAGKSEQGDKAVRDDGRALARADAALAAVVGERVAAR
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RDAVAGSGAQRVELARPKPDAQTRATDRRTVSGLEREHKRLAASQTPRVTGMHDALVQRH
HHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VSLDGAKAAHGEGVKRAAGDAPRAAADAPQRFAFADDKAFDAMLALGAAMQKNVQSDLAM
HCCCCCCCCCCCCHHHHCCCCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QGKLTMLAHDAMMSAAAQDRSIGAAQMTAAIAGGALQATTSLGGAMQQMKSLSTKSMSIE
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KELKPQAELKQFHAEQALELRGINKPVLSNDEVSHVKIKRDTGETVRHEIDHGGERMSDE
HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHCCHH
HASVLAQEAPARQHRIDMHGMRHEENLVKAGRQQMKGDLLQSGGQIGKNQIDGASAQQQG
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHC
ADRAEQKEDENAQQTAMAAASTRDEAAHRSREAAQKAIDAAKSQVANDNAVAAQVAGNLR
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
T
C
>Mature Secondary Structure
MRMSIGVQSSGMNISHAELSRLVDAGKSEQGDKAVRDDGRALARADAALAAVVGERVAAR
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RDAVAGSGAQRVELARPKPDAQTRATDRRTVSGLEREHKRLAASQTPRVTGMHDALVQRH
HHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VSLDGAKAAHGEGVKRAAGDAPRAAADAPQRFAFADDKAFDAMLALGAAMQKNVQSDLAM
HCCCCCCCCCCCCHHHHCCCCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QGKLTMLAHDAMMSAAAQDRSIGAAQMTAAIAGGALQATTSLGGAMQQMKSLSTKSMSIE
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KELKPQAELKQFHAEQALELRGINKPVLSNDEVSHVKIKRDTGETVRHEIDHGGERMSDE
HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHCCHH
HASVLAQEAPARQHRIDMHGMRHEENLVKAGRQQMKGDLLQSGGQIGKNQIDGASAQQQG
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHC
ADRAEQKEDENAQQTAMAAASTRDEAAHRSREAAQKAIDAAKSQVANDNAVAAQVAGNLR
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA