| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126444697
Identifier: 126444697
GI number: 126444697
Start: 2040875
End: 2041876
Strand: Reverse
Name: 126444697
Synonym: BURPS668_A2102
Alternate gene names: NA
Gene position: 2041876-2040875 (Counterclockwise)
Preceding gene: 126442331
Following gene: 284160000
Centisome position: 65.29
GC content: 72.75
Gene sequence:
>1002_bases ATGCCTACTACCGTATCCGCACCGGAAACGCTGTCCGAAACGCGCACGCAGACCCGCGAGCTGTTGCTGCAGACTGCGCT GTCGATGCTCGAACAAGGCTGGTTTCCATCGATCACCGAGCTCGCGAACGCATCCGGCGTGTCGCGCGCCACCGCTTACC GCTACTTCCCGTCGCAGGCGGCGCTCGTGAGCACCGTCGTCGACGAGAGCCTCGGGCCGGTGCTGCAATGGCAGCCGACG TCGACATCGGTCGAGGCGCGCGTGAACGAGCTGCTCGACTTCGCGTATCCGCGCATGGAGCAGCACGAGGGCGCGTTGCG CGCCGCGCTGCAGGTGGCGCTGCATCAGTGGGCGAACGAGCGTGCGCGGCGCGCGCAGGACGAGCCGAAGTACCGGCGCG GCAACCGCCGGCGGCTGCTCACGCTCGCCGTCGAGCCGATGGTGCGGGCGGGCGTCGATCCGGCGGTGGCCGAGCGGCTC GCGCAGGCACTGTCGTTGCTCTACGGCACCGAGGCGATGGTCGTGCTGAAGGATATCTGGGGGCTCGACTTCCGGCAGTT CATGAACGTCATCAAGTGGATGAGCTCGGCGCTCGTGCGGGCGACGCTCGCACAAGCGGGCGGGGCGGCGGGAGCGGGCG GCGGCGTAGAGGCGGGGGCGGGCGGCGCTGGCGTGGCTGAAGGTGCGGCTCAAGGCGCGGCTCAAGGCGCGGCTGAAGGC ACGGCGGCGGCTGGGGGCGGCGCGGCGCAACACGCTTCGCCGGACGGCGACCCCGCCGCCGCGGGCCGCGCCGCCGCCTC GGACAGCCCCGCGGCCGGGCACGGCGACGCGCCAGCCGCGGGTGCTGCGGATGCCGCGGATCCGGCCGGCGACGCAGCCG GCGAGCGCCCCGAGGATCGCGCGTCCGCTTCGCCCACGTCTTCCATCACTTCGTCCTCTTCGTCCACTCCGTCCACTCCG TCCGCTTCGCCCGCCTCGGGCGACGACGGGCGCGATGCCTGA
Upstream 100 bases:
>100_bases CGCCAATCGTTCGTTTGTCGCACGATGTACCGCGATTCGATTCCACGGTAACTTTAACACAGATGAGACGGCCGTCTCAG CGGTCGTCCTCACAGGACAC
Downstream 100 bases:
>100_bases ATAGCCGCCTCGGTGCAGCGCCCGCCCGTCGCGGATAAGGCCGGCGGGGCGCACCGCGCATCGCCGCGCGATGCGCGGCC GCGCCGCGCGCGTCCGGTTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcriptional Regulator TetR-Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Tetr-Family Regulatory Protein
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPT STSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERL AQALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGVEAGAGGAGVAEGAAQGAAQGAAEG TAAAGGGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPAGDAAGERPEDRASASPTSSITSSSSSTPSTP SASPASGDDGRDA
Sequences:
>Translated_333_residues MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPT STSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERL AQALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGVEAGAGGAGVAEGAAQGAAQGAAEG TAAAGGGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPAGDAAGERPEDRASASPTSSITSSSSSTPSTP SASPASGDDGRDA >Mature_332_residues PTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPTS TSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLA QALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGVEAGAGGAGVAEGAAQGAAQGAAEGT AAAGGGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPAGDAAGERPEDRASASPTSSITSSSSSTPSTPS ASPASGDDGRDA
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33875; Mature: 33743
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCHH ALVSTVVDESLGPVLQWQPTSTSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANE HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLAQALSLLYGTEAMVVLKDIW HHHHCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH GLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGVEAGAGGAGVAEGAAQGAAQGAAEG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC TAAAGGGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPAGDAAGERPEDR CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ASASPTSSITSSSSSTPSTPSASPASGDDGRDA CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCHH ALVSTVVDESLGPVLQWQPTSTSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANE HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLAQALSLLYGTEAMVVLKDIW HHHHCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH GLDFRQFMNVIKWMSSALVRATLAQAGGAAGAGGGVEAGAGGAGVAEGAAQGAAQGAAEG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC TAAAGGGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPAGDAAGERPEDR CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ASASPTSSITSSSSSTPSTPSASPASGDDGRDA CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA