| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126444562
Identifier: 126444562
GI number: 126444562
Start: 2262189
End: 2262746
Strand: Reverse
Name: 126444562
Synonym: BURPS668_A2322
Alternate gene names: NA
Gene position: 2262746-2262189 (Counterclockwise)
Preceding gene: 126445534
Following gene: 126442725
Centisome position: 72.35
GC content: 72.04
Gene sequence:
>558_bases GTGGACGTGCGCGCGAGGCTCGACGACAGCCGCTTCGATGCATATCACTGGCGGATCGTCGCGCCGTGCGCGGCATACCG CGTGATGGACGGCTTCGACGTGCAGGCGACGGGCGGCGTCGCGCCCGCCGTGATCCGCGAATGGGGGATCGCGAAGGAGG CGCTGTCGCCCGCGTTCCGCGCCGGATGGTTCGGGATGCTGATCGGCTCGCTCGTGTTCAGCGCGCTCGCCGCCGTGTTC GCGGCGATTTTCATGGCCGCTTTTCCGATCGTCGGCGGACAGCCCGCGCTCAACGTGCTCGCGGCGGTCTACTATCCGGC GCCGCTGCGCTCGACGGGCATCGGCTGGCGTTCCGGCGTCGGCTGGATCGGCTCCGTCGTCGGGCCGGTGCGCGGCGGCG TGCTGATGTATCGGCAATGGTTGTCGTCGTTGCTGTTTCTCGCGGCGGCGGTGCCCGCGTGCGTGTCGATGGCGGGGATC GGCTTGACCGCGCGTCCGGGCTTCGCCGGCGCGGGCGAGGCGATCGGCGCGCGTGGCGCGGCCGCGGCGGGCGAATGA
Upstream 100 bases:
>100_bases CGGCTCGTGCTCGAACTGTAGCTGTAGCGCGAGGCCCGTCGCCCCGGCGCGGGACGGACGAAGACAACGGCATGGCGGGA GGCGACGAATGACGGCGCGA
Downstream 100 bases:
>100_bases TGTCGGCGCGGCGATGACGCAGGGGCGGGCGGCTTGCGTGGCACAGGCGGCTCCCGGGCGAGGCCGGCTTCGGCTCCGAT GCGCATTCGCGGTGTAATCG
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Transporter; 4-Hydroxybenzoate Transporter Transmembrane Protein; Protocatechuate Transmembrane Transporter
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSALAAVF AAIFMAAFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPVRGGVLMYRQWLSSLLFLAAAVPACVSMAGI GLTARPGFAGAGEAIGARGAAAAGE
Sequences:
>Translated_185_residues MDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSALAAVF AAIFMAAFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPVRGGVLMYRQWLSSLLFLAAAVPACVSMAGI GLTARPGFAGAGEAIGARGAAAAGE >Mature_185_residues MDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSALAAVF AAIFMAAFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPVRGGVLMYRQWLSSLLFLAAAVPACVSMAGI GLTARPGFAGAGEAIGARGAAAAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19119; Mature: 19119
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALSPAFR CCCCCCCCCCCCCHHHHEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHH AGWFGMLIGSLVFSALAAVFAAIFMAAFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH GWIGSVVGPVRGGVLMYRQWLSSLLFLAAAVPACVSMAGIGLTARPGFAGAGEAIGARGA HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC AAAGE CCCCC >Mature Secondary Structure MDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGVAPAVIREWGIAKEALSPAFR CCCCCCCCCCCCCHHHHEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHH AGWFGMLIGSLVFSALAAVFAAIFMAAFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH GWIGSVVGPVRGGVLMYRQWLSSLLFLAAAVPACVSMAGIGLTARPGFAGAGEAIGARGA HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC AAAGE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA