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The map label for this gene is 126444561

Identifier: 126444561

GI number: 126444561

Start: 98908

End: 99243

Strand: Reverse

Name: 126444561

Synonym: BURPS668_A0115

Alternate gene names: NA

Gene position: 99243-98908 (Counterclockwise)

Preceding gene: 126443549

Following gene: 126442620

Centisome position: 3.17

GC content: 54.76

Gene sequence:

>336_bases
ATGTTGCGACGATCAGTTAAATCCGCCCAATACGTCAGTATTAGGTATATCGAACGTTTGGCCGAGGCGGGTATCGAGCC
GTCCGTTGGCAGCCGTGGCGACAGCTACGATAGCGCGCTGGCTGAAACGATCAACGGTTTGAACAAGACGGAACTGATTT
ATCGGCGCGCCCCGTGGAAAACAAGAGAATCCGTCGAGCTGGCAACGCTAGGATGGGTCGCCTCGTACAACCATCATCGG
CTGATGGAACCGCTCGGCTATATCCCGCTCGCTGAGGCTGAGGCAAACTACTACAGGCAACTCAGCACTGCCGCTGAACT
GCCTGCATTAACTTAA

Upstream 100 bases:

>100_bases
TGATTGACACCCGGTCTGCCAGGTGAACGCATGGCGGGCCTTCCCGTTTGTTCCGAGCCCCATCCCAGTGGTCGCCCCAT
TCAATACATCCAACCTGGAG

Downstream 100 bases:

>100_bases
ACCAACCAGCCTCCACGATTCCGGTGCGGTTCAGTTATTTCTATTGGCTGGCTTTCGAGCCGCTTTTTCACGATGCCTGC
CGGATCAAGCAACGAATTTG

Product: ISBt3 transposase subunit protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLRRSVKSAQYVSIRYIERLAEAGIEPSVGSRGDSYDSALAETINGLNKTELIYRRAPWKTRESVELATLGWVASYNHHR
LMEPLGYIPLAEAEANYYRQLSTAAELPALT

Sequences:

>Translated_111_residues
MLRRSVKSAQYVSIRYIERLAEAGIEPSVGSRGDSYDSALAETINGLNKTELIYRRAPWKTRESVELATLGWVASYNHHR
LMEPLGYIPLAEAEANYYRQLSTAAELPALT
>Mature_111_residues
MLRRSVKSAQYVSIRYIERLAEAGIEPSVGSRGDSYDSALAETINGLNKTELIYRRAPWKTRESVELATLGWVASYNHHR
LMEPLGYIPLAEAEANYYRQLSTAAELPALT

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=66, Percent_Identity=53.030303030303, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 12488; Mature: 12488

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRSVKSAQYVSIRYIERLAEAGIEPSVGSRGDSYDSALAETINGLNKTELIYRRAPWK
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHEEECCCCC
TRESVELATLGWVASYNHHRLMEPLGYIPLAEAEANYYRQLSTAAELPALT
CCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLRRSVKSAQYVSIRYIERLAEAGIEPSVGSRGDSYDSALAETINGLNKTELIYRRAPWK
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHEEECCCCC
TRESVELATLGWVASYNHHRLMEPLGYIPLAEAEANYYRQLSTAAELPALT
CCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]