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The map label for this gene is 126444536

Identifier: 126444536

GI number: 126444536

Start: 580933

End: 581679

Strand: Reverse

Name: 126444536

Synonym: BURPS668_A0619

Alternate gene names: NA

Gene position: 581679-580933 (Counterclockwise)

Preceding gene: 126443797

Following gene: 126442436

Centisome position: 18.6

GC content: 71.35

Gene sequence:

>747_bases
ATGCAGGTTTCGAATTCCCTGCCGGGCGCATCCGCGCCGGCCTTCTCCCGTATGAATCCCCGCATCGTCACCGCTGCCGT
GACGGTTCTCGCCGGACACGCGCTCCTGCTGACCGGCGCGCTGCTGATGCGCAACGACGTGCCGCACCGTCCGCTCGAAT
CGAAGACGATCACCGCTCAGTTGCTGAGCGCGCCCGTCGCGCAGCCGGCCGGCATCCAGTCGGCGCCCGCGCCCACGCCG
CCCCAGCCCGTTCCGAAGGCCAAGCCGAAGCCGGCGCCGGCGCCCGTCCCCCGGCCCGTCGCGAAGCCGAGCCCGACGCC
ACTGCCCGTCACGCACGAGCCCGCGCCGAATGCGATCACCGCGCCGGAACCCGCGCCTGCCGCGCCCGTGGCGCCGGCCG
AAACGAGCGCGAAGGCCGCGCCGCCCGCGGGCGCACCGACGAACCGCCCGACGATGGAAATCGTCGCGCCGAAGGAAGGC
GCACACCTGAGCTGCCAGATCGCGAAGGCCGCCTATCCGTCGATGTCGAAGCGGCGCGGCGAAACGGGGGTCGTGAAGGT
CCGCTTCGTCGTCGGCCTGACGGGCAAGATCGAGAGCGCGCAGGTCGTCCAGAGCAGCGGCTTCGCGCGTCTGGACGATG
CCGCGCTCGACGCGATCCGCTCGTCGCCGTGCCAGCCGTATCTGCAGAACGGGCAGCCGATGCGCGCCGCCTACACGCAG
CCTTATGACTTCACTCTGACCGATTAA

Upstream 100 bases:

>100_bases
CGGATTCGTGACTACCGTGTGCATCTCGTTGCTGATTTTCCGCAAGTGATGCAGCACTTCGCGGCGCGCCTCGCGCACGC
CGCCGCGCTACGAAGCTAAC

Downstream 100 bases:

>100_bases
TCTCGGCAATACCGAAAGAAACAACAAGGAAAGGAAATGCAAAGCTACGGAATCGCGCACGTGTGGGCGCAAGGTGACTT
CGTTACGCGCTTCATCGCGA

Product: TonB domain-containing protein

Products: NA

Alternate protein names: NB Protein; NB Domain Protein; NB-Like Protein; NB Like Protein; Periplasmic Protein nB

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTP
PQPVPKAKPKPAPAPVPRPVAKPSPTPLPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEG
AHLSCQIAKAAYPSMSKRRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQ
PYDFTLTD

Sequences:

>Translated_248_residues
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTP
PQPVPKAKPKPAPAPVPRPVAKPSPTPLPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEG
AHLSCQIAKAAYPSMSKRRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQ
PYDFTLTD
>Mature_248_residues
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQLLSAPVAQPAGIQSAPAPTP
PQPVPKAKPKPAPAPVPRPVAKPSPTPLPVTHEPAPNAITAPEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEG
AHLSCQIAKAAYPSMSKRRGETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQ
PYDFTLTD

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25569; Mature: 25569

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQ
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LLSAPVAQPAGIQSAPAPTPPQPVPKAKPKPAPAPVPRPVAKPSPTPLPVTHEPAPNAIT
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSKRRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHCCCHHHHCC
ETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQ
CCCEEEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
PYDFTLTD
CCEEEECC
>Mature Secondary Structure
MQVSNSLPGASAPAFSRMNPRIVTAAVTVLAGHALLLTGALLMRNDVPHRPLESKTITAQ
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LLSAPVAQPAGIQSAPAPTPPQPVPKAKPKPAPAPVPRPVAKPSPTPLPVTHEPAPNAIT
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APEPAPAAPVAPAETSAKAAPPAGAPTNRPTMEIVAPKEGAHLSCQIAKAAYPSMSKRRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHCCCHHHHCC
ETGVVKVRFVVGLTGKIESAQVVQSSGFARLDDAALDAIRSSPCQPYLQNGQPMRAAYTQ
CCCEEEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
PYDFTLTD
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA