| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is dbpA [H]
Identifier: 126444520
GI number: 126444520
Start: 258739
End: 260136
Strand: Reverse
Name: dbpA [H]
Synonym: BURPS668_A0291
Alternate gene names: 126444520
Gene position: 260136-258739 (Counterclockwise)
Preceding gene: 126445221
Following gene: 126444776
Centisome position: 8.32
GC content: 68.74
Gene sequence:
>1398_bases ATGACCTACCCCCCCACCGCCACGCCGTTCAGCGCGCTGGCGCTGACGCCCGCGACGCTCGCGAATCTCGCGCAGCTCGG CTACACCGACATGACGCCGATCCAGGCCGCGAGCCTGCCGATCGCGCTCGCCGGCCACGACCTGATCGCGCAGGCGAAAA CCGGCAGCGGCAAGACGGCCGCGTTCTCGCTCGCGCTGCTCGCACGCATCGACGCGCGCCGCTTCGACGTGCAGGCGCTG GTGCTGTGCCCGACGCGCGAACTGGCCGACCAGGTCGCGCAGGAAATCCGCCGCCTCGCGCGCGCGGAGGAGAACGTCAA GGTGCTGACGCTGTGCGGCGGCACGCCGATGCGCCCTCAAACGCAGAGCCTCGAACACGGCGCGCACATCATCGTCGGCA CGCCGGGGCGCATCATGGATCATCTGGACCGCGGCCATCTGACGCTCGACGCGCTGAACACGCTCGTGCTCGACGAAGCG GACCGGATGCTCGACATGGGTTTCTTCGACGACATCGCGAAGGTGGCGCGGCAATGCCCGCCGACGCGCCAGACGCTGCT GTTCTCCGCCACGTATCCGGACGGGATCGCGAAGCTCAGCCAGCAGTTCCTGCGCCATCCGAAGAGGGTGAAGCTCGAGG AACGCCACGACGACAGCAAGATCCGCCAGCGCTTCTACGAAGTGACCGAGGACGAGCGGCTGCATGCGGTCGGCCTGTTG CTGAACCACTATCGCCCGGTGAGCACGATCGCGTTCTGCAACACGAAGCAGCAATGCCGCGATCTGCTCGACGTGCTGCA TGCGCAGGGTTTCCACGCGCTCGCGCTGCACGGCGAGCTCGAGCAGCGCGAGCGCGACCAGGTGCTGATCCGGTTCGCGA ACCGCAGTTGCTCGGTGCTCGTCGCGACCGACGTCGCCGCGCGCGGCCTCGACATCGCGCAGCTCGAGGCGGTGATCAAC GTCGACGTGACGCCCGACCCGGAAGTGTACGTGCACCGCATCGGCCGCACGGGCCGCGCCGACCAGGACGGCTGGGCGCT GAGCCTCGCGAGCATGAACGAGATGGGCCGCGTGGGCGGCATCGAGCAGGCGCTCGCGCGCGAAGTCGAATGGCATCCGC TCGCCGAATTGAAGGCCGGCGGCGACGCGCCGCTACTGCCGCCGATGGAGACGCTGCAGATTCTCGGCGGCCGCAAGGAC AAGATTCGCCCCGGCGACGTGCTGGGCGCGCTGACGGGCGACGCGGGCTTCAGCGGCGCGCAGATCGGCAAGATCAACGT GACCGAGTTCTCGACCTATGTGGCGGTGGAACGCGGCATCGCGCGCGACGCGCTGCGCAAGCTCAACGCGGGCAAGATCA AGGGCAAGCGGGTGAAGGTGCGGCTGATGGACGAATGA
Upstream 100 bases:
>100_bases CCGGTGCCGCCTGCCGCGCGAGCGATCTCCACGGCCGGTTCGTCAAGGGAATGTACGATACGCTCCTTTGCCATCCGTCA ACCGACCCGAGTTCAACGCC
Downstream 100 bases:
>100_bases CGCGCGGGGGCGCGCTGCACGGGCGTCGAATAGGCGTCACGCCGCGGCGCGCCGGGCCAGCCGGCCGGCCGACATCGCCG AATACCATCCAATACCGCCG
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARIDARRFDVQAL VLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQTQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEA DRMLDMGFFDDIAKVARQCPPTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVLVATDVAARGLDIAQLEAVIN VDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGGIEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKD KIRPGDVLGALTGDAGFSGAQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLMDE
Sequences:
>Translated_465_residues MTYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARIDARRFDVQAL VLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQTQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEA DRMLDMGFFDDIAKVARQCPPTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVLVATDVAARGLDIAQLEAVIN VDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGGIEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKD KIRPGDVLGALTGDAGFSGAQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLMDE >Mature_464_residues TYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARIDARRFDVQALV LCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQTQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEAD RMLDMGFFDDIAKVARQCPPTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLLL NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVLVATDVAARGLDIAQLEAVINV DVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGGIEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKDK IRPGDVLGALTGDAGFSGAQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLMDE
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=34.0659340659341, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=38.5269121813031, Blast_Score=232, Evalue=7e-61, Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=38.1868131868132, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=38.1868131868132, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI148613856, Length=332, Percent_Identity=39.4578313253012, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI38201710, Length=332, Percent_Identity=39.4578313253012, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI262118318, Length=362, Percent_Identity=38.6740331491713, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=33.7801608579088, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI262231852, Length=362, Percent_Identity=38.6740331491713, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI216548263, Length=362, Percent_Identity=38.6740331491713, Blast_Score=224, Evalue=9e-59, Organism=Homo sapiens, GI13518015, Length=362, Percent_Identity=38.6740331491713, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI87196351, Length=370, Percent_Identity=38.6486486486486, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI301171475, Length=370, Percent_Identity=38.6486486486486, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI301171467, Length=370, Percent_Identity=38.6486486486486, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=37.7659574468085, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=37.7659574468085, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI20149629, Length=366, Percent_Identity=34.6994535519126, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI41327773, Length=372, Percent_Identity=36.5591397849462, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI31542656, Length=381, Percent_Identity=35.1706036745407, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI224593278, Length=353, Percent_Identity=37.9603399433428, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI41327771, Length=426, Percent_Identity=32.8638497652582, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI13129006, Length=375, Percent_Identity=35.4666666666667, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI50659095, Length=371, Percent_Identity=35.5795148247978, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=35.5013550135501, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI83700235, Length=328, Percent_Identity=36.280487804878, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=35.2777777777778, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=35.3760445682451, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI188035877, Length=359, Percent_Identity=33.1476323119777, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=31.5340909090909, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=30.9659090909091, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=30.9659090909091, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI51094101, Length=354, Percent_Identity=33.6158192090396, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI164419743, Length=354, Percent_Identity=33.6158192090396, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI256223453, Length=340, Percent_Identity=31.4705882352941, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI13514831, Length=383, Percent_Identity=34.4647519582245, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI38327634, Length=388, Percent_Identity=31.4432989690722, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI55749865, Length=372, Percent_Identity=31.4516129032258, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=32.1899736147757, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=31.9261213720317, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI41327776, Length=365, Percent_Identity=31.7808219178082, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI164419732, Length=359, Percent_Identity=33.4261838440111, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI41327779, Length=404, Percent_Identity=31.6831683168317, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI62241022, Length=358, Percent_Identity=31.8435754189944, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=31.5789473684211, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI62241024, Length=337, Percent_Identity=32.3442136498516, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI17505907, Length=418, Percent_Identity=29.4258373205742, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=32.7327327327327, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI9966805, Length=341, Percent_Identity=31.9648093841642, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI38569503, Length=339, Percent_Identity=28.023598820059, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI38569505, Length=339, Percent_Identity=28.023598820059, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI154759257, Length=448, Percent_Identity=28.5714285714286, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI256773275, Length=369, Percent_Identity=28.7262872628726, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI20336298, Length=225, Percent_Identity=33.7777777777778, Blast_Score=115, Evalue=1e-25, Organism=Escherichia coli, GI1787605, Length=458, Percent_Identity=55.2401746724891, Blast_Score=470, Evalue=1e-134, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=41.3793103448276, Blast_Score=259, Evalue=3e-70, Organism=Escherichia coli, GI1787016, Length=367, Percent_Identity=39.7820163487738, Blast_Score=255, Evalue=4e-69, Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=36.3636363636364, Blast_Score=222, Evalue=3e-59, Organism=Escherichia coli, GI1788930, Length=388, Percent_Identity=35.8247422680412, Blast_Score=185, Evalue=6e-48, Organism=Caenorhabditis elegans, GI71987143, Length=376, Percent_Identity=35.9042553191489, Blast_Score=244, Evalue=9e-65, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=34.4173441734417, Blast_Score=231, Evalue=5e-61, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=34.4173441734417, Blast_Score=231, Evalue=5e-61, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=38.8586956521739, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=39.2265193370166, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=38.8586956521739, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI115533224, Length=346, Percent_Identity=40.1734104046243, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=35.7723577235772, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17552114, Length=364, Percent_Identity=32.4175824175824, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17510559, Length=392, Percent_Identity=35.4591836734694, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI71995718, Length=370, Percent_Identity=38.3783783783784, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI32565321, Length=402, Percent_Identity=33.8308457711443, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=37.027027027027, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17552642, Length=372, Percent_Identity=35.4838709677419, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=36.8983957219251, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI86570094, Length=338, Percent_Identity=39.0532544378698, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71999646, Length=351, Percent_Identity=32.7635327635328, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=32.9842931937173, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI71999644, Length=351, Percent_Identity=32.7635327635328, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=31.1170212765957, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI115532548, Length=376, Percent_Identity=31.1170212765957, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17509811, Length=386, Percent_Identity=32.6424870466321, Blast_Score=191, Evalue=5e-49, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=30.3977272727273, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17507945, Length=379, Percent_Identity=35.0923482849604, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17507881, Length=381, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17505370, Length=393, Percent_Identity=31.0432569974555, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=30.4347826086957, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=32.3684210526316, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17536099, Length=393, Percent_Identity=31.2977099236641, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17536103, Length=368, Percent_Identity=32.6086956521739, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17553716, Length=372, Percent_Identity=28.7634408602151, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI193208216, Length=376, Percent_Identity=31.6489361702128, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI25148203, Length=420, Percent_Identity=25.2380952380952, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17508543, Length=384, Percent_Identity=29.1666666666667, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=31.7204301075269, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=30.3108808290155, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=30.9139784946237, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17556951, Length=352, Percent_Identity=28.4090909090909, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=31.8407960199005, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI25148291, Length=402, Percent_Identity=28.3582089552239, Blast_Score=121, Evalue=9e-28, Organism=Caenorhabditis elegans, GI25148205, Length=336, Percent_Identity=25.297619047619, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=37.8640776699029, Blast_Score=83, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=37.465564738292, Blast_Score=236, Evalue=7e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=392, Percent_Identity=35.4591836734694, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=33.8888888888889, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=38.2978723404255, Blast_Score=223, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=37.7410468319559, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6324778, Length=382, Percent_Identity=37.17277486911, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=32.7176781002639, Blast_Score=213, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6321360, Length=370, Percent_Identity=36.4864864864865, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6322912, Length=375, Percent_Identity=33.6, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6322323, Length=375, Percent_Identity=33.6, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=32.4022346368715, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=371, Percent_Identity=33.4231805929919, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=357, Percent_Identity=29.9719887955182, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=34.4, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=391, Percent_Identity=30.690537084399, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6319714, Length=440, Percent_Identity=28.6363636363636, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=391, Percent_Identity=29.923273657289, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=30.5630026809651, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=434, Percent_Identity=29.2626728110599, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=423, Percent_Identity=28.1323877068558, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=393, Percent_Identity=28.2442748091603, Blast_Score=156, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=341, Percent_Identity=30.2052785923754, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6323306, Length=425, Percent_Identity=27.2941176470588, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=497, Percent_Identity=25.5533199195171, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=24.7126436781609, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6321374, Length=407, Percent_Identity=22.1130221130221, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI18857967, Length=356, Percent_Identity=37.9213483146067, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=40.625, Blast_Score=231, Evalue=7e-61, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=38.135593220339, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=34.9593495934959, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI17985987, Length=381, Percent_Identity=38.8451443569554, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI281361218, Length=365, Percent_Identity=37.2602739726027, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644481, Length=365, Percent_Identity=37.2602739726027, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644483, Length=365, Percent_Identity=37.2602739726027, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644487, Length=365, Percent_Identity=37.2602739726027, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI45551833, Length=365, Percent_Identity=37.2602739726027, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644485, Length=365, Percent_Identity=37.2602739726027, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=37.3626373626374, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24662330, Length=360, Percent_Identity=37.2222222222222, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=36.6391184573003, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=32.967032967033, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=32.967032967033, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI17136814, Length=380, Percent_Identity=37.3684210526316, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=37.465564738292, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24582080, Length=377, Percent_Identity=35.0132625994695, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI24582078, Length=377, Percent_Identity=35.0132625994695, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI17136248, Length=377, Percent_Identity=35.0132625994695, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI24582075, Length=377, Percent_Identity=35.0132625994695, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI24585582, Length=369, Percent_Identity=33.8753387533875, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24642151, Length=373, Percent_Identity=35.3887399463807, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=32.8804347826087, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI17977678, Length=363, Percent_Identity=35.8126721763085, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24584994, Length=406, Percent_Identity=32.7586206896552, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI281365720, Length=320, Percent_Identity=38.75, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI28571808, Length=385, Percent_Identity=31.1688311688312, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI28571809, Length=385, Percent_Identity=31.1688311688312, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=31.728045325779, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=31.728045325779, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=31.728045325779, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI17647335, Length=374, Percent_Identity=30.2139037433155, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI21355559, Length=358, Percent_Identity=33.7988826815642, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI24642822, Length=371, Percent_Identity=29.3800539083558, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=29.2620865139949, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24666101, Length=377, Percent_Identity=30.5039787798408, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=31.9018404907975, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI19920478, Length=385, Percent_Identity=28.8311688311688, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI20130173, Length=361, Percent_Identity=28.5318559556787, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI28571338, Length=221, Percent_Identity=32.1266968325792, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI18859659, Length=221, Percent_Identity=32.1266968325792, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI17136666, Length=445, Percent_Identity=26.0674157303371, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=23.5795454545455, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50959; Mature: 50828
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS01070 NUCLEASE_NON_SPEC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA CCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHEEECCCCCCCHH AFSLALLARIDARRFDVQALVLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQ HHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC TQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEADRMLDMGFFDDIAKVARQCP CHHHCCCCEEEEECCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHH LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVL HHCCCCHHHEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEECCCCCEEE VATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGG EEECHHHCCCCHHHEEEEEEECCCCCCHHHHEECCCCCCCCCCCCEEEEHHHHHHHHCCC IEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFSGA HHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC QIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLMDE EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure TYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA CCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHEEECCCCCCCHH AFSLALLARIDARRFDVQALVLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQ HHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC TQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEADRMLDMGFFDDIAKVARQCP CHHHCCCCEEEEECCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHH LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVL HHCCCCHHHEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEECCCCCEEE VATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGG EEECHHHCCCCHHHEEEEEEECCCCCCHHHHEECCCCCCCCCCCCEEEEHHHHHHHHCCC IEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFSGA HHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC QIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLMDE EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]