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The map label for this gene is 126444516

Identifier: 126444516

GI number: 126444516

Start: 473675

End: 474574

Strand: Reverse

Name: 126444516

Synonym: BURPS668_A0521

Alternate gene names: NA

Gene position: 474574-473675 (Counterclockwise)

Preceding gene: 126442476

Following gene: 126443644

Centisome position: 15.17

GC content: 69.89

Gene sequence:

>900_bases
ATGGCTTCGTTGATTCTCGTTCTCGCCTGCCTCGTCGCGGGCGCCGCGCTTGCGCGCAGCAAGCGCCTGCCGGCCAATTT
CCCGGCCAGTCTCAATTACTTCGTGATCCAGATTTCGTTGCCCGCGCTCGTGCTGCAGCACCTGCACCGAATCGCGTTCG
GCGCGGACGTGGTGTGGCTGTTCGCGACGCCCGCGATCGTGTTCGCGGCCACCGCCGCGCTCGCGCTCGCCGCCGGCGCG
CTGCTGCGCCTGGACAAAGCGACGGTCGGCTGCCTCACGCTCGTGTGCGGCACGAGCAATACGTCGATCGTCGGCGTGCC
GGTCGTGCAGGCGCTGATCGGAAGCGCCGCGGTCGGCCACGCGCTCGTCGTCGATCAGGCGAACTTCATCGTGATGTGCA
CGGCGGGCCTCGTCGCCGCCGATCTGTACGCGGGCGGCGCGACGCGCTGGCGCGGCGTCGCGCGGCAACTTGCCGGCTAC
CGGCCGATTCAGGCGATGGCGCTTGCGCTGCTGTTGCGGCCGGTGCCGTTTGCACCCGTCGTCGAGGACGTGCTGGCCCT
GCTCGGCGCGACGCTCACGCCGATCGCGATGATCTCCGTGGGGGCGAGCTTCAGCGTGCGCCACGCGCGCGACGCCGCGC
GCAATTTCCTGGTCGGCATCGGCCTGAAGTTGCTCGTCGTGCCGGCGATCGTGCTCGCATGCGGGCTCTACGTGTTCTCG
CAGCAGGGCGTGCCGCTCGCCGTCGCGCTCGTGCAGGCGACGATGCCGCCGATGATCATCGCAGGGCTCATCGCGATCGA
CAAGAAGCTCGATCCGCCGCTCGCGGGCGCGCTGATGACGCTGGGCGTGCCGGTGTCGATCGCCGCCGCCTGGCTATGGC
GCGGCGTGCTGCCTTATTGA

Upstream 100 bases:

>100_bases
CGGTCCGTCGCGTGCGCGCCGGACCCGCCGATTTTCGACACCAACCCGCACGGGCCGCCCGCCGGGCCGCCCTGCATCCG
ATTCGTTCAAACGCCGATCG

Downstream 100 bases:

>100_bases
CAAGCAGCACGAAACGATCGCGCCGATGGCTTCGCAATGCGAATTGTTTCCGCCGCGGCCCATCGCCCATCGCGAATGCC
CGCGCATGAGCCGCGCCGCG

Product: auxin efflux carrier family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MASLILVLACLVAGAALARSKRLPANFPASLNYFVIQISLPALVLQHLHRIAFGADVVWLFATPAIVFAATAALALAAGA
LLRLDKATVGCLTLVCGTSNTSIVGVPVVQALIGSAAVGHALVVDQANFIVMCTAGLVAADLYAGGATRWRGVARQLAGY
RPIQAMALALLLRPVPFAPVVEDVLALLGATLTPIAMISVGASFSVRHARDAARNFLVGIGLKLLVVPAIVLACGLYVFS
QQGVPLAVALVQATMPPMIIAGLIAIDKKLDPPLAGALMTLGVPVSIAAAWLWRGVLPY

Sequences:

>Translated_299_residues
MASLILVLACLVAGAALARSKRLPANFPASLNYFVIQISLPALVLQHLHRIAFGADVVWLFATPAIVFAATAALALAAGA
LLRLDKATVGCLTLVCGTSNTSIVGVPVVQALIGSAAVGHALVVDQANFIVMCTAGLVAADLYAGGATRWRGVARQLAGY
RPIQAMALALLLRPVPFAPVVEDVLALLGATLTPIAMISVGASFSVRHARDAARNFLVGIGLKLLVVPAIVLACGLYVFS
QQGVPLAVALVQATMPPMIIAGLIAIDKKLDPPLAGALMTLGVPVSIAAAWLWRGVLPY
>Mature_298_residues
ASLILVLACLVAGAALARSKRLPANFPASLNYFVIQISLPALVLQHLHRIAFGADVVWLFATPAIVFAATAALALAAGAL
LRLDKATVGCLTLVCGTSNTSIVGVPVVQALIGSAAVGHALVVDQANFIVMCTAGLVAADLYAGGATRWRGVARQLAGYR
PIQAMALALLLRPVPFAPVVEDVLALLGATLTPIAMISVGASFSVRHARDAARNFLVGIGLKLLVVPAIVLACGLYVFSQ
QGVPLAVALVQATMPPMIIAGLIAIDKKLDPPLAGALMTLGVPVSIAAAWLWRGVLPY

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 30772; Mature: 30641

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLILVLACLVAGAALARSKRLPANFPASLNYFVIQISLPALVLQHLHRIAFGADVVWL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHH
FATPAIVFAATAALALAAGALLRLDKATVGCLTLVCGTSNTSIVGVPVVQALIGSAAVGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHCC
ALVVDQANFIVMCTAGLVAADLYAGGATRWRGVARQLAGYRPIQAMALALLLRPVPFAPV
EEEEECCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHH
VEDVLALLGATLTPIAMISVGASFSVRHARDAARNFLVGIGLKLLVVPAIVLACGLYVFS
HHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QQGVPLAVALVQATMPPMIIAGLIAIDKKLDPPLAGALMTLGVPVSIAAAWLWRGVLPY
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASLILVLACLVAGAALARSKRLPANFPASLNYFVIQISLPALVLQHLHRIAFGADVVWL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHH
FATPAIVFAATAALALAAGALLRLDKATVGCLTLVCGTSNTSIVGVPVVQALIGSAAVGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHCC
ALVVDQANFIVMCTAGLVAADLYAGGATRWRGVARQLAGYRPIQAMALALLLRPVPFAPV
EEEEECCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHH
VEDVLALLGATLTPIAMISVGASFSVRHARDAARNFLVGIGLKLLVVPAIVLACGLYVFS
HHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QQGVPLAVALVQATMPPMIIAGLIAIDKKLDPPLAGALMTLGVPVSIAAAWLWRGVLPY
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]