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The map label for this gene is yfgF [C]

Identifier: 126444316

GI number: 126444316

Start: 1115693

End: 1116913

Strand: Reverse

Name: yfgF [C]

Synonym: BURPS668_A1174

Alternate gene names: 126444316

Gene position: 1116913-1115693 (Counterclockwise)

Preceding gene: 126443874

Following gene: 126444400

Centisome position: 35.71

GC content: 67.24

Gene sequence:

>1221_bases
ATGGAACAATTCCCGACATCATCGACGAATCCTGAAAGCGCGCGACCGAATGCGCAAATCAGGATCATGGTCGAATTGCA
GAATCATTCGCATCTCTGCGCCGCCTACGGGAAGCGGTTCGGCGTCGAGGCCATGCGCAAGCTGGGGTGGCGCGCCTATC
GCTGGGGCGGCTCCGGCATGATTCTCACCGCCATCGGCGATAACCGCTTTATCGTCGCCCTGCCCGCCCGCGATTCGTCG
CCGCGCACCGCGGAGCGGCCCGTGGCCGAATCCTGCCTGCTCGCGCTCTCGGGCACGCCCATTTCCCATGGCGGCGTGCA
TGCGCTGGCGGTGGTCGACGTCCACGCGATCGACGCCGAATCCGGTCAAGGATCGAACCGCACGCGCGAGCCCGCCGACC
AGCTCGGGCCGGTTCCGCCCGCGCAACACACCGCGGGCTGGCGAAGTCAATACATGAGCGACATGCACGCCGCGGTCGCC
TTTCGCCAAAGCCTGCGCTCGAATCTTTCGTACCTGTCCTTTCAGCCCATCGTCCGGCGAAACAGCGCCCCGGCCGTGCT
GTACGAGCAAGCCCTGCTCAGCATCGTCGGCGACGACGATCAATCGGGAGAGCACCCCGCAAGCATCGTTGCCGCATTGG
AGCGGCTCGGGCTCGCCCGCCTGTTCGATTACCGCGTGGTGCACGCCGTCGTCGCCCGACTGCTGCGCACCTCCGACGCG
CGCCTCGGCTGCCGGATCTCGCCGCGCAGCGCGATGCTCGACGTGTGGTGGGCTTCGCTCGTGGACTGGCTCGCGTCCCA
TCCGTGCGTCGCCCGCCGCTTCACCGTCGAGATTCCGTGCAATACGACGGTCACCCGCCGGGCCGCGGCGCTTGCGTTCG
TTCGCAAACTGCAGACGCTGGGCTGCAGTGTCGCCGTGACGGATTTCGATACCGGCGGCTGCAGCCTCGAGTTCGCGCTG
CTCGCCAGGCCGCAGGTCGTCAAGATCAGCGCCGGCGCGCTGCGCGCCTTGCCTGCCGGCAACAGCCTGGCGGAACGTCT
CGCGCGGCTGGTTCGGCCCTGTTCGTCGTTCGATCCGCAAATCGTCGTCGAAGGCGTGAACGATCCGCACGACCTGAACG
TGCTCGAAGCCGTCGACGCGGCATGGGTGCAAGGCTTGCTGCAAAGCGCGGCCGTCAATGGAAGCCGCGCCGAGCCGCTC
GTCGTGTGGCAGGACCAGTAG

Upstream 100 bases:

>100_bases
ATTGAAAATAGCACCCTCATGATTTTAACGCGCCCGATTCACCGTCAAATTAGATCATCGCATTCGATAATATTCGAAAC
GAATTCCGGCCCCGTCTCAT

Downstream 100 bases:

>100_bases
CGTGTTTCGTGGCGCGTGCGCGATCCGCGCAGGAACGCGACGTCGCCATCGGGAGGTTTCATGAGTGGTGAAAAAACGCC
GACTCGCCGCGTTCTGGCGG

Product: FOG EAL domain-containing protein

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; Diguanylate Cyclase; EAL Domain-Containing Protein; GGDEF Domain-Containing Protein

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MEQFPTSSTNPESARPNAQIRIMVELQNHSHLCAAYGKRFGVEAMRKLGWRAYRWGGSGMILTAIGDNRFIVALPARDSS
PRTAERPVAESCLLALSGTPISHGGVHALAVVDVHAIDAESGQGSNRTREPADQLGPVPPAQHTAGWRSQYMSDMHAAVA
FRQSLRSNLSYLSFQPIVRRNSAPAVLYEQALLSIVGDDDQSGEHPASIVAALERLGLARLFDYRVVHAVVARLLRTSDA
RLGCRISPRSAMLDVWWASLVDWLASHPCVARRFTVEIPCNTTVTRRAAALAFVRKLQTLGCSVAVTDFDTGGCSLEFAL
LARPQVVKISAGALRALPAGNSLAERLARLVRPCSSFDPQIVVEGVNDPHDLNVLEAVDAAWVQGLLQSAAVNGSRAEPL
VVWQDQ

Sequences:

>Translated_406_residues
MEQFPTSSTNPESARPNAQIRIMVELQNHSHLCAAYGKRFGVEAMRKLGWRAYRWGGSGMILTAIGDNRFIVALPARDSS
PRTAERPVAESCLLALSGTPISHGGVHALAVVDVHAIDAESGQGSNRTREPADQLGPVPPAQHTAGWRSQYMSDMHAAVA
FRQSLRSNLSYLSFQPIVRRNSAPAVLYEQALLSIVGDDDQSGEHPASIVAALERLGLARLFDYRVVHAVVARLLRTSDA
RLGCRISPRSAMLDVWWASLVDWLASHPCVARRFTVEIPCNTTVTRRAAALAFVRKLQTLGCSVAVTDFDTGGCSLEFAL
LARPQVVKISAGALRALPAGNSLAERLARLVRPCSSFDPQIVVEGVNDPHDLNVLEAVDAAWVQGLLQSAAVNGSRAEPL
VVWQDQ
>Mature_406_residues
MEQFPTSSTNPESARPNAQIRIMVELQNHSHLCAAYGKRFGVEAMRKLGWRAYRWGGSGMILTAIGDNRFIVALPARDSS
PRTAERPVAESCLLALSGTPISHGGVHALAVVDVHAIDAESGQGSNRTREPADQLGPVPPAQHTAGWRSQYMSDMHAAVA
FRQSLRSNLSYLSFQPIVRRNSAPAVLYEQALLSIVGDDDQSGEHPASIVAALERLGLARLFDYRVVHAVVARLLRTSDA
RLGCRISPRSAMLDVWWASLVDWLASHPCVARRFTVEIPCNTTVTRRAAALAFVRKLQTLGCSVAVTDFDTGGCSLEFAL
LARPQVVKISAGALRALPAGNSLAERLARLVRPCSSFDPQIVVEGVNDPHDLNVLEAVDAAWVQGLLQSAAVNGSRAEPL
VVWQDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43961; Mature: 43961

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQFPTSSTNPESARPNAQIRIMVELQNHSHLCAAYGKRFGVEAMRKLGWRAYRWGGSGM
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHCCCEEEEECCCCE
ILTAIGDNRFIVALPARDSSPRTAERPVAESCLLALSGTPISHGGVHALAVVDVHAIDAE
EEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCC
SGQGSNRTREPADQLGPVPPAQHTAGWRSQYMSDMHAAVAFRQSLRSNLSYLSFQPIVRR
CCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHC
NSAPAVLYEQALLSIVGDDDQSGEHPASIVAALERLGLARLFDYRVVHAVVARLLRTSDA
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLGCRISPRSAMLDVWWASLVDWLASHPCVARRFTVEIPCNTTVTRRAAALAFVRKLQTL
CCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC
GCSVAVTDFDTGGCSLEFALLARPQVVKISAGALRALPAGNSLAERLARLVRPCSSFDPQ
CCEEEEEECCCCCCEEEEEEECCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCE
IVVEGVNDPHDLNVLEAVDAAWVQGLLQSAAVNGSRAEPLVVWQDQ
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure
MEQFPTSSTNPESARPNAQIRIMVELQNHSHLCAAYGKRFGVEAMRKLGWRAYRWGGSGM
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHCCCEEEEECCCCE
ILTAIGDNRFIVALPARDSSPRTAERPVAESCLLALSGTPISHGGVHALAVVDVHAIDAE
EEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCC
SGQGSNRTREPADQLGPVPPAQHTAGWRSQYMSDMHAAVAFRQSLRSNLSYLSFQPIVRR
CCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHC
NSAPAVLYEQALLSIVGDDDQSGEHPASIVAALERLGLARLFDYRVVHAVVARLLRTSDA
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLGCRISPRSAMLDVWWASLVDWLASHPCVARRFTVEIPCNTTVTRRAAALAFVRKLQTL
CCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC
GCSVAVTDFDTGGCSLEFALLARPQVVKISAGALRALPAGNSLAERLARLVRPCSSFDPQ
CCEEEEEECCCCCCEEEEEEECCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCE
IVVEGVNDPHDLNVLEAVDAAWVQGLLQSAAVNGSRAEPLVVWQDQ
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA