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The map label for this gene is ygeK [C]

Identifier: 126444037

GI number: 126444037

Start: 1529227

End: 1529991

Strand: Reverse

Name: ygeK [C]

Synonym: BURPS668_A1595

Alternate gene names: 126444037

Gene position: 1529991-1529227 (Counterclockwise)

Preceding gene: 126443828

Following gene: 126443203

Centisome position: 48.92

GC content: 62.61

Gene sequence:

>765_bases
TTGAAGTTGATTTTCGATCATTATCCCGGCCTTTGGGGCTGCCAGGACAGCGAGTCACGTTTCATTCACGTCAACGATGC
GTTCGCGAAAGTGGTCGGCGTGCGCGATCCGCGCGAACTCGAAGACAAATCCGCGTTCGATCTGCCATGCGGATCGTCGA
ATTGCGCGGCGCAATTCCAGGCTCAGGATCGCGAGGTTCGCGAAACCGGCCGGGCAATCAAGGTGCTCGACATCCATCCC
TATGCATCGGGCGTCTGGATGGCCTTCGTCTTCACGAAGATCCCGCTCGTCGACCGGAACGACGAGATCGTCGGCACGAT
CTTCCATGCGACGGAGCTCTCGCAGATCGACATGATCACGCTCGGCCGCATGATCGGCGATTCGTACGCGGGCAAGCGGA
TCGGCGGCCCGGTCGAGCAAGGCTCGTACCGGATCGATTCGCCGAGGGACGCGCTCGAGCTCACCGAGCGCGAGCGGCAG
GTGCTGTTCTTCCTCGCGCGCAACAAGACGGCGAAGGACATCGCGAACATTCTCGGGCTGTCGGCGCGCACGATCGAGCA
ATACATGGAAAACCTGCGCTGCAAGTTCTCCGCGTCGAGCAAGAACGAATTGATCGATCTCGCGGCGGGGGCCGGCTATT
GCAACCGGATTCCGCAATCGCTGCTGCGCAACCAGCTATCGGTCGTGCTCGAGCGCGGCGAGCCGCAGATGCGCGACGCG
CGCGAGGCCGCGCGCGTGCCGCCGGCGATCATCGCGATGCTCTAG

Upstream 100 bases:

>100_bases
AGGGGACTGTTTCGCCCGCTCGCTCTTTGCGCGCGGCGAAATCATATAGGCGGCCAGAAAAATGCCAATCGGAGGCCAGA
TGAGCTGTTTCGTTGACCCG

Downstream 100 bases:

>100_bases
CGGAGCTGCCGGCGGCCGTTCGAACGAGCCGCCGACATTCGCCCCCCATCATCCGTCATCCGTCATCCGAAATTGGCCTC
GCCGTCTGCGTCCGCCTCCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKLIFDHYPGLWGCQDSESRFIHVNDAFAKVVGVRDPRELEDKSAFDLPCGSSNCAAQFQAQDREVRETGRAIKVLDIHP
YASGVWMAFVFTKIPLVDRNDEIVGTIFHATELSQIDMITLGRMIGDSYAGKRIGGPVEQGSYRIDSPRDALELTERERQ
VLFFLARNKTAKDIANILGLSARTIEQYMENLRCKFSASSKNELIDLAAGAGYCNRIPQSLLRNQLSVVLERGEPQMRDA
REAARVPPAIIAML

Sequences:

>Translated_254_residues
MKLIFDHYPGLWGCQDSESRFIHVNDAFAKVVGVRDPRELEDKSAFDLPCGSSNCAAQFQAQDREVRETGRAIKVLDIHP
YASGVWMAFVFTKIPLVDRNDEIVGTIFHATELSQIDMITLGRMIGDSYAGKRIGGPVEQGSYRIDSPRDALELTERERQ
VLFFLARNKTAKDIANILGLSARTIEQYMENLRCKFSASSKNELIDLAAGAGYCNRIPQSLLRNQLSVVLERGEPQMRDA
REAARVPPAIIAML
>Mature_254_residues
MKLIFDHYPGLWGCQDSESRFIHVNDAFAKVVGVRDPRELEDKSAFDLPCGSSNCAAQFQAQDREVRETGRAIKVLDIHP
YASGVWMAFVFTKIPLVDRNDEIVGTIFHATELSQIDMITLGRMIGDSYAGKRIGGPVEQGSYRIDSPRDALELTERERQ
VLFFLARNKTAKDIANILGLSARTIEQYMENLRCKFSASSKNELIDLAAGAGYCNRIPQSLLRNQLSVVLERGEPQMRDA
REAARVPPAIIAML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28421; Mature: 28421

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIFDHYPGLWGCQDSESRFIHVNDAFAKVVGVRDPRELEDKSAFDLPCGSSNCAAQFQ
CCEEECCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHH
AQDREVRETGRAIKVLDIHPYASGVWMAFVFTKIPLVDRNDEIVGTIFHATELSQIDMIT
HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCCHHHHHH
LGRMIGDSYAGKRIGGPVEQGSYRIDSPRDALELTERERQVLFFLARNKTAKDIANILGL
HHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCC
SARTIEQYMENLRCKFSASSKNELIDLAAGAGYCNRIPQSLLRNQLSVVLERGEPQMRDA
CHHHHHHHHHHHCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
REAARVPPAIIAML
HHHHCCCHHHEEEC
>Mature Secondary Structure
MKLIFDHYPGLWGCQDSESRFIHVNDAFAKVVGVRDPRELEDKSAFDLPCGSSNCAAQFQ
CCEEECCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHH
AQDREVRETGRAIKVLDIHPYASGVWMAFVFTKIPLVDRNDEIVGTIFHATELSQIDMIT
HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCCHHHHHH
LGRMIGDSYAGKRIGGPVEQGSYRIDSPRDALELTERERQVLFFLARNKTAKDIANILGL
HHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCC
SARTIEQYMENLRCKFSASSKNELIDLAAGAGYCNRIPQSLLRNQLSVVLERGEPQMRDA
CHHHHHHHHHHHCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
REAARVPPAIIAML
HHHHCCCHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA