| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443999
Identifier: 126443999
GI number: 126443999
Start: 2348091
End: 2350418
Strand: Reverse
Name: 126443999
Synonym: BURPS668_A2429
Alternate gene names: NA
Gene position: 2350418-2348091 (Counterclockwise)
Preceding gene: 126443017
Following gene: 126443273
Centisome position: 75.15
GC content: 69.85
Gene sequence:
>2328_bases TTGCTTGTAACCTGCTTCGCATCGTTTGAAACCTATTTTGCGTTTGCGTGCAGGCGTCGCAAACGCACGAGCGTTTCGCG TGTCGGGCTCGCCTGCGGCCAGGCGCGCGGGCGTCTCGGCACGGTCGAAGGGAGAAGCGTTTTGCGATGTTTGATGCGAA TGGCGGCAGGGGTGGCGGTGTGCGCGGCGACGGCGCTCGCGGGCGCCGCGCGAGCCGAGAACGTGCTGCCCGCGACGACG TCGTGGATCGGCAACACCTATGGCTATGGCGACGGCACGTGGACGCAGATCGACATTCGCGCGATCGCGGTCGCGCCTGA CGGCAAGGTGTATACGAACGCGCCGTGGGACGAGAGCGGCGCGGAGGCGAGCGTCTATCAGGACGGCAAGATGCTCGGCT TCGCGGGCGGCACGCACGGCTGGGGCAACGCGGGCGGCAGCGCGATCGCGGTCAACAGCCGCTACGCGTACGTCGCGATC GCGGTCGGCAACGAGAAAGGCCGGCTCGTCGCGCCGGGCGTCTGGCCGGACAAGGGCCGGCAGTGGTACGGCATCTCGCG CCGCGAGATCGGCGACGTGAAGCAGGCCGCGCCGTTTCGCGGCGCGAAGGCGGGCGACGCGCGCGCGAAGCTTGCCGCGA GCTTCCTGATGGTCAATGAAGTGCCGACCGACACGCGCGCGGAAGTCGCCGGGCTCGCCGCGAGCGACAGCGTGCTGTAC GCGAGCGATCCGCTGCACGACGCCGTGAACGTGTACGACGCGCAGACGATGCAGAAGAAAGGGTCATGGAGCGCGCATGA GCCGGGCCGGATCGCGCTCGCCGCCGACGGCACGCTCTGGCTGTTGACCGATACGCTGAACGGCCCCGCGAAGCTCGCGC ATGTGCGGCCCGACGGGCGCGCGATCGACGACGCGCCGGCGCTGCCGCCGGACGCGCAGGCCGTCGACGTCGCGACCGAT GCGAAGGGCCGCGTGCTTCTCGCCGACAACGGCCCGCGCCAGCAGATCCTGATCTTCTCGAAATCGGCCGACGGCGGCTA CGCGATGAGCGGCACGCTCGGCGAGCGCGGCGGCATCTTCTCGGGCGTCGCGGGCCGGCCGGGGCCGCAGCGCTTCAACG GGCTCACGGGCGTCGGCGTCGACCGGGCGGGCAACGTGTACGTCGCGACCAACGGCATCGGCCCGCGCCACGGCACGATC GGCGCGGGGCTCGGCAGCACGCTCGAGAGCTACGCGCCCGACGGCCGGCTGCGCTGGCAGGTTCAGGGCCTGCTGTTCGT CGACGGCGCGTGGATCGACCCGGGCCGGCCGAACAGCGTGTACACGGGCAACAAGCGCTTCGAGCTCGATCTGTCGAAGC CCGCGGGCAAGGAGTGGAAATATGCGGGATTCCTGTCGAACCGCTTCAAGTATCCGGACGACCCGGTGTTCAACACCGAT CAATGGCCGGGGATGCCGTTCGCGCGCAGGGTCGCGGGCCGCACGTTCCTCTACCTGACCGACATGCACGCCGACCATCT GAAGATCTATCGCTTCGATCCGAAGCGCGACGGCGAGACCGCGATTCCGTCGGGGCTGCTCGCGGGGCGCGCGCGGCCCG TCGACAAGGTGCCGAACCGGCCGCCGGGCGGCGATTGGATCTGGCGCGACGCGAACGGCAACGGCCGCATCGACGAAGGC GAGTTCGAGCTCAACACGACCGGCAAGGGGATGGCGGGCGGCTGGGGCTGGTGGATCGACACGGGCGGCGATATCTGGCG CACGAGCGACACGCGCGGCATCCGGCGCTTTCGCTTCGGCGGGCTCGACAAGGCGGGCAACCCGATCTACTCGTACGACA AGCTGACGACGTACCCAAGCCCCGCGCCGTTTACCGAGCTGCGCCGCGCGCTGTACGACGCGTCCTCGGACACGCTGTAC GTGACGGGCTACACGGCCGACGCACCGCGCGTGGGCGGCCTGTCGAAGGAGGTGGGGCGCGTGCTCGTGCGCTTCGACAA GTGGTCGAGCGGCGCGCCGGTCATGCGCTATCAGGTCGCGCTGCCGTGGCGGCTCGACGCGAAGCCGATCTTCACGCTGA TCGGGCTGACGCAGGAGGGGCGCTACCTGTTCGGCGTCGAGCCCGTCGGCACGGTGCACGTGTACGACAAGGACAACGGC CGCGAGCTCGGCGTGATCAAGCCGGGGCCGGAGGTGGGGCGCGCGTCGGGCTGGGTAGACGTGCCGTTCGGCATCAGCGC GTACCGGCGCGAGAACGGCGAGTACCTGGTCTTCGTCGAGGAGGACGCGCGCGGCAAGGTGATGATGTATCGATGGAGGC CGCAATGA
Upstream 100 bases:
>100_bases TGCCGACGCGCGGCCGTGCGCGACGAATCGAATGGATCATTCGATACGCGATCGCGCGCCGAAATATCCGCAAATATTTC CAAATTTCTTGTGAATATTT
Downstream 100 bases:
>100_bases TCGGGGCGGGAGCGACGGCGATGGCGAACGCGGCGGGGCGGCGCGTCCATGGATAAAGGCATGCTGAAGAACGTCGCGAT CAATTTCTTCGGATTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 775; Mature: 775
Protein sequence:
>775_residues MLVTCFASFETYFAFACRRRKRTSVSRVGLACGQARGRLGTVEGRSVLRCLMRMAAGVAVCAATALAGAARAENVLPATT SWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAI AVGNEKGRLVAPGVWPDKGRQWYGISRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEVAGLAASDSVLY ASDPLHDAVNVYDAQTMQKKGSWSAHEPGRIALAADGTLWLLTDTLNGPAKLAHVRPDGRAIDDAPALPPDAQAVDVATD AKGRVLLADNGPRQQILIFSKSADGGYAMSGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTI GAGLGSTLESYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRFKYPDDPVFNTD QWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAGRARPVDKVPNRPPGGDWIWRDANGNGRIDEG EFELNTTGKGMAGGWGWWIDTGGDIWRTSDTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLY VTGYTADAPRVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPVGTVHVYDKDNG RELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMMYRWRPQ
Sequences:
>Translated_775_residues MLVTCFASFETYFAFACRRRKRTSVSRVGLACGQARGRLGTVEGRSVLRCLMRMAAGVAVCAATALAGAARAENVLPATT SWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAI AVGNEKGRLVAPGVWPDKGRQWYGISRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEVAGLAASDSVLY ASDPLHDAVNVYDAQTMQKKGSWSAHEPGRIALAADGTLWLLTDTLNGPAKLAHVRPDGRAIDDAPALPPDAQAVDVATD AKGRVLLADNGPRQQILIFSKSADGGYAMSGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTI GAGLGSTLESYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRFKYPDDPVFNTD QWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAGRARPVDKVPNRPPGGDWIWRDANGNGRIDEG EFELNTTGKGMAGGWGWWIDTGGDIWRTSDTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLY VTGYTADAPRVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPVGTVHVYDKDNG RELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMMYRWRPQ >Mature_775_residues MLVTCFASFETYFAFACRRRKRTSVSRVGLACGQARGRLGTVEGRSVLRCLMRMAAGVAVCAATALAGAARAENVLPATT SWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAI AVGNEKGRLVAPGVWPDKGRQWYGISRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEVAGLAASDSVLY ASDPLHDAVNVYDAQTMQKKGSWSAHEPGRIALAADGTLWLLTDTLNGPAKLAHVRPDGRAIDDAPALPPDAQAVDVATD AKGRVLLADNGPRQQILIFSKSADGGYAMSGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTI GAGLGSTLESYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRFKYPDDPVFNTD QWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAGRARPVDKVPNRPPGGDWIWRDANGNGRIDEG EFELNTTGKGMAGGWGWWIDTGGDIWRTSDTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLY VTGYTADAPRVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPVGTVHVYDKDNG RELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMMYRWRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83802; Mature: 83802
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTCFASFETYFAFACRRRKRTSVSRVGLACGQARGRLGTVEGRSVLRCLMRMAAGVAV CEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHH CAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESG HHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCC AEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVWPDKGR CCEEEECCCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEECCCCCCCCC QWYGISRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEVAGLAASDSVLY EEECCCHHHHCCHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHHHEEEECCCCEEE ASDPLHDAVNVYDAQTMQKKGSWSAHEPGRIALAADGTLWLLTDTLNGPAKLAHVRPDGR ECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEECCCCC AIDDAPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGGYAMSGTLGERGGIF CCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCEE SGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLESYAPDGRLRWQ ECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEE VQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRFKYPDDPVFNTD EEEEEEECCEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEHHHCCCCCCCCCCCCCC QWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAGRARPVDKVPNR CCCCCCHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHCCCC PPGGDWIWRDANGNGRIDEGEFELNTTGKGMAGGWGWWIDTGGDIWRTSDTRGIRRFRFG CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEECCCCCCHHEEECC GLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAPRVGGLSKEVGR CCCCCCCCCEECCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHCE VLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPVGTVHVYDKDNG EEEEEECCCCCCCEEEEEEECCEEECCCCEEEEEEECCCCCEEEECCCCCEEEEEECCCC RELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMMYRWRPQ CEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCCEEEEEECCC >Mature Secondary Structure MLVTCFASFETYFAFACRRRKRTSVSRVGLACGQARGRLGTVEGRSVLRCLMRMAAGVAV CEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHH CAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESG HHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCC AEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVWPDKGR CCEEEECCCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEECCCCCCCCC QWYGISRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEVAGLAASDSVLY EEECCCHHHHCCHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHHHEEEECCCCEEE ASDPLHDAVNVYDAQTMQKKGSWSAHEPGRIALAADGTLWLLTDTLNGPAKLAHVRPDGR ECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEECCCCC AIDDAPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGGYAMSGTLGERGGIF CCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCEE SGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLESYAPDGRLRWQ ECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEE VQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRFKYPDDPVFNTD EEEEEEECCEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEHHHCCCCCCCCCCCCCC QWPGMPFARRVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGLLAGRARPVDKVPNR CCCCCCHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHCCCC PPGGDWIWRDANGNGRIDEGEFELNTTGKGMAGGWGWWIDTGGDIWRTSDTRGIRRFRFG CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEECCCCCCHHEEECC GLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAPRVGGLSKEVGR CCCCCCCCCEECCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHCE VLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPVGTVHVYDKDNG EEEEEECCCCCCCEEEEEEECCEEECCCCEEEEEEECCCCCEEEECCCCCEEEEEECCCC RELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGKVMMYRWRPQ CEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA