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The map label for this gene is ssuA [H]

Identifier: 126443934

GI number: 126443934

Start: 1271395

End: 1272378

Strand: Reverse

Name: ssuA [H]

Synonym: BURPS668_A1350

Alternate gene names: 126443934

Gene position: 1272378-1271395 (Counterclockwise)

Preceding gene: 126444735

Following gene: 126444799

Centisome position: 40.68

GC content: 69.51

Gene sequence:

>984_bases
ATGATTCGCCCTGCCCGCTGGATTGCCCGAACCGTCACCGCCGCACTCGCGTCGCTTTGCGTCGTCTCCGCGTTCGCGCA
GGACGCCGCCGGCGACAAGGTGCTGCGCGTCGGCTATCAGAAGGCGGGGCTGCTCGCGGTCGTCAAGGCGCAGGGTACGC
TCGAGACGCGCGTGAAGCCGCTCGGCTACACGGTCAAATGGTTCGAGTTCCCGGCCGGGCCGCAACTGCTCGAAGCGCTG
AACGCGGACAGCGTCGACATCGGCTACACGGGCGCACCGCCCGCGGTGTTCGCGCAGGCGAGCGGCGTGCGCTTCGTCTA
CGTCGGCGCGGAGCCGCCGTCGCCGCACAACGAGGCGATCGTCGTGAAAGCCGATTCGCCGCTCAGGCGCGTCGCCGATC
TGCGGGGCAGGAAAGTCGCGCTGCAGAAAGGCTCGAGCGCGAACTATCTGCTGCTCGAAGCGTTGCGCCAAGCCGGCGTG
CGCTACGACGAGATCCGCCCGATCTACCTGCCGCCCGCCGACGCGCGCGCCGCGTTCGAGAGCGGCACCGTCGACGCGTG
GGTGGTCTGGGATCCGTACTACGCGGCCGCGCAGCACGCGCTGAAGGCACGCACGCTCGCCGACTACACCGGCTTGTCCG
CCACGTACAACTTCTATGAAGCGACGCGCGATTTCGCGACCCGCCATCCGGACGTCGTCGGCGCGGTACTGCAGCAGTTG
CGCGAGACCGGCCTGTGGGTCAACGCGCATTCCGCCGAAACCGCCGCGCTGATCGCGCCGAAGATCGGCCTCGATCGGGC
GCTCGTCGAGACCTGGGTGAAACGCGTGCCGTACGGCACGACGCCGCTCGACGACAAGATCGTCGCGTCGCAGCAGCGCG
TCGCCGACGCGTTTCACGCGGCGAAGCTGATTCCGCGAAAGCTGACCGTCGCCGACAACGTCTGGACCGAGCGCCGCGCC
GCCGCCGCGCTCGCGGCGAAGTAG

Upstream 100 bases:

>100_bases
GGCAATGCTTGGTTCGCGCGGGCGCCTGCCCGTGCGACGATTATCCCGACTCGGGCGGCGTGCTCGCCGCCCGCTTCGTT
CAACGTCGTGGAGATTGCCG

Downstream 100 bases:

>100_bases
GCGCGGCGGCCGCTGCTTGCCGGGGGCTGATGTTCACGGTTCACGGTTCACGGTTCACGGTTCACGGACACGTTAGAAGG
ATTCATCCGCCCCCGTTCAC

Product: aliphatic sulfonate ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MIRPARWIARTVTAALASLCVVSAFAQDAAGDKVLRVGYQKAGLLAVVKAQGTLETRVKPLGYTVKWFEFPAGPQLLEAL
NADSVDIGYTGAPPAVFAQASGVRFVYVGAEPPSPHNEAIVVKADSPLRRVADLRGRKVALQKGSSANYLLLEALRQAGV
RYDEIRPIYLPPADARAAFESGTVDAWVVWDPYYAAAQHALKARTLADYTGLSATYNFYEATRDFATRHPDVVGAVLQQL
RETGLWVNAHSAETAALIAPKIGLDRALVETWVKRVPYGTTPLDDKIVASQQRVADAFHAAKLIPRKLTVADNVWTERRA
AAALAAK

Sequences:

>Translated_327_residues
MIRPARWIARTVTAALASLCVVSAFAQDAAGDKVLRVGYQKAGLLAVVKAQGTLETRVKPLGYTVKWFEFPAGPQLLEAL
NADSVDIGYTGAPPAVFAQASGVRFVYVGAEPPSPHNEAIVVKADSPLRRVADLRGRKVALQKGSSANYLLLEALRQAGV
RYDEIRPIYLPPADARAAFESGTVDAWVVWDPYYAAAQHALKARTLADYTGLSATYNFYEATRDFATRHPDVVGAVLQQL
RETGLWVNAHSAETAALIAPKIGLDRALVETWVKRVPYGTTPLDDKIVASQQRVADAFHAAKLIPRKLTVADNVWTERRA
AAALAAK
>Mature_327_residues
MIRPARWIARTVTAALASLCVVSAFAQDAAGDKVLRVGYQKAGLLAVVKAQGTLETRVKPLGYTVKWFEFPAGPQLLEAL
NADSVDIGYTGAPPAVFAQASGVRFVYVGAEPPSPHNEAIVVKADSPLRRVADLRGRKVALQKGSSANYLLLEALRQAGV
RYDEIRPIYLPPADARAAFESGTVDAWVVWDPYYAAAQHALKARTLADYTGLSATYNFYEATRDFATRHPDVVGAVLQQL
RETGLWVNAHSAETAALIAPKIGLDRALVETWVKRVPYGTTPLDDKIVASQQRVADAFHAAKLIPRKLTVADNVWTERRA
AAALAAK

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=307, Percent_Identity=43.6482084690554, Blast_Score=254, Evalue=5e-69,
Organism=Escherichia coli, GI87081727, Length=183, Percent_Identity=30.0546448087432, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35402; Mature: 35402

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPARWIARTVTAALASLCVVSAFAQDAAGDKVLRVGYQKAGLLAVVKAQGTLETRVKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCHHHCCCC
LGYTVKWFEFPAGPQLLEALNADSVDIGYTGAPPAVFAQASGVRFVYVGAEPPSPHNEAI
CCCEEEEEECCCCHHHHHHCCCCCEECCCCCCCHHHHEECCCEEEEEEECCCCCCCCCEE
VVKADSPLRRVADLRGRKVALQKGSSANYLLLEALRQAGVRYDEIRPIYLPPADARAAFE
EEECCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHC
SGTVDAWVVWDPYYAAAQHALKARTLADYTGLSATYNFYEATRDFATRHPDVVGAVLQQL
CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
RETGLWVNAHSAETAALIAPKIGLDRALVETWVKRVPYGTTPLDDKIVASQQRVADAFHA
HHCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AKLIPRKLTVADNVWTERRAAAALAAK
HHHCCCCEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRPARWIARTVTAALASLCVVSAFAQDAAGDKVLRVGYQKAGLLAVVKAQGTLETRVKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCHHHCCCC
LGYTVKWFEFPAGPQLLEALNADSVDIGYTGAPPAVFAQASGVRFVYVGAEPPSPHNEAI
CCCEEEEEECCCCHHHHHHCCCCCEECCCCCCCHHHHEECCCEEEEEEECCCCCCCCCEE
VVKADSPLRRVADLRGRKVALQKGSSANYLLLEALRQAGVRYDEIRPIYLPPADARAAFE
EEECCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHC
SGTVDAWVVWDPYYAAAQHALKARTLADYTGLSATYNFYEATRDFATRHPDVVGAVLQQL
CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
RETGLWVNAHSAETAALIAPKIGLDRALVETWVKRVPYGTTPLDDKIVASQQRVADAFHA
HHCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AKLIPRKLTVADNVWTERRAAAALAAK
HHHCCCCEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]