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The map label for this gene is ynfJ [C]

Identifier: 126443873

GI number: 126443873

Start: 1430410

End: 1432281

Strand: Reverse

Name: ynfJ [C]

Synonym: BURPS668_A1486

Alternate gene names: 126443873

Gene position: 1432281-1430410 (Counterclockwise)

Preceding gene: 126444427

Following gene: 126442580

Centisome position: 45.8

GC content: 71.69

Gene sequence:

>1872_bases
ATGAGCATCGCCGCCCCACACAAACGCGATTTCGCGTCGAACGCGCGACTGCCGCGCATCGCGCTCCTCGCGCTCGCGAT
CGGCGTGCTCAGCACGTTCGCCGCGTTCGCGCTGCTGAGCCTCATCCATCTGTTCACGAACCTGTTCTTCTTCCAGCGGT
TCTCGTTCGCCGAGCACTCGCCCGCGCTGAACACGCTCGGGCCGTGGGCGGCCGCGGTGCCCGTCGCGGGCGGCATCGTC
GTCGGGCTGATCGCGCGCTTCGGCTCCGAGAAGATCCGCGGCCACGGCATTCCCGAGGCGATCGAGGCGATCCTGTTCGG
CAAGAGCCGGATGTCGCCGAAGGTCGCCGTATTGAAGCCGCTCGCGTCGGGCATCGTGATCGGCAGCGGCGGGCCGTTCG
GCGCCGAAGGGCCGATCATCATGACGGGCGGCGCGATCGGCTCGCTGATCGCGCAGTTCGTGAAGGTGACGGCGGCCGAG
CGCAAGACGCTGCTCGTCGCGGGCGCGACGGCCGGGATGACCGCGGTGTTCGGCACGCCGGTGGCCGCCGTGCTGCTCGC
CGTCGAACTGCTGCTGTTCGAATGGCGGCCGCGCAGCTTCCTGCCGGTCGCGCTCGCGTGCGCGGTCGCGGGCTTCGCGC
GCGCCGCGTTCTTCGGCGTCGGCCCGCTGTTTCCGGTCGAGACCGCGGCTCCGACGGCCGCCGCGCTCGGCTCGTGCGCG
CTGGCGGGGCTCCTGTCGGGCGCGCTCGCGTGCGGGCTGTCGGTCTCGCTCTACAAGATCGAGGACCGGTTCGGCAAGCT
GCCGGTTCACTGGATGTGGTGGCCCGCGATCGGCGGCCTCGCGGTCGGGATCGGCGGGCTCATCGAGCCGCGCGCGCTCG
GCGTCGGCTACGACGTGATCGGCGATCTGCTGCACGGCCATATCGCGCTGCAGATCGCGCTCGCGATTCTCGTCGTCAAG
GCGGTGATCTGGGTGATCGCGCTCGGCTCGGGCACCTCGGGCGGCGTGCTCGCGCCGCTGCTGATGCTGGGCGCGGGGCT
CGGCACGCTGCTCGGGCCCGTGCTGCCGGGCGGCGAGCCCGCGCTGTGGCCGCTCGTGTGCATGGCCGCGACGCTCGGCG
CCACGCTCGGCGCGCCGCTCACCGCGATCGTGTTCGCATTCGGCCTCACGCACGACGCGAACGCGCTGCTGCCGCTGCTC
ACCGCGACGCTCGTCGCGCACGGCTTCGCGACTGTCGCGATGAAGCGCTCGATCATGACCGAGAAAATCGCGCGGCGCGG
CTATCACATCTATCGCGAATACGGCGTCGATCCGCTCGAGCGCCATTACGTCGACGAAGTAATGACGCGCAGCGCGGTGA
CGATCGACGCGGACCTGAGCGTCGAGGTCGTGCGCGCGCGCTACTTCGGCGCGACGCAGGCGCACCGCGCGTATCCGGTC
GTGCGCGACGGCGTGCTGATCGGCATGCTCGATCGCGCGACGCTCGACGGGAGCCCCGCCGCGCACGACGGCGACGGGCA
GGCCGACGACGCGCGAGCGGCGAAGATGCGGGCGGCCGACGTGCAGATGATCGACATGCGGGTGGCCGACGTGCGGGTGG
CCGACGTGCTGCCGCGCCGCGCCCCGCTCTTCTCGCTCGCCGACGAAACGTGCCGCCTCGTCGCGACGCGGCTCGCCGTG
CACCAGCTCGAACGCCTGCCGGTCGTCGCCGATCCGGACACGATGCGCGTCGTCGGCATCGTGTCGCGCAGCGATCTCGT
GAAGCCGGCGCTGCGCCACTTCGACGACGAGCACAAACGCGAACGCTTCCGTCGCGCGCATCCCGCCGCGTTCGTCAAGC
GCCGCTTCGCACCGGCGCGCAAGACGGGCTGA

Upstream 100 bases:

>100_bases
GAGCTGCACCGCGCCGAGCTGAAATCGCTGCGCGGCGCCTTCCAGGTGCCGCAGATCGATTACTGAACCGATAAGACCAC
GAACGCTTGCCCCCGACATC

Downstream 100 bases:

>100_bases
ACGGCGCGGCGGCGCGGCGGCGGCCGCGCGAGGCCGCGCGAGACCGATTCACGCGTCGCCTCGTCCGGCGCGCGCCGCGC
TCGGCATGCCCGGCGGGCGC

Product: chloride channel (ClC) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MSIAAPHKRDFASNARLPRIALLALAIGVLSTFAAFALLSLIHLFTNLFFFQRFSFAEHSPALNTLGPWAAAVPVAGGIV
VGLIARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLASGIVIGSGGPFGAEGPIIMTGGAIGSLIAQFVKVTAAE
RKTLLVAGATAGMTAVFGTPVAAVLLAVELLLFEWRPRSFLPVALACAVAGFARAAFFGVGPLFPVETAAPTAAALGSCA
LAGLLSGALACGLSVSLYKIEDRFGKLPVHWMWWPAIGGLAVGIGGLIEPRALGVGYDVIGDLLHGHIALQIALAILVVK
AVIWVIALGSGTSGGVLAPLLMLGAGLGTLLGPVLPGGEPALWPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLL
TATLVAHGFATVAMKRSIMTEKIARRGYHIYREYGVDPLERHYVDEVMTRSAVTIDADLSVEVVRARYFGATQAHRAYPV
VRDGVLIGMLDRATLDGSPAAHDGDGQADDARAAKMRAADVQMIDMRVADVRVADVLPRRAPLFSLADETCRLVATRLAV
HQLERLPVVADPDTMRVVGIVSRSDLVKPALRHFDDEHKRERFRRAHPAAFVKRRFAPARKTG

Sequences:

>Translated_623_residues
MSIAAPHKRDFASNARLPRIALLALAIGVLSTFAAFALLSLIHLFTNLFFFQRFSFAEHSPALNTLGPWAAAVPVAGGIV
VGLIARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLASGIVIGSGGPFGAEGPIIMTGGAIGSLIAQFVKVTAAE
RKTLLVAGATAGMTAVFGTPVAAVLLAVELLLFEWRPRSFLPVALACAVAGFARAAFFGVGPLFPVETAAPTAAALGSCA
LAGLLSGALACGLSVSLYKIEDRFGKLPVHWMWWPAIGGLAVGIGGLIEPRALGVGYDVIGDLLHGHIALQIALAILVVK
AVIWVIALGSGTSGGVLAPLLMLGAGLGTLLGPVLPGGEPALWPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLL
TATLVAHGFATVAMKRSIMTEKIARRGYHIYREYGVDPLERHYVDEVMTRSAVTIDADLSVEVVRARYFGATQAHRAYPV
VRDGVLIGMLDRATLDGSPAAHDGDGQADDARAAKMRAADVQMIDMRVADVRVADVLPRRAPLFSLADETCRLVATRLAV
HQLERLPVVADPDTMRVVGIVSRSDLVKPALRHFDDEHKRERFRRAHPAAFVKRRFAPARKTG
>Mature_622_residues
SIAAPHKRDFASNARLPRIALLALAIGVLSTFAAFALLSLIHLFTNLFFFQRFSFAEHSPALNTLGPWAAAVPVAGGIVV
GLIARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLASGIVIGSGGPFGAEGPIIMTGGAIGSLIAQFVKVTAAER
KTLLVAGATAGMTAVFGTPVAAVLLAVELLLFEWRPRSFLPVALACAVAGFARAAFFGVGPLFPVETAAPTAAALGSCAL
AGLLSGALACGLSVSLYKIEDRFGKLPVHWMWWPAIGGLAVGIGGLIEPRALGVGYDVIGDLLHGHIALQIALAILVVKA
VIWVIALGSGTSGGVLAPLLMLGAGLGTLLGPVLPGGEPALWPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLLT
ATLVAHGFATVAMKRSIMTEKIARRGYHIYREYGVDPLERHYVDEVMTRSAVTIDADLSVEVVRARYFGATQAHRAYPVV
RDGVLIGMLDRATLDGSPAAHDGDGQADDARAAKMRAADVQMIDMRVADVRVADVLPRRAPLFSLADETCRLVATRLAVH
QLERLPVVADPDTMRVVGIVSRSDLVKPALRHFDDEHKRERFRRAHPAAFVKRRFAPARKTG

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=426, Percent_Identity=29.5774647887324, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786350, Length=316, Percent_Identity=26.5822784810127, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 65529; Mature: 65398

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAAPHKRDFASNARLPRIALLALAIGVLSTFAAFALLSLIHLFTNLFFFQRFSFAEHS
CCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PALNTLGPWAAAVPVAGGIVVGLIARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCCCCCCHHHHHHH
LASGIVIGSGGPFGAEGPIIMTGGAIGSLIAQFVKVTAAERKTLLVAGATAGMTAVFGTP
HHCCEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCH
VAAVLLAVELLLFEWRPRSFLPVALACAVAGFARAAFFGVGPLFPVETAAPTAAALGSCA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
LAGLLSGALACGLSVSLYKIEDRFGKLPVHWMWWPAIGGLAVGIGGLIEPRALGVGYDVI
HHHHHHHHHHHCCCEEEEEEHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHCCCHHHH
GDLLHGHIALQIALAILVVKAVIWVIALGSGTSGGVLAPLLMLGAGLGTLLGPVLPGGEP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCC
ALWPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLLTATLVAHGFATVAMKRSIMT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIARRGYHIYREYGVDPLERHYVDEVMTRSAVTIDADLSVEVVRARYFGATQAHRAYPV
HHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCHHHHCCCH
VRDGVLIGMLDRATLDGSPAAHDGDGQADDARAAKMRAADVQMIDMRVADVRVADVLPRR
HHCCEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APLFSLADETCRLVATRLAVHQLERLPVVADPDTMRVVGIVSRSDLVKPALRHFDDEHKR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEEECHHHHHHHHHHHCCHHHHH
ERFRRAHPAAFVKRRFAPARKTG
HHHHHHCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SIAAPHKRDFASNARLPRIALLALAIGVLSTFAAFALLSLIHLFTNLFFFQRFSFAEHS
CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PALNTLGPWAAAVPVAGGIVVGLIARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCCCCCCHHHHHHH
LASGIVIGSGGPFGAEGPIIMTGGAIGSLIAQFVKVTAAERKTLLVAGATAGMTAVFGTP
HHCCEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCH
VAAVLLAVELLLFEWRPRSFLPVALACAVAGFARAAFFGVGPLFPVETAAPTAAALGSCA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
LAGLLSGALACGLSVSLYKIEDRFGKLPVHWMWWPAIGGLAVGIGGLIEPRALGVGYDVI
HHHHHHHHHHHCCCEEEEEEHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHCCCHHHH
GDLLHGHIALQIALAILVVKAVIWVIALGSGTSGGVLAPLLMLGAGLGTLLGPVLPGGEP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCC
ALWPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLLTATLVAHGFATVAMKRSIMT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIARRGYHIYREYGVDPLERHYVDEVMTRSAVTIDADLSVEVVRARYFGATQAHRAYPV
HHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCHHHHCCCH
VRDGVLIGMLDRATLDGSPAAHDGDGQADDARAAKMRAADVQMIDMRVADVRVADVLPRR
HHCCEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APLFSLADETCRLVATRLAVHQLERLPVVADPDTMRVVGIVSRSDLVKPALRHFDDEHKR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEEECHHHHHHHHHHHCCHHHHH
ERFRRAHPAAFVKRRFAPARKTG
HHHHHHCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]