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The map label for this gene is bkdR [H]

Identifier: 126443778

GI number: 126443778

Start: 1124823

End: 1125290

Strand: Reverse

Name: bkdR [H]

Synonym: BURPS668_A1184

Alternate gene names: 126443778

Gene position: 1125290-1124823 (Counterclockwise)

Preceding gene: 126443990

Following gene: 126442555

Centisome position: 35.98

GC content: 63.68

Gene sequence:

>468_bases
ATGCAAGAACCGCTTCTTGACCGCATCGATCGCCATTTACTCGACATCCTGCAGGAAAACGGCCGCATCTCCAATCTGGA
GCTCGCCAAGGCCGTCGGGCTGTCGCCCGCCCAAACGCTCAGGCGCCACCGGCGCCTCGAGGAGATCGGCGCCATCAAGC
GCTACGAGACCCGGCTCGATGCCGACACGCTCGGCTTCGGGGTCACCGCGTTCGTGCAGGTGACGATGGAACGCGGGCAC
ATCCGCGATCTGTCGACGTTCCAGAAGCTCGTGTCCGAGCTCGCGCAAATCCAGGAGTGCTTTTCGGTGACGGGCGACAT
CGACTACGTGCTGAAGGTCGTCGCCGCCGATCTGAAAGGGCTCTCGACGTTCCTGCTCGACACGCTGATGCGCATCCCCG
GCGTGAGCGGCGTGCACTCGAGCGTATGCCTCGACGAGATCAAGTGCACGAGCGCGATGCCGCTGTAG

Upstream 100 bases:

>100_bases
GTTTATCGCCGGCGGGATGAAATGGGGTTTCGTAAGCCCTTCATGCAAACCCTACATTATGAGATAAAATTGCATACAGG
AGACAGCCGAGGAAACAAAA

Downstream 100 bases:

>100_bases
CGCGGCGAAACAATGAACGGGCGAACAGGCGCGATACGCCCGGCGGCGTCCGCCCGGCGTCGATCCGTGCGCGGCGCATG
GAGCGCAACGGCCGCCGGCG

Product: bkd operon transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGAIKRYETRLDADTLGFGVTAFVQVTMERGH
IRDLSTFQKLVSELAQIQECFSVTGDIDYVLKVVAADLKGLSTFLLDTLMRIPGVSGVHSSVCLDEIKCTSAMPL

Sequences:

>Translated_155_residues
MQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGAIKRYETRLDADTLGFGVTAFVQVTMERGH
IRDLSTFQKLVSELAQIQECFSVTGDIDYVLKVVAADLKGLSTFLLDTLMRIPGVSGVHSSVCLDEIKCTSAMPL
>Mature_155_residues
MQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGAIKRYETRLDADTLGFGVTAFVQVTMERGH
IRDLSTFQKLVSELAQIQECFSVTGDIDYVLKVVAADLKGLSTFLLDTLMRIPGVSGVHSSVCLDEIKCTSAMPL

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=42.5675675675676, Blast_Score=122, Evalue=8e-30,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=32.4503311258278, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17264; Mature: 17264

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGAIKRYETRLD
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ADTLGFGVTAFVQVTMERGHIRDLSTFQKLVSELAQIQECFSVTGDIDYVLKVVAADLKG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSTFLLDTLMRIPGVSGVHSSVCLDEIKCTSAMPL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGAIKRYETRLD
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ADTLGFGVTAFVQVTMERGHIRDLSTFQKLVSELAQIQECFSVTGDIDYVLKVVAADLKG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSTFLLDTLMRIPGVSGVHSSVCLDEIKCTSAMPL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]