| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443727
Identifier: 126443727
GI number: 126443727
Start: 825172
End: 826875
Strand: Reverse
Name: 126443727
Synonym: BURPS668_A0846
Alternate gene names: NA
Gene position: 826875-825172 (Counterclockwise)
Preceding gene: 126442312
Following gene: 126444104
Centisome position: 26.44
GC content: 68.02
Gene sequence:
>1704_bases ATGCAGACATCCCGTAAAGCACTGCCGCTCGCGCTGGGTCTTGCCATCGGCCTCGGCGCCGCGCTGCCCGCGTGGGCCGA TTCGAAGGCACCGAGCCCGCAGGAGGAAAGCCGGCGCGCGAGCCTCACGCGCGGCGTCGTGGCGCCTGCGGAACAGGCCG GCAAGACCGGGCAGTTCCGCCCCGGGGCCGTTGCCGTGACGCTGGCGAGCCCGGCGTTTCATGCGAAGAAGGCCGATGCG GCGGCGATGGCGCGCGAGTACGTCACCGCGCGCGCAGCGCAGCTCGGCCTCGACAAGGCCGCGCTCGCGAATCTCGTCGT CGCGTCCGAACGCGCCGACGCCGCGTTCACCGTCGTGCGCTTCCAGCAGCGCGCCGCGGGGCTGCCCGTCTATGACAGCG ACATCGCGGTCACGGTCGCGCCGGACGGCCGCGTGCTGTACGTCGCGAGCAAGGCGGTGAGCGGCGTCGCGGCCGTGTCG AGCAAGACGCAGGCGGTCGACGAGCAGCAGGCGCTCGACCGCGCGCGCGCCTACCTCGGCGTCGGCGGCTTCGTGAACGT GCAGTCGCAGCTCGTCGCATTCGTCGACGGCGCGGGCACGCATACCGCGTGGAAGGTGCGCGGCAGGCCGCAGGACAGCC TGCACGGCGACTGGGAGCTGATCATCGACGCGGGCAGCGGCGAAGTGCTGCGCGCGCAAGACAAGGCATCCTACGCAACG GACGGCAGCGGGCTCGTGTTCCGGCCGGATCCGTTGTCCCCGACGAAAAGCAGCTACGGCAGCCCCGGCTTCAAGGACAA CAACGATGCGGACTCGCCGCAACTAAGCGCCGCGCGCGTGCGCGTGACGCTCAAGGATCTGACGCAGACGAGCGGCGGCT ACAAGCTGAGCGGCCCGTATGCATCGTGCATCGATTTCGATGCGCCGCTCGACAAGGCGTGCCCGGTTCAGGCGTCGACG ACCTTCGATTTCACACGCTCGAACCTCTATTTCGAGGCGGTGAACGCGTATTACCACATCGACACGTTCCTGCGCTACGT GAACCTGACGCTCGGCATCAAGGCGTCGCCGTACCAGTATGCGGGCGGCGTCCAGTACGATCCGCACGGCCAATCCGGCG ACGATAACTCGTCGTACTCGCCGAGCTCCGGCAGGTTGTCGTTCGGGCAAGGCGGCGTCGACGACGCGGAAGACGCGGAT GTCGTGATTCACGAGCTCGGCCACGGCATCCATGACTGGATCACCAACGGCGGACTGTCGCAGGTCGAGGGCCTGTCCGA AGGCACGGGCGACTATCTCGCGGCCGCATACAGCCGCGACTTCAACCAATGGAGCCCGTCCGACGCGCAGTATCACTGGG TGTTCAACTGGGACGGCCACAACGAATTCTGGGCCGGCCGCGTCACCAATTACAACGTCGGCCGCACGTACGCGCAGATC CGCAATGCCGCGATCCACACCGCCGGCCAGTACTGGGCGTCGTGCAACATGGTCGCGCGCGACGCGATCGGCGGCGCGGC GATGGACAAGGCGTTCCTGAAAGGATTGTCGATGACGAACGGCTCGACGAACCAGAAGGCCGCGGCGCAGGCGGTGCTGA CCGCGGCGGCGGCGCTCGGCTACAGCAGCGCGCAGCTCAATGCGATCGGCGACGCGTACAACAAGAGCTGCACGTACGGC GTGACCGTGCCGCAGAAGCTGTAA
Upstream 100 bases:
>100_bases CGGTTGCATCGGCCAGTCAAGGCCGGCGCACGGACCGGGTCGTCCCTGCGGTTCCCGTGGTTTCGTTTGTCATCCAAACC TTTGAAGACGAGGACAATCT
Downstream 100 bases:
>100_bases GCCGCACCTTGCTCATCGAGAAAAAGACGTAAGCGATAACGACGCGGGGCGCGCGGCACGATCTGCCGCGCGCCCGTCCC CTCGACTGCATCTCCCCTCA
Product: metallopeptidase domain-containing protein
Products: NA
Alternate protein names: Bacillolysin; Peptidase; Metallopeptidase Domain-Containing Protein
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVRGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKASPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL
Sequences:
>Translated_567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVRGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKASPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL >Mature_567_residues MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFRPGAVAVTLASPAFHAKKADA AAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVRFQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVS SKTQAVDEQQALDRARAYLGVGGFVNVQSQLVAFVDGAGTHTAWKVRGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPYASCIDFDAPLDKACPVQAST TFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKASPYQYAGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDAD VVIHELGHGIHDWITNGGLSQVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALGYSSAQLNAIGDAYNKSCTYG VTVPQKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59883; Mature: 59883
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFR CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC PGAVAVTLASPAFHAKKADAAAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVR CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCEEHHEE FQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVSSKTQAVDEQQALDRARAYLG HHHHHCCCCEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGGFVNVQSQLVAFVDGAGTHTAWKVRGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT CCCEEEHHHHEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCC DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPY CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCEEECCCC ASCIDFDAPLDKACPVQASTTFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKASPYQY CEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHEEECCCCCCHH AGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDADVVIHELGHGIHDWITNGGLS CCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCHH QVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI HHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEECCEECCCCCHHHHHH RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALG HHHHHHCCHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC YSSAQLNAIGDAYNKSCTYGVTVPQKL CCCHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure MQTSRKALPLALGLAIGLGAALPAWADSKAPSPQEESRRASLTRGVVAPAEQAGKTGQFR CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCC PGAVAVTLASPAFHAKKADAAAMAREYVTARAAQLGLDKAALANLVVASERADAAFTVVR CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCEEHHEE FQQRAAGLPVYDSDIAVTVAPDGRVLYVASKAVSGVAAVSSKTQAVDEQQALDRARAYLG HHHHHCCCCEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGGFVNVQSQLVAFVDGAGTHTAWKVRGRPQDSLHGDWELIIDAGSGEVLRAQDKASYAT CCCEEEHHHHEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCC DGSGLVFRPDPLSPTKSSYGSPGFKDNNDADSPQLSAARVRVTLKDLTQTSGGYKLSGPY CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCEEECCCC ASCIDFDAPLDKACPVQASTTFDFTRSNLYFEAVNAYYHIDTFLRYVNLTLGIKASPYQY CEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHEEECCCCCCHH AGGVQYDPHGQSGDDNSSYSPSSGRLSFGQGGVDDAEDADVVIHELGHGIHDWITNGGLS CCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCHH QVEGLSEGTGDYLAAAYSRDFNQWSPSDAQYHWVFNWDGHNEFWAGRVTNYNVGRTYAQI HHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEECCEECCCCCHHHHHH RNAAIHTAGQYWASCNMVARDAIGGAAMDKAFLKGLSMTNGSTNQKAAAQAVLTAAAALG HHHHHHCCHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC YSSAQLNAIGDAYNKSCTYGVTVPQKL CCCHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA