| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443688
Identifier: 126443688
GI number: 126443688
Start: 2332361
End: 2333599
Strand: Reverse
Name: 126443688
Synonym: BURPS668_A2412
Alternate gene names: NA
Gene position: 2333599-2332361 (Counterclockwise)
Preceding gene: 126443631
Following gene: 126442802
Centisome position: 74.62
GC content: 69.98
Gene sequence:
>1239_bases ATGCCGACGCCGTCTCGCGCAGGCCGCCATGGCGCTGCTCGTCGCGCGCCCGAGCGCCGTGTTGCCGAGGCATCGCGGCA TCGCAACGGCATCGCGGCCGCATCTGCACGCCGCCGGCGCTCCGCTCCGAGCGACCGCCGACGGTCGCCGACGATTACCG GTAAGCTTCTTTTCACCGCCTTGTTACGCTCCGGCCGCGGCAGGCCGATGCCGACCATGACCGACACTCCACGCTTTCGA AATCCGATCCGCAGCGAAGTCGATCTCGACGCGAACGGCAAGCATGCCGGCTATCTGCGCGTGCCGCACTCGGTCCATCG TTCGGCGTACGGATGGATTCCGGTTCCGATCGTATCGATCCGCAACGGCAGCGGCCCCGTCGTGCTCGTCATGGCGGGCA ACCACGGCGACGAGTACGAAGGGCAGATCGTCGTCTCGCGAATCGTGCGGGAGATCGACGCGCCCCATGTCCGCGGGCAA CTGATTTTCCTGCCGATGGCGAATTTCCCGGCGGCGGACGCGGGCACGCGCGTGTCGCCGATCGATGGCGGCAACCTGAA CCGCAGCTTTCCCGGCGATCCCGCCGGCGCGCCGACCGCCGTGATCGCCGACTACATCGAGCACACGCTGCTGCCGCGCG CGCAGTATCTGATCGATCTGCATTCGGGCGGCAGCTCGCTGCTCTATCAGGGCGGCAACCTGCTCGCGCTCGAGCCCCGT GACGCAGCCGAGCGCGCGCGCGTGCGCGCGCTGCTCGCCGCGTTCGGCTTGCCGCGCGCGTTCCTGCATGCGCCGAATCC GGTGCATGCGTCATCGGCCGCGCGTCGGCAGGGCGCGCTCTCGATCCTGACCGAGTTGGGCGGCGGCGGCATGTCGGACC CGGCGCTGATTCGCGACGCCCGTCGCGGCCTGCTGCATTTCCTCGGCTTCGTCGGCGCGCTGCGCGGCCCGCTCGTGCCG GACAGCCCGCCCGCGACGACGCGCTTCATGCGGGTGAGCGGCGCGCATCATTATGTGTACGCCTACGACAAGGGGCTCTA CGAGCCGCTCGTCGAGCTGGGCGCACGCGTGCGTGCGGGGCAGCCGGCCGCGCTGATCCATTTTCCCGATACGCCGCTGC GCGAACCCGTCACGCAGTGCTTCGCGAGCGACGGCGAAGTCGTGTGCAAGCGGGTGCCCGCGCAGGTGCAACGCGGCGAT TGCCTGTTCCAGCTCGCGGAAGACGACGCGCCGGCCTGA
Upstream 100 bases:
>100_bases CACGCGGCACGCGGCACGCGGCACGCGGCACGCGGCACGCGGCACGCGGCACGCGGCACGTAGTCGACACTCGTATTGCC GAATCGTTCCGGGCCTTGCG
Downstream 100 bases:
>100_bases CGGCGCGCTTGCGCGGCCAAGCTGTGCGAAAGTGGGGTGGCCGGACGAGAGAGGCGGCGGGCGGCTTGCCGCGAGCGGAA CGCGCGTCGGTGCGTCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamate Desuccinylase / Aspartoacylase Family; Deacylase; Succinylglutamatedesuccinylase/Aspartoacylase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinylglutamate Desuccinylase; Succinate Dehydrogenase Subunit
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPTPSRAGRHGAARRAPERRVAEASRHRNGIAAASARRRRSAPSDRRRSPTITGKLLFTALLRSGRGRPMPTMTDTPRFR NPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSIRNGSGPVVLVMAGNHGDEYEGQIVVSRIVREIDAPHVRGQ LIFLPMANFPAADAGTRVSPIDGGNLNRSFPGDPAGAPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGGNLLALEPR DAAERARVRALLAAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDARRGLLHFLGFVGALRGPLVP DSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAGQPAALIHFPDTPLREPVTQCFASDGEVVCKRVPAQVQRGD CLFQLAEDDAPA
Sequences:
>Translated_412_residues MPTPSRAGRHGAARRAPERRVAEASRHRNGIAAASARRRRSAPSDRRRSPTITGKLLFTALLRSGRGRPMPTMTDTPRFR NPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSIRNGSGPVVLVMAGNHGDEYEGQIVVSRIVREIDAPHVRGQ LIFLPMANFPAADAGTRVSPIDGGNLNRSFPGDPAGAPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGGNLLALEPR DAAERARVRALLAAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDARRGLLHFLGFVGALRGPLVP DSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAGQPAALIHFPDTPLREPVTQCFASDGEVVCKRVPAQVQRGD CLFQLAEDDAPA >Mature_411_residues PTPSRAGRHGAARRAPERRVAEASRHRNGIAAASARRRRSAPSDRRRSPTITGKLLFTALLRSGRGRPMPTMTDTPRFRN PIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSIRNGSGPVVLVMAGNHGDEYEGQIVVSRIVREIDAPHVRGQL IFLPMANFPAADAGTRVSPIDGGNLNRSFPGDPAGAPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGGNLLALEPRD AAERARVRALLAAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDARRGLLHFLGFVGALRGPLVPD SPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAGQPAALIHFPDTPLREPVTQCFASDGEVVCKRVPAQVQRGDC LFQLAEDDAPA
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44340; Mature: 44209
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPSRAGRHGAARRAPERRVAEASRHRNGIAAASARRRRSAPSDRRRSPTITGKLLFTA CCCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LLRSGRGRPMPTMTDTPRFRNPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSI HHHCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCEEEEE RNGSGPVVLVMAGNHGDEYEGQIVVSRIVREIDAPHVRGQLIFLPMANFPAADAGTRVSP ECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECC IDGGNLNRSFPGDPAGAPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGGNLLALEPR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCEEEECCC DAAERARVRALLAAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDA CHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RRGLLHFLGFVGALRGPLVPDSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAG HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCCC QPAALIHFPDTPLREPVTQCFASDGEVVCKRVPAQVQRGDCLFQLAEDDAPA CCEEEEECCCCCHHHHHHHHHCCCCHHHHHHCCHHHCCCCEEEEECCCCCCC >Mature Secondary Structure PTPSRAGRHGAARRAPERRVAEASRHRNGIAAASARRRRSAPSDRRRSPTITGKLLFTA CCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LLRSGRGRPMPTMTDTPRFRNPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSI HHHCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCEEEEE RNGSGPVVLVMAGNHGDEYEGQIVVSRIVREIDAPHVRGQLIFLPMANFPAADAGTRVSP ECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECC IDGGNLNRSFPGDPAGAPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGGNLLALEPR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCEEEECCC DAAERARVRALLAAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDA CHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RRGLLHFLGFVGALRGPLVPDSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAG HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCCC QPAALIHFPDTPLREPVTQCFASDGEVVCKRVPAQVQRGDCLFQLAEDDAPA CCEEEEECCCCCHHHHHHHHHCCCCHHHHHHCCHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA