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The map label for this gene is dadA2 [H]

Identifier: 126443564

GI number: 126443564

Start: 269754

End: 271001

Strand: Reverse

Name: dadA2 [H]

Synonym: BURPS668_A0305

Alternate gene names: 126443564

Gene position: 271001-269754 (Counterclockwise)

Preceding gene: 126445006

Following gene: 126444823

Centisome position: 8.67

GC content: 72.44

Gene sequence:

>1248_bases
ATGCGAATTTGCGTATTGGGCGCGGGCGTCGTCGGCCTGACGAGCGCCTATTGCCTCGCGCGGGAGGGGCATGACGTGAC
GGTGCTGGAAGCGCGCCCGGACGCCGTGCTCGACGCCAGCTTCGCGAACGGCGGACAGCTGAGCTACAGCTATGTCGCGC
CGCTCGCCGATCCGGCGGTGCTCGGCAAGCTGCCCGCGTGGCTCGCGAGGCGCGACTCGGCGCTGCGCTTCGTGCCGCGG
CTCGACGTCGATCAATGGCTGTGGTGCGCCGCGTTCCTCGCCGCGTGCCGCACCGCCCGCGCACGGCGCACCGCAGCCGA
GATGCTCGAGCTCGGCGCGCTCAGCCGCATCGCGCTGCACGCGCTCGTCGAGCGGGAAACGCTCGATTTCGACTATGCGC
GCAACGGCAAGCTCGTCGTGTACCGCGACCGGCGGGAATTCGACCGCGCGCGCCGCGCGATGGACCATCTGATCGCGGCC
GGCGCACGGCAGCAGGCGCTCGACACGGCTGCATGCGTCGCGCTGGAACCCGCGCTCGCGCCCGCGTCGGGCCTGCTCGC
GGGCGGCATTCATACGCCGTCCGAAGAAGTCGGCGATTGCCGCCGCTTCGGCATCGAGCTCGCCCGCGTGCTGCGCGAGC
GGCTTCGCGTCGCGATCCACTACGAAACGCCCGTTGATACGCTGCGCACCGAAGGCGCGACGATCGTCGCGGCGCGCACC
CCGCGCGGCGAGATCGCCGCCGACGCGTTCGTGCTGTCCGCCGGCAACGGCAGCGCGCCGATGCTGCGCCGGCTCGGCAT
GCGGCTGCCGATCTACCCGCTGACGGGCTACAGCCTGACCTTGCCCGCCCGGCACGACGCGACGCCGCGCGTGAGCGTGA
CGGACCTGCATCGCAAGATCGTCTATGCGCCGCTCGGCGCGCGCCTGCGGATCGCGGGCATGGTCGAGATCGCCGGCCTG
CGTTCGTCCGGCGCCGCGCGCCGGCTCGCCTTGCTCGCGCAACAGGCGCAAGAGATCTTTCCGCATGCGGGCGACTACGC
GCACGGCGAAACGTGGTGCGGCCATCGCCCCGCGACGCCCGACGGCAAGCCGCTGATCGGCGCGACGCCGTTCCGGAATC
TGTGGCTCAACACCGGCCACGGCGCGCTCGGCTTCACGCTCGCCTGCGGCAGCGCCCGCGTGCTCGCCGATCTGATCGCG
GGCCGCCCGCCCGCGCTGGACACCCGCGCGTATGCATTGCATCGTTGA

Upstream 100 bases:

>100_bases
CACTTGCCGCGGTCGTTTCGGTCGGCAAGACTAAAGGCCGTTCAAGCTCACACCGGCCCCCGGGCCCTCTCGACAACTTC
TTCAAGGACGGCCGGCATTC

Downstream 100 bases:

>100_bases
GCCGGCGCGCCTGCGTCTTGCCGCCGCGATCCGCACGGCGGCCGCCGCGTCGATCGGCCGCCGCCCGCCCGGCGCCGCGC
GCATGCCGATCGCGCGACCA

Product: putative D-amino acid dehydrogenase 2, small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRICVLGAGVVGLTSAYCLAREGHDVTVLEARPDAVLDASFANGGQLSYSYVAPLADPAVLGKLPAWLARRDSALRFVPR
LDVDQWLWCAAFLAACRTARARRTAAEMLELGALSRIALHALVERETLDFDYARNGKLVVYRDRREFDRARRAMDHLIAA
GARQQALDTAACVALEPALAPASGLLAGGIHTPSEEVGDCRRFGIELARVLRERLRVAIHYETPVDTLRTEGATIVAART
PRGEIAADAFVLSAGNGSAPMLRRLGMRLPIYPLTGYSLTLPARHDATPRVSVTDLHRKIVYAPLGARLRIAGMVEIAGL
RSSGAARRLALLAQQAQEIFPHAGDYAHGETWCGHRPATPDGKPLIGATPFRNLWLNTGHGALGFTLACGSARVLADLIA
GRPPALDTRAYALHR

Sequences:

>Translated_415_residues
MRICVLGAGVVGLTSAYCLAREGHDVTVLEARPDAVLDASFANGGQLSYSYVAPLADPAVLGKLPAWLARRDSALRFVPR
LDVDQWLWCAAFLAACRTARARRTAAEMLELGALSRIALHALVERETLDFDYARNGKLVVYRDRREFDRARRAMDHLIAA
GARQQALDTAACVALEPALAPASGLLAGGIHTPSEEVGDCRRFGIELARVLRERLRVAIHYETPVDTLRTEGATIVAART
PRGEIAADAFVLSAGNGSAPMLRRLGMRLPIYPLTGYSLTLPARHDATPRVSVTDLHRKIVYAPLGARLRIAGMVEIAGL
RSSGAARRLALLAQQAQEIFPHAGDYAHGETWCGHRPATPDGKPLIGATPFRNLWLNTGHGALGFTLACGSARVLADLIA
GRPPALDTRAYALHR
>Mature_415_residues
MRICVLGAGVVGLTSAYCLAREGHDVTVLEARPDAVLDASFANGGQLSYSYVAPLADPAVLGKLPAWLARRDSALRFVPR
LDVDQWLWCAAFLAACRTARARRTAAEMLELGALSRIALHALVERETLDFDYARNGKLVVYRDRREFDRARRAMDHLIAA
GARQQALDTAACVALEPALAPASGLLAGGIHTPSEEVGDCRRFGIELARVLRERLRVAIHYETPVDTLRTEGATIVAART
PRGEIAADAFVLSAGNGSAPMLRRLGMRLPIYPLTGYSLTLPARHDATPRVSVTDLHRKIVYAPLGARLRIAGMVEIAGL
RSSGAARRLALLAQQAQEIFPHAGDYAHGETWCGHRPATPDGKPLIGATPFRNLWLNTGHGALGFTLACGSARVLADLIA
GRPPALDTRAYALHR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=411, Percent_Identity=38.4428223844282, Blast_Score=284, Evalue=8e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44745; Mature: 44745

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRICVLGAGVVGLTSAYCLAREGHDVTVLEARPDAVLDASFANGGQLSYSYVAPLADPAV
CEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEECCCCCHHH
LGKLPAWLARRDSALRFVPRLDVDQWLWCAAFLAACRTARARRTAAEMLELGALSRIALH
HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVERETLDFDYARNGKLVVYRDRREFDRARRAMDHLIAAGARQQALDTAACVALEPALA
HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCC
PASGLLAGGIHTPSEEVGDCRRFGIELARVLRERLRVAIHYETPVDTLRTEGATIVAART
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHCCCCEEEEEEC
PRGEIAADAFVLSAGNGSAPMLRRLGMRLPIYPLTGYSLTLPARHDATPRVSVTDLHRKI
CCCCCEEEEEEEECCCCCCHHHHHCCCCCCEEEECCCEEECCCCCCCCCCCCHHHHHHEE
VYAPLGARLRIAGMVEIAGLRSSGAARRLALLAQQAQEIFPHAGDYAHGETWCGHRPATP
EEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DGKPLIGATPFRNLWLNTGHGALGFTLACGSARVLADLIAGRPPALDTRAYALHR
CCCCCCCCCCHHHHEEECCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MRICVLGAGVVGLTSAYCLAREGHDVTVLEARPDAVLDASFANGGQLSYSYVAPLADPAV
CEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEECCCCCHHH
LGKLPAWLARRDSALRFVPRLDVDQWLWCAAFLAACRTARARRTAAEMLELGALSRIALH
HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVERETLDFDYARNGKLVVYRDRREFDRARRAMDHLIAAGARQQALDTAACVALEPALA
HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCC
PASGLLAGGIHTPSEEVGDCRRFGIELARVLRERLRVAIHYETPVDTLRTEGATIVAART
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHCCCCEEEEEEC
PRGEIAADAFVLSAGNGSAPMLRRLGMRLPIYPLTGYSLTLPARHDATPRVSVTDLHRKI
CCCCCEEEEEEEECCCCCCHHHHHCCCCCCEEEECCCEEECCCCCCCCCCCCHHHHHHEE
VYAPLGARLRIAGMVEIAGLRSSGAARRLALLAQQAQEIFPHAGDYAHGETWCGHRPATP
EEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DGKPLIGATPFRNLWLNTGHGALGFTLACGSARVLADLIAGRPPALDTRAYALHR
CCCCCCCCCCHHHHEEECCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]