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The map label for this gene is 126443446

Identifier: 126443446

GI number: 126443446

Start: 84609

End: 84935

Strand: Reverse

Name: 126443446

Synonym: BURPS668_A0098

Alternate gene names: NA

Gene position: 84935-84609 (Counterclockwise)

Preceding gene: 126443125

Following gene: 126445466

Centisome position: 2.72

GC content: 59.33

Gene sequence:

>327_bases
ATGCTTGACTGGATAAAGGGAGAAAACATGAGTACTTATCTCGAATTGAAAGCCAAAGCCGATGAGATCCTGCGTCAGGC
AGAAGAAGCGAGACGCTCGGAACTCGAGACGGTCTTGAAGGAAGTTCGCACGCGCGTCGCGGAATACGGATTGACGCCGG
AACAGGTATTCGGCGCGCGCCGCGGGCGACGCGGCCAACAGGTGCATGCCAGTCCGACGGTTCCGAAATACCGCGACCCG
AAAACGGGAGCGACCTGGAGCGGCCGGGGGCGCGAACCGGGCTGGATCAAGGGCAAGAAACGCGAGCGCTTCCTGATTCA
GCAGTAA

Upstream 100 bases:

>100_bases
ACCCGCGCGAAGTGCAATGCGCATCGCCCGCCGGCGAAAATTCGATGTCCGGTCCCACGATATTCTTGAAAATTTCTTAT
TACCCGCTATATTGACCCCC

Downstream 100 bases:

>100_bases
ACGGCGCGCGCTGACGCGCGCCGCCTGGCGCGTCGTCGACGGGATGGTTTCAAAAAGGAGACCTGATCGTCGGCCCCTTC
ACGCGATATCGAACATCGGC

Product: H-NS histone family protein

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Hns-Like Protein; H-NS-Like Proteins; H-NS-Like Protein; HNS-Like Transcriptional Regulator; Histone-Like Nucleoid-Structuring Protein H-Ns; H-NS Histone-Like Protein; H-NS-Like Transcription Regulator; Regulatory Protein; Histone Family Protein Nucleoid-Structuring Protein H-Ns; HNS-Like Transcription Regulator Protein

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLDWIKGENMSTYLELKAKADEILRQAEEARRSELETVLKEVRTRVAEYGLTPEQVFGARRGRRGQQVHASPTVPKYRDP
KTGATWSGRGREPGWIKGKKRERFLIQQ

Sequences:

>Translated_108_residues
MLDWIKGENMSTYLELKAKADEILRQAEEARRSELETVLKEVRTRVAEYGLTPEQVFGARRGRRGQQVHASPTVPKYRDP
KTGATWSGRGREPGWIKGKKRERFLIQQ
>Mature_108_residues
MLDWIKGENMSTYLELKAKADEILRQAEEARRSELETVLKEVRTRVAEYGLTPEQVFGARRGRRGQQVHASPTVPKYRDP
KTGATWSGRGREPGWIKGKKRERFLIQQ

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12511; Mature: 12511

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDWIKGENMSTYLELKAKADEILRQAEEARRSELETVLKEVRTRVAEYGLTPEQVFGAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RGRRGQQVHASPTVPKYRDPKTGATWSGRGREPGWIKGKKRERFLIQQ
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDWIKGENMSTYLELKAKADEILRQAEEARRSELETVLKEVRTRVAEYGLTPEQVFGAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RGRRGQQVHASPTVPKYRDPKTGATWSGRGREPGWIKGKKRERFLIQQ
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA