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The map label for this gene is ycaC [H]

Identifier: 126443392

GI number: 126443392

Start: 657851

End: 658705

Strand: Reverse

Name: ycaC [H]

Synonym: BURPS668_A0687

Alternate gene names: 126443392

Gene position: 658705-657851 (Counterclockwise)

Preceding gene: 126443698

Following gene: 126445187

Centisome position: 21.06

GC content: 66.55

Gene sequence:

>855_bases
GTGCGCCGCATTTCGGCGCCGGCCGCCGGCATGCGGTCCGTCCCGCCCGCGCCGGGCGCGCCGCGCGATGCGCTCGCAAG
CGATGCGCGACGATGGGCGCGCCTTCCGCGGTCGCCTCGCACTTCTTTCGTCAATCCCGCCTTGAACGGCGTCACCCCGG
AGACTGTCATGTCCGATCCGAAGCTCGAAGTCCTCACTCCGCACAACAGCCAGTTGATCTTCATCGACCAGCAGCCGCAA
ATGGCGTTCGGCGTTCAGTCGATCGACCGCCAGACGCTGAAGAACAACGTCGTCGGCCTCGCGAAGGCCGCGAAGATCTT
CAACGTCCCGACGACGATCACGACGGTCGAATCCGAATCGTTCTCCGGCTTCACGTACCCGGAGCTGCTCGACGTGTACC
CCGATCACAAGCTGCTCGAACGCTCGTCGATGAACTCGTGGGACGACCAGAAGGTGCGCGACGCGCTGAAGGCGAACGGC
CGCAGGAAGGTCGTCGTGTCGGGGCTGTGGACCGAGGTGTGCAACACGACGTTCGCGCTGTGCGCGATGGCCGAAGGCGG
CTACGAGATCTACATGGTCGCCGACGCATCGGGCGGCACGAGCAAGGACGCGCACGACTACGCGATGCAGCGGATGATCC
AGGCGGGCGTCGTGCCCGTCACGTGGCAGCAGGTGCTGCTCGAGTGGCAGCGCGACTGGGCGCACCGCGACACGTACGAC
GCGGTGATGTCGCTCGTGAAGGAGCACTCGGGCGCATACGGGATGGGTGTCGACTACGCGTACACGATGGTTCACAAGGC
GGCGCAGCGCACCGCGAACGCGCACGACATGCTTGCGCCCGTGCCGGCGCGCTGA

Upstream 100 bases:

>100_bases
GAAGCCCACCGGACTCCTCGCCAAGTTTGCGCACTATTGTTCAAGACGGCAGGGCATTCCCCCTCTAGCATCCATCCCGC
AACGGATCGCTCGGCCCAAC

Downstream 100 bases:

>100_bases
TCCTGCTTGAGCGTTCGGGCGCGGACGCGTCGCGGCGGCGACGCGCCCGCGCGCTGGGGCGGGCCTGTGGCGAGTGCGGC
ACGTGCGGTACGCGCATGCA

Product: isochorismatase superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRRISAPAAGMRSVPPAPGAPRDALASDARRWARLPRSPRTSFVNPALNGVTPETVMSDPKLEVLTPHNSQLIFIDQQPQ
MAFGVQSIDRQTLKNNVVGLAKAAKIFNVPTTITTVESESFSGFTYPELLDVYPDHKLLERSSMNSWDDQKVRDALKANG
RRKVVVSGLWTEVCNTTFALCAMAEGGYEIYMVADASGGTSKDAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWAHRDTYD
AVMSLVKEHSGAYGMGVDYAYTMVHKAAQRTANAHDMLAPVPAR

Sequences:

>Translated_284_residues
MRRISAPAAGMRSVPPAPGAPRDALASDARRWARLPRSPRTSFVNPALNGVTPETVMSDPKLEVLTPHNSQLIFIDQQPQ
MAFGVQSIDRQTLKNNVVGLAKAAKIFNVPTTITTVESESFSGFTYPELLDVYPDHKLLERSSMNSWDDQKVRDALKANG
RRKVVVSGLWTEVCNTTFALCAMAEGGYEIYMVADASGGTSKDAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWAHRDTYD
AVMSLVKEHSGAYGMGVDYAYTMVHKAAQRTANAHDMLAPVPAR
>Mature_284_residues
MRRISAPAAGMRSVPPAPGAPRDALASDARRWARLPRSPRTSFVNPALNGVTPETVMSDPKLEVLTPHNSQLIFIDQQPQ
MAFGVQSIDRQTLKNNVVGLAKAAKIFNVPTTITTVESESFSGFTYPELLDVYPDHKLLERSSMNSWDDQKVRDALKANG
RRKVVVSGLWTEVCNTTFALCAMAEGGYEIYMVADASGGTSKDAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWAHRDTYD
AVMSLVKEHSGAYGMGVDYAYTMVHKAAQRTANAHDMLAPVPAR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=190, Percent_Identity=33.1578947368421, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 31367; Mature: 31367

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRISAPAAGMRSVPPAPGAPRDALASDARRWARLPRSPRTSFVNPALNGVTPETVMSDP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHCCC
KLEVLTPHNSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKIFNVPTTITTVESES
CEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
FSGFTYPELLDVYPDHKLLERSSMNSWDDQKVRDALKANGRRKVVVSGLWTEVCNTTFAL
CCCCCCHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH
CAMAEGGYEIYMVADASGGTSKDAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWAHRDTYD
HHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
AVMSLVKEHSGAYGMGVDYAYTMVHKAAQRTANAHDMLAPVPAR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure
MRRISAPAAGMRSVPPAPGAPRDALASDARRWARLPRSPRTSFVNPALNGVTPETVMSDP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHCCC
KLEVLTPHNSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKIFNVPTTITTVESES
CEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
FSGFTYPELLDVYPDHKLLERSSMNSWDDQKVRDALKANGRRKVVVSGLWTEVCNTTFAL
CCCCCCHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH
CAMAEGGYEIYMVADASGGTSKDAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWAHRDTYD
HHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
AVMSLVKEHSGAYGMGVDYAYTMVHKAAQRTANAHDMLAPVPAR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]