| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443285
Identifier: 126443285
GI number: 126443285
Start: 1258417
End: 1260393
Strand: Reverse
Name: 126443285
Synonym: BURPS668_A1338
Alternate gene names: NA
Gene position: 1260393-1258417 (Counterclockwise)
Preceding gene: 126445104
Following gene: 126443814
Centisome position: 40.3
GC content: 57.66
Gene sequence:
>1977_bases ATGAACACGCCGCGCAACGTCGGACTTTACCGCTCGCTATCGCAGCCAAGCCGCTGGTATCTGGGCGTCGGCATCCTTGC CCTCATGGAACTGGGGCTCGCTGGCTGCGGCGATGGCGCGAACGGTGAGTTGTCTGCCGCCAATTTCGCCGCCAGTGTGG AAACCGCCGCACCCGTCGGCCAGAATTTTCTGTATGCCACGTCGAACGAGCCCGCTCCAACGGCAACCGATCAAGCGAAT CTGGCCGACGGGTTCAATGCCTCGGTGAACGAAGCAACCAAGCTCGTCTTCTCCGATGCCAACTACAACTGGCTAAGCAC CTGGGAAGGCTGGAGCACCAATCCGGCGTGCAGCCAGAGTTCGATGGATGCCGCACTCGCCAAAGGCGGAAACAACGGCT ATCTGGCCGGCCTCCCGAACCGCTGCGCCTATTACTCGCGCGATTTCGCGCACTATCTGATCGGCGCCTACTACATGGGG TATCACTCGCAGAATCTCAACATGGCGCAGCATTTCACCCAGAACCTGCACCTGAACGCCGGACTCAACATGCCGTACTG GGCCTTTGGCACAAACGGCGGGATCTACGAGCAGAGAGACGAGCAACCCGCCGTGTTTGAAATCGGCCAGAGTCTCATGA CGCTTTACAAGCTGACCGGCGATCAGTCGTTCGTTGCCACACCGCTGAAGGACTACATCGACTATATCGACAACCAATAC TGGACCAAGACCTATTCGAACACCAACCTGCTTTACCAGAACGCGGACGGATTCCGCCTGTCACGCAACGAAACGGGCGA AACCGCCACCTACAATGAGTTTGCGTACGACCCGACGGAGGGCCAGTTCATCCCGGCGGGCTATGACATTTTCCTGGGCG CCGATTCGGCGGCCACCCAGGTTGCCTACTATTGCCAACTTGCTCAATACCCCGACTTCCTGCTCGATCCAAGCACGGCA TCAACGTATAGCAATCGCTGCTCGAACCTGAAAAGCAACTTCAATTCGCGCTGGCTGAACACCGGAGCGAACCACTTCTA CGCAGCGCTCGCTGGCGTGAAAGGCACCGTCTTTACGACCAGCAATGCGTCGCAGTTGACGTATATCGACGGTTACGTCG AAGAGCCGAACATCTACCCGCTCTACAAGAATGTCATGCTCGACGAGCAGAGCGCCGTGAACCAGGCCAAGTACGTCGAT ACCAGCGCAGAAGCCAAGTACACGAAAAACAATAATAACTACACGCCGGGCATCGAGAGCTTCACGTATCTGCCGACATC CCTCTTCAACGTTTCGGATGGGTCGGTCAATCGCTACGACAACGCCTGGAAGTGGCTGCGTCGGCTGGCCAACACGATGT CGACCAGCGAGAAAAGTGCGCCCGACGGCTACGCCAAAGTCTATCCGGAAGTACCGTTCGTGATGATCTCGGACACGATC ACGAAGGTCATCGGCCTCGATTTCGACGGTTTGCACAACAGCTTCACGACGCTCCCAAGATTGCCGTCAAACTTCACCAA TAGTCATTACGTGACGGTCCATCACGTACCGCTGTACAGCAAAAGCGCAAGTGGTTCCTACACGCTGCCCGTCGACATCA CGGTCAAGAAGGTTGCGAACCTTTACCCCTCTGATATTACCGCCTATGGAATCCAGCTCAATTTCACGAGTACGAAGCCG TGGCAGGTAACCGGCTATTCAGGAGCGCTCACGTGGACGCCTCGCTTCTCAGGCGCGAACAGCGCCACCTCCTGCGCGAT CAACATCACGTATGACGATGGCACGACGGATACCAAGACCTACCCGGCCACGCAATCGAACTTGCCGATCTATACGTGCG CCTCACCGACCGGGTCGCCAGTCACGGTCTCGATTCCGGTAGGGACGTCGGCCAGCAAGCACGTGGCGAGGGTCGTCGCC GTCATGTACAGCAGTTTGACGCCGCCGGCCGAACTGCTTAACGGCATGCCGGACTGA
Upstream 100 bases:
>100_bases TGAGAAAGATGGGGCGCCATGCATAGTAGCAAGCGATGTAATTTGCATTCCTGATTGATTGTTTGGCAATGACCTTCCCT TCATCCAAGGAGAATTAAAA
Downstream 100 bases:
>100_bases AGCACAACCTGAGGGCGCCGATGCGGCCACACGGAACCGCGCCGGGAATCGTGGAAGCCGGTTGGTTTAAGTTAATGCAG GCACGTCAGCAGCATTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MNTPRNVGLYRSLSQPSRWYLGVGILALMELGLAGCGDGANGELSAANFAASVETAAPVGQNFLYATSNEPAPTATDQAN LADGFNASVNEATKLVFSDANYNWLSTWEGWSTNPACSQSSMDAALAKGGNNGYLAGLPNRCAYYSRDFAHYLIGAYYMG YHSQNLNMAQHFTQNLHLNAGLNMPYWAFGTNGGIYEQRDEQPAVFEIGQSLMTLYKLTGDQSFVATPLKDYIDYIDNQY WTKTYSNTNLLYQNADGFRLSRNETGETATYNEFAYDPTEGQFIPAGYDIFLGADSAATQVAYYCQLAQYPDFLLDPSTA STYSNRCSNLKSNFNSRWLNTGANHFYAALAGVKGTVFTTSNASQLTYIDGYVEEPNIYPLYKNVMLDEQSAVNQAKYVD TSAEAKYTKNNNNYTPGIESFTYLPTSLFNVSDGSVNRYDNAWKWLRRLANTMSTSEKSAPDGYAKVYPEVPFVMISDTI TKVIGLDFDGLHNSFTTLPRLPSNFTNSHYVTVHHVPLYSKSASGSYTLPVDITVKKVANLYPSDITAYGIQLNFTSTKP WQVTGYSGALTWTPRFSGANSATSCAINITYDDGTTDTKTYPATQSNLPIYTCASPTGSPVTVSIPVGTSASKHVARVVA VMYSSLTPPAELLNGMPD
Sequences:
>Translated_658_residues MNTPRNVGLYRSLSQPSRWYLGVGILALMELGLAGCGDGANGELSAANFAASVETAAPVGQNFLYATSNEPAPTATDQAN LADGFNASVNEATKLVFSDANYNWLSTWEGWSTNPACSQSSMDAALAKGGNNGYLAGLPNRCAYYSRDFAHYLIGAYYMG YHSQNLNMAQHFTQNLHLNAGLNMPYWAFGTNGGIYEQRDEQPAVFEIGQSLMTLYKLTGDQSFVATPLKDYIDYIDNQY WTKTYSNTNLLYQNADGFRLSRNETGETATYNEFAYDPTEGQFIPAGYDIFLGADSAATQVAYYCQLAQYPDFLLDPSTA STYSNRCSNLKSNFNSRWLNTGANHFYAALAGVKGTVFTTSNASQLTYIDGYVEEPNIYPLYKNVMLDEQSAVNQAKYVD TSAEAKYTKNNNNYTPGIESFTYLPTSLFNVSDGSVNRYDNAWKWLRRLANTMSTSEKSAPDGYAKVYPEVPFVMISDTI TKVIGLDFDGLHNSFTTLPRLPSNFTNSHYVTVHHVPLYSKSASGSYTLPVDITVKKVANLYPSDITAYGIQLNFTSTKP WQVTGYSGALTWTPRFSGANSATSCAINITYDDGTTDTKTYPATQSNLPIYTCASPTGSPVTVSIPVGTSASKHVARVVA VMYSSLTPPAELLNGMPD >Mature_658_residues MNTPRNVGLYRSLSQPSRWYLGVGILALMELGLAGCGDGANGELSAANFAASVETAAPVGQNFLYATSNEPAPTATDQAN LADGFNASVNEATKLVFSDANYNWLSTWEGWSTNPACSQSSMDAALAKGGNNGYLAGLPNRCAYYSRDFAHYLIGAYYMG YHSQNLNMAQHFTQNLHLNAGLNMPYWAFGTNGGIYEQRDEQPAVFEIGQSLMTLYKLTGDQSFVATPLKDYIDYIDNQY WTKTYSNTNLLYQNADGFRLSRNETGETATYNEFAYDPTEGQFIPAGYDIFLGADSAATQVAYYCQLAQYPDFLLDPSTA STYSNRCSNLKSNFNSRWLNTGANHFYAALAGVKGTVFTTSNASQLTYIDGYVEEPNIYPLYKNVMLDEQSAVNQAKYVD TSAEAKYTKNNNNYTPGIESFTYLPTSLFNVSDGSVNRYDNAWKWLRRLANTMSTSEKSAPDGYAKVYPEVPFVMISDTI TKVIGLDFDGLHNSFTTLPRLPSNFTNSHYVTVHHVPLYSKSASGSYTLPVDITVKKVANLYPSDITAYGIQLNFTSTKP WQVTGYSGALTWTPRFSGANSATSCAINITYDDGTTDTKTYPATQSNLPIYTCASPTGSPVTVSIPVGTSASKHVARVVA VMYSSLTPPAELLNGMPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72013; Mature: 72013
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPRNVGLYRSLSQPSRWYLGVGILALMELGLAGCGDGANGELSAANFAASVETAAPVG CCCCCCCCHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHCHHCCCCC QNFLYATSNEPAPTATDQANLADGFNASVNEATKLVFSDANYNWLSTWEGWSTNPACSQS CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCH SMDAALAKGGNNGYLAGLPNRCAYYSRDFAHYLIGAYYMGYHSQNLNMAQHFTQNLHLNA HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCEEEEC GLNMPYWAFGTNGGIYEQRDEQPAVFEIGQSLMTLYKLTGDQSFVATPLKDYIDYIDNQY CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCE WTKTYSNTNLLYQNADGFRLSRNETGETATYNEFAYDPTEGQFIPAGYDIFLGADSAATQ EEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCHHHHH VAYYCQLAQYPDFLLDPSTASTYSNRCSNLKSNFNSRWLNTGANHFYAALAGVKGTVFTT HHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCEEEEEC SNASQLTYIDGYVEEPNIYPLYKNVMLDEQSAVNQAKYVDTSAEAKYTKNNNNYTPGIES CCCCEEEEEECEECCCCEEEEHHHHEECCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC FTYLPTSLFNVSDGSVNRYDNAWKWLRRLANTMSTSEKSAPDGYAKVYPEVPFVMISDTI EEECCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCCEEEEHHHH TKVIGLDFDGLHNSFTTLPRLPSNFTNSHYVTVHHVPLYSKSASGSYTLPVDITVKKVAN HHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEHHHHHC LYPSDITAYGIQLNFTSTKPWQVTGYSGALTWTPRFSGANSATSCAINITYDDGTTDTKT CCCCCEEEEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCEE YPATQSNLPIYTCASPTGSPVTVSIPVGTSASKHVARVVAVMYSSLTPPAELLNGMPD CCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCC >Mature Secondary Structure MNTPRNVGLYRSLSQPSRWYLGVGILALMELGLAGCGDGANGELSAANFAASVETAAPVG CCCCCCCCHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHCHHCCCCC QNFLYATSNEPAPTATDQANLADGFNASVNEATKLVFSDANYNWLSTWEGWSTNPACSQS CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCH SMDAALAKGGNNGYLAGLPNRCAYYSRDFAHYLIGAYYMGYHSQNLNMAQHFTQNLHLNA HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCEEEEC GLNMPYWAFGTNGGIYEQRDEQPAVFEIGQSLMTLYKLTGDQSFVATPLKDYIDYIDNQY CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCE WTKTYSNTNLLYQNADGFRLSRNETGETATYNEFAYDPTEGQFIPAGYDIFLGADSAATQ EEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCHHHHH VAYYCQLAQYPDFLLDPSTASTYSNRCSNLKSNFNSRWLNTGANHFYAALAGVKGTVFTT HHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCEEEEEC SNASQLTYIDGYVEEPNIYPLYKNVMLDEQSAVNQAKYVDTSAEAKYTKNNNNYTPGIES CCCCEEEEEECEECCCCEEEEHHHHEECCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCC FTYLPTSLFNVSDGSVNRYDNAWKWLRRLANTMSTSEKSAPDGYAKVYPEVPFVMISDTI EEECCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCCEEEEHHHH TKVIGLDFDGLHNSFTTLPRLPSNFTNSHYVTVHHVPLYSKSASGSYTLPVDITVKKVAN HHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEHHHHHC LYPSDITAYGIQLNFTSTKPWQVTGYSGALTWTPRFSGANSATSCAINITYDDGTTDTKT CCCCCEEEEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCEE YPATQSNLPIYTCASPTGSPVTVSIPVGTSASKHVARVVAVMYSSLTPPAELLNGMPD CCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA